RNA–Protein interactions for RNA: ENST00000237186.10

UBE3D-201, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 1,879 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-201ENST00000237186 GLTPD2A6NH11 291 aa17.13■□□□□ 0.33
UBE3D-201ENST00000237186 INO80B-WBP1J3KQ70 363 aa17.13■□□□□ 0.33
UBE3D-201ENST00000237186 ATF2P15336 505 aa17.13■□□□□ 0.33
UBE3D-201ENST00000237186 CD58P19256 250 aa17.13■□□□□ 0.33
UBE3D-201ENST00000237186 BRD2P25440 801 aaKnown RBP17.13■□□□□ 0.33
UBE3D-201ENST00000237186 ERMARDQ5T6L9 678 aa17.13■□□□□ 0.33
UBE3D-201ENST00000237186 EEF1DP3Q658K8 133 aa17.13■□□□□ 0.33
UBE3D-201ENST00000237186 DNAJC24Q6P3W2 148 aa17.13■□□□□ 0.33
UBE3D-201ENST00000237186 MICALCLQ6ZW33 695 aa17.13■□□□□ 0.33
UBE3D-201ENST00000237186 MOB2Q70IA6 237 aa17.13■□□□□ 0.33
UBE3D-201ENST00000237186 ANKS1BQ7Z6G8 1248 aa17.13■□□□□ 0.33
UBE3D-201ENST00000237186 TFAP2BQ92481 460 aa17.13■□□□□ 0.33
UBE3D-201ENST00000237186 COPS5Q92905 334 aa17.13■□□□□ 0.33
UBE3D-201ENST00000237186 OPTNQ96CV9 577 aa17.13■□□□□ 0.33
UBE3D-201ENST00000237186 INO80BQ9C086 356 aaPredicted RBP17.13■□□□□ 0.33
UBE3D-201ENST00000237186 CDT1Q9H211 546 aa17.13■□□□□ 0.33
UBE3D-201ENST00000237186 PPANQ9NQ55 473 aaKnown RBP17.13■□□□□ 0.33
UBE3D-201ENST00000237186 USTQ9Y2C2 406 aa17.13■□□□□ 0.33
UBE3D-201ENST00000237186 RASGRF2O14827 1237 aa17.12■□□□□ 0.33
UBE3D-201ENST00000237186 TCEA3O75764 348 aa17.12■□□□□ 0.33
UBE3D-201ENST00000237186 C22orf31O95567 290 aa17.12■□□□□ 0.33
UBE3D-201ENST00000237186 WEE2P0C1S8 567 aa17.12■□□□□ 0.33
UBE3D-201ENST00000237186 KLRC2P26717 231 aa17.12■□□□□ 0.33
UBE3D-201ENST00000237186 LMNB2Q03252 620 aa17.12■□□□□ 0.33
UBE3D-201ENST00000237186 ZNF252P-AS1Q0IIN9 211 aa17.12■□□□□ 0.33
UBE3D-201ENST00000237186 UBAP2Q5T6F2 1119 aaKnown RBP17.12■□□□□ 0.33
UBE3D-201ENST00000237186 ERICH1Q86X53 443 aa17.12■□□□□ 0.33
UBE3D-201ENST00000237186 C10orf67Q8IYJ2 551 aa17.12■□□□□ 0.33
UBE3D-201ENST00000237186 THNSL1Q8IYQ7 743 aa17.12■□□□□ 0.33
UBE3D-201ENST00000237186 LINC01465Q8N7H1 131 aa17.12■□□□□ 0.33
UBE3D-201ENST00000237186 GTF3C2Q8WUA4 911 aaPredicted RBP17.12■□□□□ 0.33
UBE3D-201ENST00000237186 TRAPPC12Q8WVT3 735 aa17.12■□□□□ 0.33
UBE3D-201ENST00000237186 NLRP4Q96MN2 994 aa17.12■□□□□ 0.33
UBE3D-201ENST00000237186 SCLT1Q96NL6 688 aa17.12■□□□□ 0.33
UBE3D-201ENST00000237186 SLITRK1Q96PX8 696 aa17.12■□□□□ 0.33
UBE3D-201ENST00000237186 BCO2Q9BYV7 579 aa17.12■□□□□ 0.33
UBE3D-201ENST00000237186 FOXP3Q9BZS1 431 aa17.12■□□□□ 0.33
UBE3D-201ENST00000237186 RASSF4Q9H2L5 321 aa17.12■□□□□ 0.33
UBE3D-201ENST00000237186 ADAM7Q9H2U9 754 aa17.12■□□□□ 0.33
UBE3D-201ENST00000237186 RPF1Q9H9Y2 349 aaKnown RBP17.12■□□□□ 0.33
UBE3D-201ENST00000237186 STRIP2Q9ULQ0 834 aa17.12■□□□□ 0.33
UBE3D-201ENST00000237186 B4GALT5O43286 388 aa17.12■□□□□ 0.33
UBE3D-201ENST00000237186 GJB6O95452 261 aa17.12■□□□□ 0.33
UBE3D-201ENST00000237186 TTC4O95801 387 aa17.12■□□□□ 0.33
UBE3D-201ENST00000237186 ADCY8P40145 1251 aa17.12■□□□□ 0.33
UBE3D-201ENST00000237186 ITGA8P53708 1063 aa17.12■□□□□ 0.33
UBE3D-201ENST00000237186 GSCP56915 257 aaPredicted RBP17.12■□□□□ 0.33
UBE3D-201ENST00000237186 LAMC2Q13753 1193 aa17.12■□□□□ 0.33
UBE3D-201ENST00000237186 AUHQ13825 339 aaKnown RBP17.12■□□□□ 0.33
UBE3D-201ENST00000237186 TTLL12Q14166 644 aaPredicted RBP17.12■□□□□ 0.33
UBE3D-201ENST00000237186 EAPPQ56P03 285 aaPredicted RBP17.12■□□□□ 0.33
UBE3D-201ENST00000237186 TMEM63BQ5T3F8 832 aa17.12■□□□□ 0.33
UBE3D-201ENST00000237186 RNPEPQ9H4A4 650 aa17.12■□□□□ 0.33
UBE3D-201ENST00000237186 MINDY3Q9H8M7 445 aa17.12■□□□□ 0.33
UBE3D-201ENST00000237186 VRTNQ9H8Y1 702 aa17.12■□□□□ 0.33
UBE3D-201ENST00000237186 IFT122Q9HBG6 1241 aa17.12■□□□□ 0.33
UBE3D-201ENST00000237186 PDGFCQ9NRA1 345 aa17.12■□□□□ 0.33
UBE3D-201ENST00000237186 ANAPC5Q9UJX4 755 aa17.12■□□□□ 0.33
UBE3D-201ENST00000237186 CEP83Q9Y592 693 aa17.12■□□□□ 0.33
UBE3D-201ENST00000237186 TLDC2A0PJX2 215 aa17.11■□□□□ 0.33
UBE3D-201ENST00000237186 MAGEB2O15479 319 aa17.11■□□□□ 0.33
UBE3D-201ENST00000237186 TJP3O95049 919 aa17.11■□□□□ 0.33
UBE3D-201ENST00000237186 IQCF3P0C7M6 154 aa17.11■□□□□ 0.33
UBE3D-201ENST00000237186 MCF2P10911 925 aa17.11■□□□□ 0.33
UBE3D-201ENST00000237186 CHKAP35790 457 aa17.11■□□□□ 0.33
UBE3D-201ENST00000237186 CLCN3P51790 818 aa17.11■□□□□ 0.33
UBE3D-201ENST00000237186 ARHGAP1Q07960 439 aa17.11■□□□□ 0.33
UBE3D-201ENST00000237186 AMHR2Q16671 573 aa17.11■□□□□ 0.33
UBE3D-201ENST00000237186 LDLRAD1Q5T700 205 aa17.11■□□□□ 0.33
UBE3D-201ENST00000237186 DCUN1D2Q6PH85 259 aa17.11■□□□□ 0.33
UBE3D-201ENST00000237186 C6orf89Q6UWU4 347 aa17.11■□□□□ 0.33
UBE3D-201ENST00000237186 ZNF365Q70YC5 407 aa17.11■□□□□ 0.33
UBE3D-201ENST00000237186 CEP120Q8N960 986 aa17.11■□□□□ 0.33
UBE3D-201ENST00000237186 CCHCR1Q8TD31 782 aa17.11■□□□□ 0.33
UBE3D-201ENST00000237186 SERPINB12Q96P63 405 aa17.11■□□□□ 0.33
UBE3D-201ENST00000237186 MCEEQ96PE7 176 aa17.11■□□□□ 0.33
UBE3D-201ENST00000237186 XPO6Q96QU8 1125 aaKnown RBP17.11■□□□□ 0.33
UBE3D-201ENST00000237186 DDX56Q9NY93 547 aaKnown RBP17.11■□□□□ 0.33
UBE3D-201ENST00000237186 DRG1Q9Y295 367 aaKnown RBP17.11■□□□□ 0.33
UBE3D-201ENST00000237186 IVNS1ABPQ9Y6Y0 642 aa17.11■□□□□ 0.33
UBE3D-201ENST00000237186 F8VP50 259 aa17.1■□□□□ 0.33
UBE3D-201ENST00000237186 GPR25O00155 361 aa17.1■□□□□ 0.33
UBE3D-201ENST00000237186 MEFVO15553 781 aaPredicted RBP17.1■□□□□ 0.33
UBE3D-201ENST00000237186 GJB1P08034 283 aa17.1■□□□□ 0.33
UBE3D-201ENST00000237186 POLR2BP30876 1174 aaKnown RBP17.1■□□□□ 0.33
UBE3D-201ENST00000237186 PHKA2P46019 1235 aa17.1■□□□□ 0.33
UBE3D-201ENST00000237186 IFI35P80217 286 aaPredicted RBP17.1■□□□□ 0.33
UBE3D-201ENST00000237186 OGDHQ02218 1023 aa17.1■□□□□ 0.33
UBE3D-201ENST00000237186 TNFAIP2Q03169 654 aa17.1■□□□□ 0.33
UBE3D-201ENST00000237186 ATP13A4Q4VNC1 1196 aa17.1■□□□□ 0.33
UBE3D-201ENST00000237186 ZNF394Q53GI3 561 aa17.1■□□□□ 0.33
UBE3D-201ENST00000237186 CEP128Q6ZU80 1094 aa17.1■□□□□ 0.33
UBE3D-201ENST00000237186 ILDR2Q71H61 639 aa17.1■□□□□ 0.33
UBE3D-201ENST00000237186 POLNQ7Z5Q5 900 aa17.1■□□□□ 0.33
UBE3D-201ENST00000237186 CCDC25Q86WR0 208 aa17.1■□□□□ 0.33
UBE3D-201ENST00000237186 CXorf38Q8TB03 319 aa17.1■□□□□ 0.33
UBE3D-201ENST00000237186 FNIP1Q8TF40 1166 aa17.1■□□□□ 0.33
UBE3D-201ENST00000237186 CCDC114Q96M63 670 aa17.1■□□□□ 0.33
UBE3D-201ENST00000237186 ASB7Q9H672 318 aa17.1■□□□□ 0.33
UBE3D-201ENST00000237186 SIX4Q9UIU6 781 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms