RNA–Protein interactions for RNA: ENST00000243108.4

HOXC6-201, Transcript of homeobox C6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC6, Length 1,733 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6-201ENST00000243108 NUCKS1Q9H1E3 243 aaKnown RBP18.69■□□□□ 0.58
HOXC6-201ENST00000243108 NHEJ1Q9H9Q4 299 aaPredicted RBP18.69■□□□□ 0.58
HOXC6-201ENST00000243108 A0A0U1RQJ8 604 aa18.69■□□□□ 0.58
HOXC6-201ENST00000243108 GTPBP10A4D1E9 387 aaKnown RBP18.69■□□□□ 0.58
HOXC6-201ENST00000243108 TADA2AO75478 443 aa18.69■□□□□ 0.58
HOXC6-201ENST00000243108 RPL17P18621 184 aaKnown RBP18.69■□□□□ 0.58
HOXC6-201ENST00000243108 GRM5P41594 1212 aa18.69■□□□□ 0.58
HOXC6-201ENST00000243108 ARHGAP25P42331 645 aa18.69■□□□□ 0.58
HOXC6-201ENST00000243108 GNG11P61952 73 aa18.69■□□□□ 0.58
HOXC6-201ENST00000243108 SNRPFP62306 86 aaKnown RBP18.69■□□□□ 0.58
HOXC6-201ENST00000243108 USP41Q3LFD5 358 aa18.69■□□□□ 0.58
HOXC6-201ENST00000243108 ZNF568Q3ZCX4 644 aa18.69■□□□□ 0.58
HOXC6-201ENST00000243108 XKR4Q5GH76 650 aa18.69■□□□□ 0.58
HOXC6-201ENST00000243108 DPY19L2P1Q6NXN4 242 aa18.69■□□□□ 0.58
HOXC6-201ENST00000243108 PRSS55Q6UWB4 352 aaPredicted RBP18.69■□□□□ 0.58
HOXC6-201ENST00000243108 ZNF662Q6ZS27 426 aa18.69■□□□□ 0.58
HOXC6-201ENST00000243108 HAUS6Q7Z4H7 955 aa18.69■□□□□ 0.58
HOXC6-201ENST00000243108 ATRIPQ8WXE1 791 aa18.69■□□□□ 0.58
HOXC6-201ENST00000243108 HVCN1Q96D96 273 aa18.69■□□□□ 0.58
HOXC6-201ENST00000243108 HAPLN2Q9GZV7 340 aa18.69■□□□□ 0.58
HOXC6-201ENST00000243108 GANQ9H2C0 597 aa18.69■□□□□ 0.58
HOXC6-201ENST00000243108 GOLGA2P5Q9HBQ8 144 aa18.69■□□□□ 0.58
HOXC6-201ENST00000243108 PLCB1Q9NQ66 1216 aa18.69■□□□□ 0.58
HOXC6-201ENST00000243108 DOCK6Q96HP0 2047 aa18.68■□□□□ 0.58
HOXC6-201ENST00000243108 LRRC53A6NM62 1247 aa18.68■□□□□ 0.58
HOXC6-201ENST00000243108 EIF3CLB5ME19 914 aaKnown RBP18.68■□□□□ 0.58
HOXC6-201ENST00000243108 SPATA31D3P0C874 917 aa18.68■□□□□ 0.58
HOXC6-201ENST00000243108 SOX4Q06945 474 aaPredicted RBP18.68■□□□□ 0.58
HOXC6-201ENST00000243108 KIAA1841Q6NSI8 718 aa18.68■□□□□ 0.58
HOXC6-201ENST00000243108 SPATA31D4Q6ZUB0 917 aa18.68■□□□□ 0.58
HOXC6-201ENST00000243108 RRAGAQ7L523 313 aa18.68■□□□□ 0.58
HOXC6-201ENST00000243108 SYCP3Q8IZU3 236 aa18.68■□□□□ 0.58
HOXC6-201ENST00000243108 RIN2Q8WYP3 895 aaPredicted RBP18.68■□□□□ 0.58
HOXC6-201ENST00000243108 ZMAT2Q96NC0 199 aaKnown RBP18.68■□□□□ 0.58
HOXC6-201ENST00000243108 WDR24Q96S15 920 aa18.68■□□□□ 0.58
HOXC6-201ENST00000243108 EIF3CQ99613 913 aaKnown RBP18.68■□□□□ 0.58
HOXC6-201ENST00000243108 MAN1C1Q9NR34 630 aa18.68■□□□□ 0.58
HOXC6-201ENST00000243108 SMIM28A0A1B0GU29 152 aa18.67■□□□□ 0.58
HOXC6-201ENST00000243108 PRR33A8MZF0 331 aa18.67■□□□□ 0.58
HOXC6-201ENST00000243108 C2CD4DB7Z1M9 353 aa18.67■□□□□ 0.58
HOXC6-201ENST00000243108 KRT83P78385 493 aa18.67■□□□□ 0.58
HOXC6-201ENST00000243108 SEZ6Q53EL9 994 aa18.67■□□□□ 0.58
HOXC6-201ENST00000243108 MPZL3Q6UWV2 235 aa18.67■□□□□ 0.58
HOXC6-201ENST00000243108 CACNA2D4Q7Z3S7 1137 aa18.67■□□□□ 0.58
HOXC6-201ENST00000243108 PALB2Q86YC2 1186 aa18.67■□□□□ 0.58
HOXC6-201ENST00000243108 GLYCTKQ8IVS8 523 aa18.67■□□□□ 0.58
HOXC6-201ENST00000243108 C3orf58Q8NDZ4 430 aa18.67■□□□□ 0.58
HOXC6-201ENST00000243108 EDAQ92838 391 aa18.67■□□□□ 0.58
HOXC6-201ENST00000243108 NECTIN4Q96NY8 510 aa18.67■□□□□ 0.58
HOXC6-201ENST00000243108 CRACR2AQ9BSW2 395 aa18.67■□□□□ 0.58
HOXC6-201ENST00000243108 SFXN1Q9H9B4 322 aa18.67■□□□□ 0.58
HOXC6-201ENST00000243108 LZTFL1Q9NQ48 299 aa18.67■□□□□ 0.58
HOXC6-201ENST00000243108 ARHGAP20Q9P2F6 1191 aa18.67■□□□□ 0.58
HOXC6-201ENST00000243108 SSX2IPQ9Y2D8 614 aa18.67■□□□□ 0.58
HOXC6-201ENST00000243108 ADH1AP07327 375 aa18.66■□□□□ 0.58
HOXC6-201ENST00000243108 MTHFRP42898 656 aa18.66■□□□□ 0.58
HOXC6-201ENST00000243108 CLCNKBP51801 687 aa18.66■□□□□ 0.58
HOXC6-201ENST00000243108 ARHGAP29Q52LW3 1261 aa18.66■□□□□ 0.58
HOXC6-201ENST00000243108 GPR149Q86SP6 731 aa18.66■□□□□ 0.58
HOXC6-201ENST00000243108 FRMD4BQ9Y2L6 1034 aa18.66■□□□□ 0.58
HOXC6-201ENST00000243108 SF3B1O75533 1304 aaKnown RBP eCLIP18.66■□□□□ 0.58
HOXC6-201ENST00000243108 ZNF318Q5VUA4 2279 aa18.66■□□□□ 0.58
HOXC6-201ENST00000243108 KIF5CO60282 957 aa18.66■□□□□ 0.58
HOXC6-201ENST00000243108 RFPL2O75678 378 aa18.66■□□□□ 0.58
HOXC6-201ENST00000243108 MCF2P10911 925 aa18.66■□□□□ 0.58
HOXC6-201ENST00000243108 HARSP12081 509 aaKnown RBP18.66■□□□□ 0.58
HOXC6-201ENST00000243108 CYP2J2P51589 502 aa18.66■□□□□ 0.58
HOXC6-201ENST00000243108 UPP1Q16831 310 aa18.66■□□□□ 0.58
HOXC6-201ENST00000243108 EXOC3L4Q17RC7 722 aa18.66■□□□□ 0.58
HOXC6-201ENST00000243108 DCAF17Q5H9S7 520 aaPredicted RBP18.66■□□□□ 0.58
HOXC6-201ENST00000243108 ATAT1Q5SQI0 421 aa18.66■□□□□ 0.58
HOXC6-201ENST00000243108 FAM171A1Q5VUB5 890 aa18.66■□□□□ 0.58
HOXC6-201ENST00000243108 LILRA6Q6PI73 481 aa18.66■□□□□ 0.58
HOXC6-201ENST00000243108 TMEM130Q8N3G9 435 aa18.66■□□□□ 0.58
HOXC6-201ENST00000243108 SNX27Q96L92 541 aa18.66■□□□□ 0.58
HOXC6-201ENST00000243108 RIPOR3Q96MK2 946 aa18.66■□□□□ 0.58
HOXC6-201ENST00000243108 TCHPQ9BT92 498 aa18.66■□□□□ 0.58
HOXC6-201ENST00000243108 MYO1AQ9UBC5 1043 aa18.66■□□□□ 0.58
HOXC6-201ENST00000243108 TGM5O43548 720 aa18.65■□□□□ 0.58
HOXC6-201ENST00000243108 LCA5LO95447 670 aa18.65■□□□□ 0.58
HOXC6-201ENST00000243108 GLUD1P00367 558 aa18.65■□□□□ 0.58
HOXC6-201ENST00000243108 PON1P27169 355 aa18.65■□□□□ 0.58
HOXC6-201ENST00000243108 CASQ1P31415 396 aa18.65■□□□□ 0.58
HOXC6-201ENST00000243108 SMTNP53814 917 aa18.65■□□□□ 0.58
HOXC6-201ENST00000243108 POLR2FP61218 127 aaKnown RBP18.65■□□□□ 0.58
HOXC6-201ENST00000243108 ZXDAP98168 799 aa18.65■□□□□ 0.58
HOXC6-201ENST00000243108 MAPK8IP2Q13387 824 aaPredicted RBP18.65■□□□□ 0.58
HOXC6-201ENST00000243108 TCERG1LQ5VWI1 586 aa18.65■□□□□ 0.58
HOXC6-201ENST00000243108 HGSNATQ68CP4 663 aa18.65■□□□□ 0.58
HOXC6-201ENST00000243108 GBP6Q6ZN66 633 aa18.65■□□□□ 0.58
HOXC6-201ENST00000243108 HFE2Q6ZVN8 426 aa18.65■□□□□ 0.58
HOXC6-201ENST00000243108 GPR65Q8IYL9 337 aa18.65■□□□□ 0.58
HOXC6-201ENST00000243108 LNX1Q8TBB1 728 aaPredicted RBP18.65■□□□□ 0.58
HOXC6-201ENST00000243108 KCNN1Q92952 543 aa18.65■□□□□ 0.58
HOXC6-201ENST00000243108 CLSTN3Q9BQT9 956 aa18.65■□□□□ 0.58
HOXC6-201ENST00000243108 CCDC94Q9BW85 323 aaPredicted RBP18.65■□□□□ 0.58
HOXC6-201ENST00000243108 IRX2Q9BZI1 471 aaPredicted RBP18.65■□□□□ 0.58
HOXC6-201ENST00000243108 FNIP2Q9P278 1114 aa18.65■□□□□ 0.58
HOXC6-201ENST00000243108 ANKFY1Q9P2R3 1169 aa18.65■□□□□ 0.58
HOXC6-201ENST00000243108 FBXL5Q9UKA1 691 aa18.65■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms