RNA–Protein interactions for RNA: ENST00000228918.8

LTBR-201, Transcript of lymphotoxin beta receptor, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LTBR, Length 2,260 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-201ENST00000228918 TAC1P20366 129 aa17.21■□□□□ 0.34
LTBR-201ENST00000228918 KCNJ2P63252 427 aa17.21■□□□□ 0.34
LTBR-201ENST00000228918 MTFR1Q15390 333 aa17.21■□□□□ 0.34
LTBR-201ENST00000228918 LRRC38Q5VT99 294 aa17.21■□□□□ 0.34
LTBR-201ENST00000228918 SCARA3Q6AZY7 606 aa17.21■□□□□ 0.34
LTBR-201ENST00000228918 EP400NLQ6ZTU2 488 aa17.21■□□□□ 0.34
LTBR-201ENST00000228918 SCYL3Q8IZE3 742 aa17.21■□□□□ 0.34
LTBR-201ENST00000228918 ZNF280CQ8ND82 737 aa17.21■□□□□ 0.34
LTBR-201ENST00000228918 ACAD9Q9H845 621 aa17.21■□□□□ 0.34
LTBR-201ENST00000228918 RXFP1Q9HBX9 757 aa17.21■□□□□ 0.34
LTBR-201ENST00000228918 BAIAP2L1Q9UHR4 511 aa17.21■□□□□ 0.34
LTBR-201ENST00000228918 TCRBV5S1A1TA0A578 114 aa17.2■□□□□ 0.34
LTBR-201ENST00000228918 FAM47DPA6NHR8 397 aa17.2■□□□□ 0.34
LTBR-201ENST00000228918 ATG7O95352 703 aa17.2■□□□□ 0.34
LTBR-201ENST00000228918 CALB1P05937 261 aa17.2■□□□□ 0.34
LTBR-201ENST00000228918 COPS2P61201 443 aa17.2■□□□□ 0.34
LTBR-201ENST00000228918 NBPF12Q5TAG4 269 aaPredicted RBP17.2■□□□□ 0.34
LTBR-201ENST00000228918 SPOCD1Q6ZMY3 1216 aa17.2■□□□□ 0.34
LTBR-201ENST00000228918 TRABD2AQ86V40 505 aa17.2■□□□□ 0.34
LTBR-201ENST00000228918 PNMA8AQ86V59 439 aaPredicted RBP17.2■□□□□ 0.34
LTBR-201ENST00000228918 FITM2Q8N6M3 262 aa17.2■□□□□ 0.34
LTBR-201ENST00000228918 RMDN2Q96LZ7 410 aa17.2■□□□□ 0.34
LTBR-201ENST00000228918 TTC25Q96NG3 672 aa17.2■□□□□ 0.34
LTBR-201ENST00000228918 PDGFDQ9GZP0 370 aaPredicted RBP17.2■□□□□ 0.34
LTBR-201ENST00000228918 AS3MTQ9HBK9 375 aa17.2■□□□□ 0.34
LTBR-201ENST00000228918 ZNF148Q9UQR1 794 aa17.2■□□□□ 0.34
LTBR-201ENST00000228918 IVNS1ABPQ9Y6Y0 642 aa17.2■□□□□ 0.34
LTBR-201ENST00000228918 ZSCAN5DPP0CG00 497 aa17.19■□□□□ 0.34
LTBR-201ENST00000228918 FOXN2P32314 431 aa17.19■□□□□ 0.34
LTBR-201ENST00000228918 PTPN7P35236 360 aa17.19■□□□□ 0.34
LTBR-201ENST00000228918 ARSEP51690 589 aa17.19■□□□□ 0.34
LTBR-201ENST00000228918 WDR4P57081 412 aaKnown RBP17.19■□□□□ 0.34
LTBR-201ENST00000228918 TGFB2P61812 414 aa17.19■□□□□ 0.34
LTBR-201ENST00000228918 NR1H3Q13133 447 aa17.19■□□□□ 0.34
LTBR-201ENST00000228918 ZNF268Q14587 947 aaPredicted RBP17.19■□□□□ 0.34
LTBR-201ENST00000228918 E2F5Q15329 346 aa17.19■□□□□ 0.34
LTBR-201ENST00000228918 CCDC142Q17RM4 750 aa17.19■□□□□ 0.34
LTBR-201ENST00000228918 SEZ6Q53EL9 994 aa17.19■□□□□ 0.34
LTBR-201ENST00000228918 RNF43Q68DV7 783 aa17.19■□□□□ 0.34
LTBR-201ENST00000228918 TDRPQ86YL5 185 aa17.19■□□□□ 0.34
LTBR-201ENST00000228918 C12orf42Q96LP6 360 aa17.19■□□□□ 0.34
LTBR-201ENST00000228918 MCEEQ96PE7 176 aa17.19■□□□□ 0.34
LTBR-201ENST00000228918 TEX13BQ9BXU2 312 aa17.19■□□□□ 0.34
LTBR-201ENST00000228918 DYNC1LI1Q9Y6G9 523 aaKnown RBP17.19■□□□□ 0.34
LTBR-201ENST00000228918 CCDC189A1A4V9 331 aa17.19■□□□□ 0.34
LTBR-201ENST00000228918 ATP2A1O14983 1001 aa17.19■□□□□ 0.34
LTBR-201ENST00000228918 ASS1P00966 412 aaKnown RBP17.19■□□□□ 0.34
LTBR-201ENST00000228918 EZRP15311 586 aaKnown RBP17.19■□□□□ 0.34
LTBR-201ENST00000228918 PECAM1P16284 738 aaPredicted RBP17.19■□□□□ 0.34
LTBR-201ENST00000228918 NF2P35240 595 aa17.19■□□□□ 0.34
LTBR-201ENST00000228918 HMGCS2P54868 508 aa17.19■□□□□ 0.34
LTBR-201ENST00000228918 IL9RQ01113 521 aa17.19■□□□□ 0.34
LTBR-201ENST00000228918 OGDHQ02218 1023 aa17.19■□□□□ 0.34
LTBR-201ENST00000228918 MGAT5Q09328 741 aa17.19■□□□□ 0.34
LTBR-201ENST00000228918 OASLQ15646 514 aaKnown RBP17.19■□□□□ 0.34
LTBR-201ENST00000228918 ZFYVE27Q5T4F4 411 aa17.19■□□□□ 0.34
LTBR-201ENST00000228918 BRSK2Q8IWQ3 736 aa17.19■□□□□ 0.34
LTBR-201ENST00000228918 SLC7A3Q8WY07 619 aa17.19■□□□□ 0.34
LTBR-201ENST00000228918 MIEF2Q96C03 454 aa17.19■□□□□ 0.34
LTBR-201ENST00000228918 GRAMD1AQ96CP6 724 aa17.19■□□□□ 0.34
LTBR-201ENST00000228918 IMPG2Q9BZV3 1241 aa17.19■□□□□ 0.34
LTBR-201ENST00000228918 TMEM134Q9H6X4 195 aa17.19■□□□□ 0.34
LTBR-201ENST00000228918 UBN1Q9NPG3 1134 aa17.19■□□□□ 0.34
LTBR-201ENST00000228918 PNMA3Q9UL41 463 aa17.19■□□□□ 0.34
LTBR-201ENST00000228918 hCG_1818297A0A087WSY0 165 aa17.18■□□□□ 0.34
LTBR-201ENST00000228918 F8VP50 259 aa17.18■□□□□ 0.34
LTBR-201ENST00000228918 IGF2BP3O00425 579 aaKnown RBP eCLIP17.18■□□□□ 0.34
LTBR-201ENST00000228918 LSM8O95777 96 aaKnown RBP17.18■□□□□ 0.34
LTBR-201ENST00000228918 HARSP12081 509 aaKnown RBP17.18■□□□□ 0.34
LTBR-201ENST00000228918 ETS1P14921 441 aa17.18■□□□□ 0.34
LTBR-201ENST00000228918 PTPRAP18433 802 aa17.18■□□□□ 0.34
LTBR-201ENST00000228918 VCPP55072 806 aaKnown RBP17.18■□□□□ 0.34
LTBR-201ENST00000228918 GPS1Q13098 491 aa17.18■□□□□ 0.34
LTBR-201ENST00000228918 ACVR2BQ13705 512 aa17.18■□□□□ 0.34
LTBR-201ENST00000228918 FASTKD3Q14CZ7 662 aaKnown RBP17.18■□□□□ 0.34
LTBR-201ENST00000228918 MORF4L2Q15014 288 aa17.18■□□□□ 0.34
LTBR-201ENST00000228918 DNAJC24Q6P3W2 148 aa17.18■□□□□ 0.34
LTBR-201ENST00000228918 KLHL14Q9P2G3 628 aa17.18■□□□□ 0.34
LTBR-201ENST00000228918 DRG1Q9Y295 367 aaKnown RBP17.18■□□□□ 0.34
LTBR-201ENST00000228918 ASMTLO95671 621 aa17.18■□□□□ 0.34
LTBR-201ENST00000228918 ICAM3P32942 547 aa17.18■□□□□ 0.34
LTBR-201ENST00000228918 ALDH5A1P51649 535 aaPredicted RBP17.18■□□□□ 0.34
LTBR-201ENST00000228918 CAPSQ13938 189 aa17.18■□□□□ 0.34
LTBR-201ENST00000228918 PPP1R15BQ5SWA1 713 aa17.18■□□□□ 0.34
LTBR-201ENST00000228918 TXNRD3NBQ6F5E7 133 aa17.18■□□□□ 0.34
LTBR-201ENST00000228918 ANKLE1Q8NAG6 615 aa17.18■□□□□ 0.34
LTBR-201ENST00000228918 NIFKQ9BYG3 293 aaKnown RBP17.18■□□□□ 0.34
LTBR-201ENST00000228918 HACL1Q9UJ83 578 aa17.18■□□□□ 0.34
LTBR-201ENST00000228918 PRPF4O43172 522 aaKnown RBP eCLIP17.17■□□□□ 0.34
LTBR-201ENST00000228918 CST3P01034 146 aaPredicted RBP17.17■□□□□ 0.34
LTBR-201ENST00000228918 ALADP13716 330 aa17.17■□□□□ 0.34
LTBR-201ENST00000228918 BRD2P25440 801 aaKnown RBP17.17■□□□□ 0.34
LTBR-201ENST00000228918 RNASEH2BQ5TBB1 312 aaKnown RBP17.17■□□□□ 0.34
LTBR-201ENST00000228918 DCAF15Q66K64 600 aa17.17■□□□□ 0.34
LTBR-201ENST00000228918 NKD2Q969F2 451 aaPredicted RBP17.17■□□□□ 0.34
LTBR-201ENST00000228918 KLHL29Q96CT2 875 aa17.17■□□□□ 0.34
LTBR-201ENST00000228918 ZNF112Q9UJU3 913 aa17.17■□□□□ 0.34
LTBR-201ENST00000228918 EPB41L3Q9Y2J2 1087 aaPredicted RBP17.17■□□□□ 0.34
LTBR-201ENST00000228918 FAM189A1O60320 539 aa17.17■□□□□ 0.34
LTBR-201ENST00000228918 SPAG7O75391 227 aa17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms