RNA–Protein interactions for RNA: ENST00000233146.6

MSH2-201, Transcript of mutS homolog 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH2, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-201ENST00000233146 PSMD6Q15008 389 aa13.68□□□□□ -0.22
MSH2-201ENST00000233146 KCNJ8Q15842 424 aa13.68□□□□□ -0.22
MSH2-201ENST00000233146 CAPN12Q6ZSI9 719 aa13.68□□□□□ -0.22
MSH2-201ENST00000233146 GSTCDQ8NEC7 633 aa13.68□□□□□ -0.22
MSH2-201ENST00000233146 AK8Q96MA6 479 aa13.68□□□□□ -0.22
MSH2-201ENST00000233146 EHD1Q9H4M9 534 aa13.68□□□□□ -0.22
MSH2-201ENST00000233146 Q9H521 79 aa13.68□□□□□ -0.22
MSH2-201ENST00000233146 SENP1Q9P0U3 644 aa13.68□□□□□ -0.22
MSH2-201ENST00000233146 ARMCX1Q9P291 453 aa13.68□□□□□ -0.22
MSH2-201ENST00000233146 IGSF9Q9P2J2 1179 aa13.68□□□□□ -0.22
MSH2-201ENST00000233146 TRAF5O00463 557 aa13.68□□□□□ -0.22
MSH2-201ENST00000233146 IVDP26440 423 aa13.68□□□□□ -0.22
MSH2-201ENST00000233146 IRX4P78413 519 aa13.68□□□□□ -0.22
MSH2-201ENST00000233146 SIX1Q15475 284 aaPredicted RBP13.68□□□□□ -0.22
MSH2-201ENST00000233146 OGFRL1Q5TC84 451 aaPredicted RBP13.68□□□□□ -0.22
MSH2-201ENST00000233146 NANOGP8Q6NSW7 305 aa13.68□□□□□ -0.22
MSH2-201ENST00000233146 NLRP10Q86W26 655 aa13.68□□□□□ -0.22
MSH2-201ENST00000233146 C12orf50Q8NA57 414 aaPredicted RBP13.68□□□□□ -0.22
MSH2-201ENST00000233146 SLC30A5Q8TAD4 765 aa13.68□□□□□ -0.22
MSH2-201ENST00000233146 OLIG1Q8TAK6 271 aa13.68□□□□□ -0.22
MSH2-201ENST00000233146 CCDC85AQ96PX6 553 aaPredicted RBP13.68□□□□□ -0.22
MSH2-201ENST00000233146 NMUR2Q9GZQ4 415 aa13.68□□□□□ -0.22
MSH2-201ENST00000233146 PAIP1Q9H074 479 aaKnown RBP13.68□□□□□ -0.22
MSH2-201ENST00000233146 FBXO9Q9UK97 447 aaPredicted RBP13.68□□□□□ -0.22
MSH2-201ENST00000233146 RAB26Q9ULW5 256 aa13.68□□□□□ -0.22
MSH2-201ENST00000233146 TMA7Q9Y2S6 64 aaKnown RBP13.68□□□□□ -0.22
MSH2-201ENST00000233146 RBMX2Q9Y388 322 aaKnown RBP13.68□□□□□ -0.22
MSH2-201ENST00000233146 CNTNAP5Q8WYK1 1306 aa13.67□□□□□ -0.22
MSH2-201ENST00000233146 MYOCOSA0A1B0GUC4 107 aa13.67□□□□□ -0.22
MSH2-201ENST00000233146 TCRBV7S2A1N4TA0A589 114 aa13.67□□□□□ -0.22
MSH2-201ENST00000233146 CAPN8A6NHC0 703 aa13.67□□□□□ -0.22
MSH2-201ENST00000233146 TRIM64CA6NLI5 447 aa13.67□□□□□ -0.22
MSH2-201ENST00000233146 TGDSO95455 350 aa13.67□□□□□ -0.22
MSH2-201ENST00000233146 DLDP09622 509 aaKnown RBP13.67□□□□□ -0.22
MSH2-201ENST00000233146 PDE6AP16499 860 aa13.67□□□□□ -0.22
MSH2-201ENST00000233146 POLR2EP19388 210 aaKnown RBP13.67□□□□□ -0.22
MSH2-201ENST00000233146 MZF1P28698 734 aaPredicted RBP13.67□□□□□ -0.22
MSH2-201ENST00000233146 SLC5A3P53794 718 aa13.67□□□□□ -0.22
MSH2-201ENST00000233146 IGBP1P78318 339 aa13.67□□□□□ -0.22
MSH2-201ENST00000233146 LPCAT2Q7L5N7 544 aa13.67□□□□□ -0.22
MSH2-201ENST00000233146 FASTKD5Q7L8L6 764 aaKnown RBP13.67□□□□□ -0.22
MSH2-201ENST00000233146 TDRPQ86YL5 185 aa13.67□□□□□ -0.22
MSH2-201ENST00000233146 C4orf33Q8N1A6 199 aa13.67□□□□□ -0.22
MSH2-201ENST00000233146 SLCO2A1Q92959 643 aa13.67□□□□□ -0.22
MSH2-201ENST00000233146 CEP63Q96MT8 703 aa13.67□□□□□ -0.22
MSH2-201ENST00000233146 RBM15Q96T37 977 aaKnown RBP eCLIP13.67□□□□□ -0.223e-8■■■■□ 21.3
MSH2-201ENST00000233146 NCKIPSDQ9NZQ3 722 aa13.67□□□□□ -0.22
MSH2-201ENST00000233146 TMOD2Q9NZR1 351 aa13.67□□□□□ -0.22
MSH2-201ENST00000233146 KLHL3Q9UH77 587 aa13.67□□□□□ -0.22
MSH2-201ENST00000233146 APPL1Q9UKG1 709 aa13.67□□□□□ -0.22
MSH2-201ENST00000233146 DCCP43146 1447 aa13.67□□□□□ -0.22
MSH2-201ENST00000233146 TNKSO95271 1327 aa13.67□□□□□ -0.22
MSH2-201ENST00000233146 FAM205AQ6ZU69 1335 aa13.67□□□□□ -0.22
MSH2-201ENST00000233146 MYMKA6NI61 221 aa13.67□□□□□ -0.22
MSH2-201ENST00000233146 CYP26A1O43174 497 aa13.67□□□□□ -0.22
MSH2-201ENST00000233146 TOM1O60784 492 aa13.67□□□□□ -0.22
MSH2-201ENST00000233146 CSDE1O75534 798 aaKnown RBP13.67□□□□□ -0.22
MSH2-201ENST00000233146 HOXA7P31268 230 aaPredicted RBP13.67□□□□□ -0.22
MSH2-201ENST00000233146 PKN2Q16513 984 aaKnown RBP13.67□□□□□ -0.22
MSH2-201ENST00000233146 EFHC1Q5JVL4 640 aa13.67□□□□□ -0.22
MSH2-201ENST00000233146 IYDQ6PHW0 289 aa13.67□□□□□ -0.22
MSH2-201ENST00000233146 IFNLR1Q8IU57 520 aaPredicted RBP13.67□□□□□ -0.22
MSH2-201ENST00000233146 PPM1KQ8N3J5 372 aa13.67□□□□□ -0.22
MSH2-201ENST00000233146 VGLL2Q8N8G2 317 aa13.67□□□□□ -0.22
MSH2-201ENST00000233146 CEP295NLQ96MC4 621 aa13.67□□□□□ -0.22
MSH2-201ENST00000233146 PIH1D3Q9NQM4 214 aaKnown RBP13.67□□□□□ -0.22
MSH2-201ENST00000233146 DTNAQ9Y4J8 743 aa13.67□□□□□ -0.22
MSH2-201ENST00000233146 NRXN3Q9Y4C0 1643 aa13.67□□□□□ -0.22
MSH2-201ENST00000233146 NOTOA8MTQ0 251 aa13.67□□□□□ -0.22
MSH2-201ENST00000233146 MIF4GDA9UHW6 222 aaKnown RBP13.67□□□□□ -0.22
MSH2-201ENST00000233146 POTECB2RU33 542 aa13.67□□□□□ -0.22
MSH2-201ENST00000233146 SULT1C4O75897 302 aa13.67□□□□□ -0.22
MSH2-201ENST00000233146 ZBTB11O95625 1053 aaPredicted RBP13.67□□□□□ -0.22
MSH2-201ENST00000233146 APOEP02649 317 aa13.67□□□□□ -0.22
MSH2-201ENST00000233146 SCG2P13521 617 aa13.67□□□□□ -0.22
MSH2-201ENST00000233146 HMOX2P30519 316 aa13.67□□□□□ -0.22
MSH2-201ENST00000233146 ALDH3B2P48448 385 aa13.67□□□□□ -0.22
MSH2-201ENST00000233146 ARL4CP56559 192 aa13.67□□□□□ -0.22
MSH2-201ENST00000233146 LNX1Q8TBB1 728 aaPredicted RBP13.67□□□□□ -0.22
MSH2-201ENST00000233146 KRT35Q92764 455 aa13.67□□□□□ -0.22
MSH2-201ENST00000233146 GPR101Q96P66 508 aaPredicted RBP13.67□□□□□ -0.22
MSH2-201ENST00000233146 PLVAPQ9BX97 442 aa13.67□□□□□ -0.22
MSH2-201ENST00000233146 TTC34A8MYJ7 566 aa13.66□□□□□ -0.22
MSH2-201ENST00000233146 LAD1O00515 517 aa13.66□□□□□ -0.22
MSH2-201ENST00000233146 IRS4O14654 1257 aaPredicted RBP13.66□□□□□ -0.22
MSH2-201ENST00000233146 PDE8AO60658 829 aa13.66□□□□□ -0.22
MSH2-201ENST00000233146 ENO1P06733 434 aaKnown RBP13.66□□□□□ -0.22
MSH2-201ENST00000233146 NAT2P11245 290 aa13.66□□□□□ -0.22
MSH2-201ENST00000233146 KCNA2P16389 499 aa13.66□□□□□ -0.22
MSH2-201ENST00000233146 ZNF23P17027 643 aa13.66□□□□□ -0.22
MSH2-201ENST00000233146 SLC9A1P19634 815 aa13.66□□□□□ -0.22
MSH2-201ENST00000233146 ITGA8P53708 1063 aa13.66□□□□□ -0.22
MSH2-201ENST00000233146 C21orf59P57076 290 aa13.66□□□□□ -0.22
MSH2-201ENST00000233146 CCNIQ14094 377 aa13.66□□□□□ -0.22
MSH2-201ENST00000233146 LRRC41Q15345 812 aa13.66□□□□□ -0.22
MSH2-201ENST00000233146 GRAMD1BQ3KR37 738 aa13.66□□□□□ -0.22
MSH2-201ENST00000233146 RELL1Q8IUW5 271 aa13.66□□□□□ -0.22
MSH2-201ENST00000233146 SHKBP1Q8TBC3 707 aa13.66□□□□□ -0.22
MSH2-201ENST00000233146 SNF8Q96H20 258 aa13.66□□□□□ -0.22
MSH2-201ENST00000233146 MKNK1Q9BUB5 465 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms