RNA–Protein interactions for RNA: ENST00000238146.8

DDX55-201, Transcript of DEAD-box helicase 55, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX55, Length 2,654 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-201ENST00000238146 SARNPP82979 210 aaKnown RBP16.36■□□□□ 0.21
DDX55-201ENST00000238146 AOC3Q16853 763 aa16.36■□□□□ 0.21
DDX55-201ENST00000238146 TKFCQ3LXA3 575 aa16.36■□□□□ 0.21
DDX55-201ENST00000238146 XKR9Q5GH70 373 aa16.36■□□□□ 0.21
DDX55-201ENST00000238146 DACT2Q5SW24 774 aa16.36■□□□□ 0.21
DDX55-201ENST00000238146 TMEM154Q6P9G4 183 aa16.36■□□□□ 0.21
DDX55-201ENST00000238146 MFSD7Q6UXD7 560 aa16.36■□□□□ 0.21
DDX55-201ENST00000238146 NLRX1Q86UT6 975 aa16.36■□□□□ 0.21
DDX55-201ENST00000238146 SLITRK1Q96PX8 696 aa16.36■□□□□ 0.21
DDX55-201ENST00000238146 PPCSQ9HAB8 311 aa16.36■□□□□ 0.21
DDX55-201ENST00000238146 SSU72Q9NP77 194 aaKnown RBP16.36■□□□□ 0.21
DDX55-201ENST00000238146 FBXO28Q9NVF7 368 aa16.36■□□□□ 0.21
DDX55-201ENST00000238146 CCDC22O60826 627 aa16.36■□□□□ 0.21
DDX55-201ENST00000238146 TROVE2P10155 538 aaKnown RBP eCLIP16.36■□□□□ 0.21
DDX55-201ENST00000238146 NEFHP12036 1026 aa16.36■□□□□ 0.21
DDX55-201ENST00000238146 CETN2P41208 172 aa16.36■□□□□ 0.21
DDX55-201ENST00000238146 WDR72Q3MJ13 1102 aa16.36■□□□□ 0.21
DDX55-201ENST00000238146 C15orf39Q6ZRI6 1047 aa16.36■□□□□ 0.21
DDX55-201ENST00000238146 CENPUQ71F23 418 aa16.36■□□□□ 0.21
DDX55-201ENST00000238146 ANKMY2Q8IV38 441 aa16.36■□□□□ 0.21
DDX55-201ENST00000238146 C4orf19Q8IY42 314 aa16.36■□□□□ 0.21
DDX55-201ENST00000238146 RCOR2Q8IZ40 523 aa16.36■□□□□ 0.21
DDX55-201ENST00000238146 TSC22D3Q99576 134 aa16.36■□□□□ 0.21
DDX55-201ENST00000238146 C12orf65Q9H3J6 166 aaKnown RBP16.36■□□□□ 0.21
DDX55-201ENST00000238146 ARL8BQ9NVJ2 186 aa16.36■□□□□ 0.21
DDX55-201ENST00000238146 NRXN2Q9P2S2 1712 aa16.36■□□□□ 0.21
DDX55-201ENST00000238146 ZBED4O75132 1171 aa16.35■□□□□ 0.21
DDX55-201ENST00000238146 VHLP40337 213 aa16.35■□□□□ 0.21
DDX55-201ENST00000238146 HSD17B4P51659 736 aa16.35■□□□□ 0.21
DDX55-201ENST00000238146 GEMIN4P57678 1058 aaKnown RBP16.35■□□□□ 0.21
DDX55-201ENST00000238146 EFTUD2Q15029 972 aaKnown RBP eCLIP16.35■□□□□ 0.212e-11■■■■■ 32.6
DDX55-201ENST00000238146 GNPTABQ3T906 1256 aa16.35■□□□□ 0.21
DDX55-201ENST00000238146 STRIP1Q5VSL9 837 aa16.35■□□□□ 0.21
DDX55-201ENST00000238146 LMBRD2Q68DH5 695 aaPredicted RBP16.35■□□□□ 0.21
DDX55-201ENST00000238146 BSNDQ8WZ55 320 aa16.35■□□□□ 0.21
DDX55-201ENST00000238146 PTCD3Q96EY7 689 aaKnown RBP16.35■□□□□ 0.21
DDX55-201ENST00000238146 C8orf37Q96NL8 207 aa16.35■□□□□ 0.21
DDX55-201ENST00000238146 BTBD10Q9BSF8 475 aa16.35■□□□□ 0.21
DDX55-201ENST00000238146 RABGEF1Q9UJ41 708 aa16.35■□□□□ 0.21
DDX55-201ENST00000238146 ASB3Q9Y575 518 aa16.35■□□□□ 0.21
DDX55-201ENST00000238146 CLUHO75153 1309 aa16.35■□□□□ 0.21
DDX55-201ENST00000238146 CFAP69A5D8W1 941 aa16.35■□□□□ 0.21
DDX55-201ENST00000238146 GSC2O15499 205 aa16.35■□□□□ 0.21
DDX55-201ENST00000238146 SMIM24O75264 130 aa16.35■□□□□ 0.21
DDX55-201ENST00000238146 ENTPD3O75355 529 aa16.35■□□□□ 0.21
DDX55-201ENST00000238146 PIAS1O75925 651 aa16.35■□□□□ 0.21
DDX55-201ENST00000238146 TJP3O95049 919 aa16.35■□□□□ 0.21
DDX55-201ENST00000238146 SP100P23497 879 aaPredicted RBP16.35■□□□□ 0.21
DDX55-201ENST00000238146 DMP1Q13316 513 aaPredicted RBP16.35■□□□□ 0.21
DDX55-201ENST00000238146 OASLQ15646 514 aaKnown RBP16.35■□□□□ 0.21
DDX55-201ENST00000238146 ZFYVE27Q5T4F4 411 aa16.35■□□□□ 0.21
DDX55-201ENST00000238146 SNX30Q5VWJ9 437 aa16.35■□□□□ 0.21
DDX55-201ENST00000238146 SLC30A9Q6PML9 568 aa16.35■□□□□ 0.21
DDX55-201ENST00000238146 GPD1LQ8N335 351 aa16.35■□□□□ 0.21
DDX55-201ENST00000238146 TCP10LQ8TDR4 215 aa16.35■□□□□ 0.21
DDX55-201ENST00000238146 UCMAQ8WVF2 138 aa16.35■□□□□ 0.21
DDX55-201ENST00000238146 NRG4Q8WWG1 115 aa16.35■□□□□ 0.21
DDX55-201ENST00000238146 NGLY1Q96IV0 654 aa16.35■□□□□ 0.21
DDX55-201ENST00000238146 FAM213AQ9BRX8 229 aa16.35■□□□□ 0.21
DDX55-201ENST00000238146 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.35■□□□□ 0.21
DDX55-201ENST00000238146 KMT5AQ9NQR1 393 aa16.35■□□□□ 0.21
DDX55-201ENST00000238146 SHOC2Q9UQ13 582 aa16.35■□□□□ 0.21
DDX55-201ENST00000238146 DRG1Q9Y295 367 aaKnown RBP16.35■□□□□ 0.21
DDX55-201ENST00000238146 GOLGA8SH3BPF8 625 aa16.34■□□□□ 0.21
DDX55-201ENST00000238146 GOLGA8MH3BSY2 632 aa16.34■□□□□ 0.21
DDX55-201ENST00000238146 ATP2A1O14983 1001 aa16.34■□□□□ 0.21
DDX55-201ENST00000238146 ACO1P21399 889 aaKnown RBP16.34■□□□□ 0.21
DDX55-201ENST00000238146 PIK3CAP42336 1068 aa16.34■□□□□ 0.21
DDX55-201ENST00000238146 RPL7AP62424 266 aaKnown RBP16.34■□□□□ 0.21
DDX55-201ENST00000238146 MRPS9P82933 396 aaKnown RBP16.34■□□□□ 0.21
DDX55-201ENST00000238146 RCN1Q15293 331 aa16.34■□□□□ 0.21
DDX55-201ENST00000238146 ZYXQ15942 572 aaKnown RBP16.34■□□□□ 0.21
DDX55-201ENST00000238146 CCDC6Q16204 474 aa16.34■□□□□ 0.21
DDX55-201ENST00000238146 ACSBG2Q5FVE4 666 aa16.34■□□□□ 0.21
DDX55-201ENST00000238146 SPOPLQ6IQ16 392 aa16.34■□□□□ 0.21
DDX55-201ENST00000238146 NIPA1Q7RTP0 329 aa16.34■□□□□ 0.21
DDX55-201ENST00000238146 APLFQ8IW19 511 aaPredicted RBP16.34■□□□□ 0.21
DDX55-201ENST00000238146 ABRAQ8N0Z2 381 aa16.34■□□□□ 0.21
DDX55-201ENST00000238146 FEZF2Q8TBJ5 459 aa16.34■□□□□ 0.21
DDX55-201ENST00000238146 TEKT4Q8WW24 435 aa16.34■□□□□ 0.21
DDX55-201ENST00000238146 RBM41Q96IZ5 413 aaKnown RBP16.34■□□□□ 0.21
DDX55-201ENST00000238146 VCPIP1Q96JH7 1222 aa16.34■□□□□ 0.21
DDX55-201ENST00000238146 AGBL1Q96MI9 1066 aa16.34■□□□□ 0.21
DDX55-201ENST00000238146 DEFB129Q9H1M3 183 aa16.34■□□□□ 0.21
DDX55-201ENST00000238146 HEY2Q9UBP5 337 aa16.34■□□□□ 0.21
DDX55-201ENST00000238146 SERPINA10Q9UK55 444 aa16.34■□□□□ 0.21
DDX55-201ENST00000238146 UBIAD1Q9Y5Z9 338 aa16.34■□□□□ 0.21
DDX55-201ENST00000238146 SLX4Q8IY92 1834 aa16.34■□□□□ 0.21
DDX55-201ENST00000238146 A0A0G2JND7 137 aa16.34■□□□□ 0.21
DDX55-201ENST00000238146 HAUS5O94927 633 aa16.34■□□□□ 0.21
DDX55-201ENST00000238146 SSTR1P30872 391 aa16.34■□□□□ 0.21
DDX55-201ENST00000238146 SOX10P56693 466 aa16.34■□□□□ 0.21
DDX55-201ENST00000238146 GAD2Q05329 585 aa16.34■□□□□ 0.21
DDX55-201ENST00000238146 TFDP1Q14186 410 aa16.34■□□□□ 0.21
DDX55-201ENST00000238146 IRGCQ6NXR0 463 aa16.34■□□□□ 0.21
DDX55-201ENST00000238146 PHF13Q86YI8 300 aaPredicted RBP16.34■□□□□ 0.21
DDX55-201ENST00000238146 CFAP61Q8NHU2 1237 aa16.34■□□□□ 0.21
DDX55-201ENST00000238146 PTPRN2Q92932 1015 aa16.34■□□□□ 0.21
DDX55-201ENST00000238146 HAUS1Q96CS2 278 aa16.34■□□□□ 0.21
DDX55-201ENST00000238146 TMEM121Q9BTD3 319 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms