RNA–Protein interactions for RNA: ENST00000246868.6

SBDS-201, Transcript of SBDS, ribosome maturation factor, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SBDS, Length 1,631 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBDS-201ENST00000246868 SLC9A7Q96T83 725 aa20.47■□□□□ 0.87
SBDS-201ENST00000246868 AGPAT1Q99943 283 aa20.47■□□□□ 0.87
SBDS-201ENST00000246868 MRPL45Q9BRJ2 306 aaKnown RBP20.47■□□□□ 0.87
SBDS-201ENST00000246868 ZBED2Q9BTP6 218 aa20.47■□□□□ 0.87
SBDS-201ENST00000246868 TNFAIP3P21580 790 aa20.46■□□□□ 0.87
SBDS-201ENST00000246868 WARSP23381 471 aaKnown RBP20.46■□□□□ 0.87
SBDS-201ENST00000246868 GNL1P36915 607 aaPredicted RBP20.46■□□□□ 0.87
SBDS-201ENST00000246868 BMS1Q14692 1282 aaKnown RBP20.46■□□□□ 0.87
SBDS-201ENST00000246868 MTF1Q14872 753 aa20.46■□□□□ 0.87
SBDS-201ENST00000246868 SPA17Q15506 151 aa20.46■□□□□ 0.87
SBDS-201ENST00000246868 TMCO2Q7Z6W1 182 aaPredicted RBP20.46■□□□□ 0.87
SBDS-201ENST00000246868 METTL23Q86XA0 190 aa20.46■□□□□ 0.87
SBDS-201ENST00000246868 SPATA18Q8TC71 538 aa20.46■□□□□ 0.87
SBDS-201ENST00000246868 TMEM176AQ96HP8 235 aa20.46■□□□□ 0.87
SBDS-201ENST00000246868 SUSD3Q96L08 255 aa20.46■□□□□ 0.87
SBDS-201ENST00000246868 SEPT11Q9NVA2 429 aaKnown RBP20.46■□□□□ 0.87
SBDS-201ENST00000246868 A8MXQ7 604 aa20.45■□□□□ 0.87
SBDS-201ENST00000246868 GJB5O95377 273 aa20.45■□□□□ 0.87
SBDS-201ENST00000246868 BRCC3P46736 316 aa20.45■□□□□ 0.87
SBDS-201ENST00000246868 LHX1P48742 406 aa20.45■□□□□ 0.87
SBDS-201ENST00000246868 SLC11A1P49279 550 aa20.45■□□□□ 0.87
SBDS-201ENST00000246868 RAD23BP54727 409 aa20.45■□□□□ 0.87
SBDS-201ENST00000246868 BCAR1P56945 870 aa20.45■□□□□ 0.87
SBDS-201ENST00000246868 CDR2Q01850 454 aa20.45■□□□□ 0.87
SBDS-201ENST00000246868 WSCD1Q658N2 575 aa20.45■□□□□ 0.87
SBDS-201ENST00000246868 NOP9Q86U38 636 aaKnown RBP20.45■□□□□ 0.87
SBDS-201ENST00000246868 PHOSPHO2Q8TCD6 241 aa20.45■□□□□ 0.87
SBDS-201ENST00000246868 PDCL3Q9H2J4 239 aa20.45■□□□□ 0.87
SBDS-201ENST00000246868 RC3H2Q9HBD1 1191 aaKnown RBP20.45■□□□□ 0.87
SBDS-201ENST00000246868 LUC7LQ9NQ29 371 aaKnown RBP20.45■□□□□ 0.87
SBDS-201ENST00000246868 CXXC1Q9P0U4 656 aaPredicted RBP20.45■□□□□ 0.87
SBDS-201ENST00000246868 ADAMTS1Q9UHI8 967 aa20.45■□□□□ 0.87
SBDS-201ENST00000246868 NOCTQ9UK39 431 aaKnown RBP20.45■□□□□ 0.87
SBDS-201ENST00000246868 ADAM28Q9UKQ2 775 aa20.45■□□□□ 0.87
SBDS-201ENST00000246868 PYCARDQ9ULZ3 195 aa20.45■□□□□ 0.87
SBDS-201ENST00000246868 EIF3CLB5ME19 914 aaKnown RBP20.45■□□□□ 0.86
SBDS-201ENST00000246868 M0QZQ0 153 aa20.45■□□□□ 0.86
SBDS-201ENST00000246868 THAP12O43422 761 aa20.45■□□□□ 0.86
SBDS-201ENST00000246868 ITGB1P05556 798 aa20.45■□□□□ 0.86
SBDS-201ENST00000246868 GALTP07902 379 aa20.45■□□□□ 0.86
SBDS-201ENST00000246868 CD19P15391 556 aa20.45■□□□□ 0.86
SBDS-201ENST00000246868 IGFBP6P24592 240 aaPredicted RBP20.45■□□□□ 0.86
SBDS-201ENST00000246868 KRT83P78385 493 aa20.45■□□□□ 0.86
SBDS-201ENST00000246868 ELAVL2Q12926 359 aaKnown RBP20.45■□□□□ 0.86
SBDS-201ENST00000246868 SLC18A3Q16572 532 aa20.45■□□□□ 0.86
SBDS-201ENST00000246868 TAF3Q5VWG9 929 aa20.45■□□□□ 0.86
SBDS-201ENST00000246868 CD300LGQ6UXG3 332 aa20.45■□□□□ 0.86
SBDS-201ENST00000246868 ZSCAN30Q86W11 494 aa20.45■□□□□ 0.86
SBDS-201ENST00000246868 SLC20A1Q8WUM9 679 aa20.45■□□□□ 0.86
SBDS-201ENST00000246868 KBTBD7Q8WVZ9 684 aa20.45■□□□□ 0.86
SBDS-201ENST00000246868 HEXIM2Q96MH2 286 aaKnown RBP20.45■□□□□ 0.86
SBDS-201ENST00000246868 EIF3CQ99613 913 aaKnown RBP20.45■□□□□ 0.86
SBDS-201ENST00000246868 ELOVL4Q9GZR5 314 aa20.45■□□□□ 0.86
SBDS-201ENST00000246868 ACP6Q9NPH0 428 aa20.45■□□□□ 0.86
SBDS-201ENST00000246868 KIAA1257Q9ULG3 409 aa20.45■□□□□ 0.86
SBDS-201ENST00000246868 I3L4J1 428 aa20.44■□□□□ 0.86
SBDS-201ENST00000246868 MED7O43513 233 aa20.44■□□□□ 0.86
SBDS-201ENST00000246868 ATP2A2P16615 1042 aaKnown RBP20.44■□□□□ 0.86
SBDS-201ENST00000246868 ASTE1Q2TB18 679 aaPredicted RBP20.44■□□□□ 0.86
SBDS-201ENST00000246868 GLYCTKQ8IVS8 523 aa20.44■□□□□ 0.86
SBDS-201ENST00000246868 SLC4A11Q8NBS3 891 aa20.44■□□□□ 0.86
SBDS-201ENST00000246868 WHAMMQ8TF30 809 aa20.44■□□□□ 0.86
SBDS-201ENST00000246868 TNIP3Q96KP6 325 aa20.44■□□□□ 0.86
SBDS-201ENST00000246868 CWH43Q9H720 699 aa20.44■□□□□ 0.86
SBDS-201ENST00000246868 SPTLC3Q9NUV7 552 aa20.44■□□□□ 0.86
SBDS-201ENST00000246868 HCSTQ9UBK5 93 aa20.44■□□□□ 0.86
SBDS-201ENST00000246868 HMGXB4Q9UGU5 601 aa20.44■□□□□ 0.86
SBDS-201ENST00000246868 PCDHB8Q9UN66 801 aa20.44■□□□□ 0.86
SBDS-201ENST00000246868 STXBP5LQ9Y2K9 1186 aa20.44■□□□□ 0.86
SBDS-201ENST00000246868 INSL6Q9Y581 213 aa20.44■□□□□ 0.86
SBDS-201ENST00000246868 SF3B1O75533 1304 aaKnown RBP eCLIP20.44■□□□□ 0.86
SBDS-201ENST00000246868 PTPRSQ13332 1948 aa20.43■□□□□ 0.86
SBDS-201ENST00000246868 F8W810 466 aa20.43■□□□□ 0.86
SBDS-201ENST00000246868 CYP11A1P05108 521 aa20.43■□□□□ 0.86
SBDS-201ENST00000246868 CCDC175P0C221 793 aa20.43■□□□□ 0.86
SBDS-201ENST00000246868 LAG3P18627 525 aa20.43■□□□□ 0.86
SBDS-201ENST00000246868 TYMPP19971 482 aa20.43■□□□□ 0.86
SBDS-201ENST00000246868 GFPT1Q06210 699 aaPredicted RBP20.43■□□□□ 0.86
SBDS-201ENST00000246868 TOGARAM2Q6ZUX3 1019 aa20.43■□□□□ 0.86
SBDS-201ENST00000246868 ZNF606Q8WXB4 792 aa20.43■□□□□ 0.86
SBDS-201ENST00000246868 ZNF558Q96NG5 402 aa20.43■□□□□ 0.86
SBDS-201ENST00000246868 TWNKQ96RR1 684 aa20.43■□□□□ 0.86
SBDS-201ENST00000246868 SYT11Q9BT88 431 aa20.43■□□□□ 0.86
SBDS-201ENST00000246868 COL4A6Q14031 1691 aa20.43■□□□□ 0.86
SBDS-201ENST00000246868 CEP290O15078 2479 aa20.42■□□□□ 0.86
SBDS-201ENST00000246868 A0A087X0T9 212 aa20.42■□□□□ 0.86
SBDS-201ENST00000246868 GABRDO14764 452 aa20.42■□□□□ 0.86
SBDS-201ENST00000246868 CCP110O43303 1012 aa20.42■□□□□ 0.86
SBDS-201ENST00000246868 ZSCAN12O43309 604 aa20.42■□□□□ 0.86
SBDS-201ENST00000246868 MMEP08473 750 aa20.42■□□□□ 0.86
SBDS-201ENST00000246868 PDGFRBP09619 1106 aa20.42■□□□□ 0.86
SBDS-201ENST00000246868 FAM228BP0C875 321 aa20.42■□□□□ 0.86
SBDS-201ENST00000246868 VDRP11473 427 aa20.42■□□□□ 0.86
SBDS-201ENST00000246868 MSNP26038 577 aaKnown RBP20.42■□□□□ 0.86
SBDS-201ENST00000246868 PCSK1P29120 753 aa20.42■□□□□ 0.86
SBDS-201ENST00000246868 HTRA4P83105 476 aaPredicted RBP20.42■□□□□ 0.86
SBDS-201ENST00000246868 ORC1Q13415 861 aa20.42■□□□□ 0.86
SBDS-201ENST00000246868 SGO2Q562F6 1265 aa20.42■□□□□ 0.86
SBDS-201ENST00000246868 HERC6Q8IVU3 1022 aa20.42■□□□□ 0.86
SBDS-201ENST00000246868 TXLNBQ8N3L3 684 aa20.42■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms