RNA–Protein interactions for RNA: ENST00000249837.7

VPS13C-201, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VPS13C, Length 13,300 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-201ENST00000249837 GMNNO75496 209 aa4.85□□□□□ -1.63
VPS13C-201ENST00000249837 FGRP09769 529 aa4.85□□□□□ -1.63
VPS13C-201ENST00000249837 GNAT1P11488 350 aa4.85□□□□□ -1.63
VPS13C-201ENST00000249837 KRT3P12035 628 aa4.85□□□□□ -1.63
VPS13C-201ENST00000249837 GZMAP12544 262 aa4.85□□□□□ -1.63
VPS13C-201ENST00000249837 SFNP31947 248 aa4.85□□□□□ -1.63
VPS13C-201ENST00000249837 ELF3P78545 371 aaPredicted RBP4.85□□□□□ -1.63
VPS13C-201ENST00000249837 FAM47CQ5HY64 1035 aa4.85□□□□□ -1.63
VPS13C-201ENST00000249837 ERMARDQ5T6L9 678 aa4.85□□□□□ -1.63
VPS13C-201ENST00000249837 RYBPQ8N488 228 aaPredicted RBP4.85□□□□□ -1.63
VPS13C-201ENST00000249837 ZDHHC15Q96MV8 337 aa4.85□□□□□ -1.63
VPS13C-201ENST00000249837 TMEM121Q9BTD3 319 aa4.85□□□□□ -1.63
VPS13C-201ENST00000249837 AGAP1Q9UPQ3 857 aa4.85□□□□□ -1.63
VPS13C-201ENST00000249837 ATF5Q9Y2D1 282 aaPredicted RBP4.85□□□□□ -1.63
VPS13C-201ENST00000249837 SSX2IPQ9Y2D8 614 aa4.85□□□□□ -1.63
VPS13C-201ENST00000249837 C15orf41Q9Y2V0 281 aa4.85□□□□□ -1.63
VPS13C-201ENST00000249837 GTPBP10A4D1E9 387 aaKnown RBP4.84□□□□□ -1.63
VPS13C-201ENST00000249837 SNRPAP09012 282 aaKnown RBP4.84□□□□□ -1.63
VPS13C-201ENST00000249837 ETS1P14921 441 aa4.84□□□□□ -1.63
VPS13C-201ENST00000249837 GTF2H1P32780 548 aa4.84□□□□□ -1.63
VPS13C-201ENST00000249837 CRYMQ14894 314 aa4.84□□□□□ -1.63
VPS13C-201ENST00000249837 Q4G0T1 1027 aa4.84□□□□□ -1.63
VPS13C-201ENST00000249837 PCNX4Q63HM2 1172 aa4.84□□□□□ -1.63
VPS13C-201ENST00000249837 TTLL6Q8N841 843 aa4.84□□□□□ -1.63
VPS13C-201ENST00000249837 FAM151AQ8WW52 585 aa4.84□□□□□ -1.63
VPS13C-201ENST00000249837 CENPKQ9BS16 269 aa4.84□□□□□ -1.63
VPS13C-201ENST00000249837 TRPV6Q9H1D0 765 aa4.84□□□□□ -1.63
VPS13C-201ENST00000249837 ACAD9Q9H845 621 aa4.84□□□□□ -1.63
VPS13C-201ENST00000249837 KLHL8Q9P2G9 620 aaPredicted RBP4.84□□□□□ -1.63
VPS13C-201ENST00000249837 IVNS1ABPQ9Y6Y0 642 aa4.84□□□□□ -1.63
VPS13C-201ENST00000249837 IL1R1P14778 569 aa4.84□□□□□ -1.63
VPS13C-201ENST00000249837 KCNA3P22001 575 aa4.84□□□□□ -1.63
VPS13C-201ENST00000249837 NFX1Q12986 1120 aaKnown RBP4.84□□□□□ -1.63
VPS13C-201ENST00000249837 PRPF39Q86UA1 669 aaKnown RBP4.84□□□□□ -1.63
VPS13C-201ENST00000249837 SH3GL2Q99962 352 aa4.84□□□□□ -1.63
VPS13C-201ENST00000249837 GTSE1Q9NYZ3 720 aa4.84□□□□□ -1.63
VPS13C-201ENST00000249837 TUBGCP6Q96RT7 1819 aa4.84□□□□□ -1.63
VPS13C-201ENST00000249837 LRRC37A3O60309 1634 aa4.84□□□□□ -1.63
VPS13C-201ENST00000249837 CES2O00748 559 aa4.84□□□□□ -1.63
VPS13C-201ENST00000249837 KIF1CO43896 1103 aaKnown RBP4.84□□□□□ -1.63
VPS13C-201ENST00000249837 GCLCP48506 637 aaPredicted RBP4.84□□□□□ -1.63
VPS13C-201ENST00000249837 RARRES1P49788 294 aa4.84□□□□□ -1.63
VPS13C-201ENST00000249837 DLG4P78352 724 aa4.84□□□□□ -1.63
VPS13C-201ENST00000249837 OTUD4Q01804 1114 aaKnown RBP4.84□□□□□ -1.63
VPS13C-201ENST00000249837 SLC35G1Q2M3R5 365 aa4.84□□□□□ -1.63
VPS13C-201ENST00000249837 XKR3Q5GH77 459 aa4.84□□□□□ -1.63
VPS13C-201ENST00000249837 MROH9Q5TGP6 573 aa4.84□□□□□ -1.63
VPS13C-201ENST00000249837 SV2AQ7L0J3 742 aa4.84□□□□□ -1.63
VPS13C-201ENST00000249837 OTOP1Q7RTM1 612 aa4.84□□□□□ -1.63
VPS13C-201ENST00000249837 MANSC1Q9H8J5 431 aa4.84□□□□□ -1.63
VPS13C-201ENST00000249837 PCDHA3Q9Y5H8 950 aa4.84□□□□□ -1.63
VPS13C-201ENST00000249837 GIPC1O14908 333 aa4.84□□□□□ -1.63
VPS13C-201ENST00000249837 MAP3K6O95382 1288 aa4.84□□□□□ -1.63
VPS13C-201ENST00000249837 LDHAP00338 332 aaKnown RBP4.84□□□□□ -1.63
VPS13C-201ENST00000249837 STAT5BP51692 787 aa4.84□□□□□ -1.63
VPS13C-201ENST00000249837 AP2B1P63010 937 aa4.84□□□□□ -1.63
VPS13C-201ENST00000249837 AP1B1Q10567 949 aa4.84□□□□□ -1.63
VPS13C-201ENST00000249837 SUPT20HL1Q3ZLR7 823 aa4.84□□□□□ -1.63
VPS13C-201ENST00000249837 ATP13A4Q4VNC1 1196 aa4.84□□□□□ -1.63
VPS13C-201ENST00000249837 MFSD7Q6UXD7 560 aa4.84□□□□□ -1.63
VPS13C-201ENST00000249837 SIX6OS1Q8N1H7 587 aa4.84□□□□□ -1.63
VPS13C-201ENST00000249837 AGAP3Q96P47 875 aa4.84□□□□□ -1.63
VPS13C-201ENST00000249837 SHCBP1LQ9BZQ2 653 aa4.84□□□□□ -1.63
VPS13C-201ENST00000249837 FNDC3AQ9Y2H6 1198 aaKnown RBP4.84□□□□□ -1.63
VPS13C-201ENST00000249837 ASTN1O14525 1302 aa4.84□□□□□ -1.63
VPS13C-201ENST00000249837 NID2Q14112 1375 aa4.84□□□□□ -1.63
VPS13C-201ENST00000249837 NEMP1O14524 444 aa4.84□□□□□ -1.63
VPS13C-201ENST00000249837 TGFB1I1O43294 461 aa4.84□□□□□ -1.63
VPS13C-201ENST00000249837 PRKCBP05771 671 aa4.84□□□□□ -1.63
VPS13C-201ENST00000249837 ATXN3P54252 364 aaPredicted RBP4.84□□□□□ -1.63
VPS13C-201ENST00000249837 THOC5Q13769 683 aaKnown RBP4.84□□□□□ -1.63
VPS13C-201ENST00000249837 KCTD2Q14681 263 aa4.84□□□□□ -1.63
VPS13C-201ENST00000249837 MOXD1Q6UVY6 613 aa4.84□□□□□ -1.63
VPS13C-201ENST00000249837 PALB2Q86YC2 1186 aa4.84□□□□□ -1.63
VPS13C-201ENST00000249837 CERS5Q8N5B7 392 aa4.84□□□□□ -1.63
VPS13C-201ENST00000249837 RNF149Q8NC42 400 aa4.84□□□□□ -1.63
VPS13C-201ENST00000249837 PURBQ96QR8 312 aaKnown RBP4.84□□□□□ -1.63
VPS13C-201ENST00000249837 METTL5Q9NRN9 209 aaKnown RBP4.84□□□□□ -1.63
VPS13C-201ENST00000249837 FAM49BQ9NUQ9 324 aa4.84□□□□□ -1.63
VPS13C-201ENST00000249837 AFG3L2Q9Y4W6 797 aa4.84□□□□□ -1.63
VPS13C-201ENST00000249837 CBX6O95503 412 aa4.84□□□□□ -1.63
VPS13C-201ENST00000249837 NR3C2P08235 984 aa4.84□□□□□ -1.63
VPS13C-201ENST00000249837 RANBP1P43487 201 aa4.84□□□□□ -1.63
VPS13C-201ENST00000249837 ACCSLQ4AC99 568 aa4.84□□□□□ -1.63
VPS13C-201ENST00000249837 ASNSD1Q9NWL6 643 aa4.84□□□□□ -1.63
VPS13C-201ENST00000249837 ADORA2BP29275 332 aa4.84□□□□□ -1.63
VPS13C-201ENST00000249837 BTKQ06187 659 aa4.84□□□□□ -1.63
VPS13C-201ENST00000249837 SPOCD1Q6ZMY3 1216 aa4.84□□□□□ -1.63
VPS13C-201ENST00000249837 NDUFAF2Q8N183 169 aa4.84□□□□□ -1.63
VPS13C-201ENST00000249837 ACTL9Q8TC94 416 aa4.84□□□□□ -1.63
VPS13C-201ENST00000249837 GMCL1Q96IK5 515 aa4.84□□□□□ -1.63
VPS13C-201ENST00000249837 MTMR12Q9C0I1 747 aa4.84□□□□□ -1.63
VPS13C-201ENST00000249837 SENP1Q9P0U3 644 aa4.84□□□□□ -1.63
VPS13C-201ENST00000249837 APOL1O14791 398 aa4.84□□□□□ -1.63
VPS13C-201ENST00000249837 ENTPD3O75355 529 aa4.84□□□□□ -1.63
VPS13C-201ENST00000249837 KRT38O76015 456 aa4.84□□□□□ -1.63
VPS13C-201ENST00000249837 TYK2P29597 1187 aa4.84□□□□□ -1.63
VPS13C-201ENST00000249837 MYL6P60660 151 aa4.84□□□□□ -1.63
VPS13C-201ENST00000249837 ARID3BQ8IVW6 561 aaPredicted RBP4.84□□□□□ -1.63
VPS13C-201ENST00000249837 PPIL6Q8IXY8 311 aa4.84□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms