RNA–Protein interactions for RNA: ENST00000225576.7

TVP23C-201, Transcript of trans-golgi network vesicle protein 23 homolog C, humanhuman

TSL 1 (best) BASIC

Gene TVP23C, Length 1,527 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23C-201ENST00000225576 SKIP12755 728 aa17.87■□□□□ 0.45
TVP23C-201ENST00000225576 CD19P15391 556 aa17.87■□□□□ 0.45
TVP23C-201ENST00000225576 CTCFP49711 727 aaPredicted RBP17.87■□□□□ 0.45
TVP23C-201ENST00000225576 SOX4Q06945 474 aaPredicted RBP17.87■□□□□ 0.45
TVP23C-201ENST00000225576 NAA30Q147X3 362 aaPredicted RBP17.87■□□□□ 0.45
TVP23C-201ENST00000225576 LIN9Q5TKA1 542 aa17.87■□□□□ 0.45
TVP23C-201ENST00000225576 ZNF572Q7Z3I7 529 aaPredicted RBP17.87■□□□□ 0.45
TVP23C-201ENST00000225576 PASD1Q8IV76 773 aa17.87■□□□□ 0.45
TVP23C-201ENST00000225576 GOLGA1Q92805 767 aa17.87■□□□□ 0.45
TVP23C-201ENST00000225576 NUP85Q9BW27 656 aa17.87■□□□□ 0.45
TVP23C-201ENST00000225576 RNF19AQ9NV58 838 aa17.87■□□□□ 0.45
TVP23C-201ENST00000225576 GDAP2Q9NXN4 497 aa17.87■□□□□ 0.45
TVP23C-201ENST00000225576 CEP83Q9Y592 693 aa17.87■□□□□ 0.45
TVP23C-201ENST00000225576 SNX9Q9Y5X1 595 aa17.87■□□□□ 0.45
TVP23C-201ENST00000225576 FAM170AA1A519 330 aa17.86■□□□□ 0.45
TVP23C-201ENST00000225576 MGEA5O60502 916 aa17.86■□□□□ 0.45
TVP23C-201ENST00000225576 MMP8P22894 467 aa17.86■□□□□ 0.45
TVP23C-201ENST00000225576 TAF6P49848 677 aa17.86■□□□□ 0.45
TVP23C-201ENST00000225576 NDST1P52848 882 aa17.86■□□□□ 0.45
TVP23C-201ENST00000225576 PTP4A2Q12974 167 aa17.86■□□□□ 0.45
TVP23C-201ENST00000225576 ERCC6LQ2NKX8 1250 aa17.86■□□□□ 0.45
TVP23C-201ENST00000225576 AGMOQ6ZNB7 445 aa17.86■□□□□ 0.45
TVP23C-201ENST00000225576 GSTCDQ8NEC7 633 aa17.86■□□□□ 0.45
TVP23C-201ENST00000225576 ZNF564Q8TBZ8 553 aaPredicted RBP17.86■□□□□ 0.45
TVP23C-201ENST00000225576 CAGE1Q8TC20 777 aa17.86■□□□□ 0.45
TVP23C-201ENST00000225576 HES6Q96HZ4 224 aa17.86■□□□□ 0.45
TVP23C-201ENST00000225576 TWNKQ96RR1 684 aa17.86■□□□□ 0.45
TVP23C-201ENST00000225576 NT5C1AQ9BXI3 368 aa17.86■□□□□ 0.45
TVP23C-201ENST00000225576 GOLPH3Q9H4A6 298 aa17.86■□□□□ 0.45
TVP23C-201ENST00000225576 ADAM22Q9P0K1 906 aa17.86■□□□□ 0.45
TVP23C-201ENST00000225576 OGDHLQ9ULD0 1010 aa17.86■□□□□ 0.45
TVP23C-201ENST00000225576 PACSIN2Q9UNF0 486 aaPredicted RBP17.86■□□□□ 0.45
TVP23C-201ENST00000225576 MYH10P35580 1976 aa17.85■□□□□ 0.45
TVP23C-201ENST00000225576 MEIS3P2A8K0S8 358 aa17.85■□□□□ 0.45
TVP23C-201ENST00000225576 KPNA7A9QM74 516 aa17.85■□□□□ 0.45
TVP23C-201ENST00000225576 ATMINO43313 823 aaPredicted RBP17.85■□□□□ 0.45
TVP23C-201ENST00000225576 RRM1P23921 792 aa17.85■□□□□ 0.45
TVP23C-201ENST00000225576 ITIH3Q06033 890 aa17.85■□□□□ 0.45
TVP23C-201ENST00000225576 CNGA2Q16280 664 aa17.85■□□□□ 0.45
TVP23C-201ENST00000225576 SV2CQ496J9 727 aa17.85■□□□□ 0.45
TVP23C-201ENST00000225576 LIMS2Q7Z4I7 341 aa17.85■□□□□ 0.45
TVP23C-201ENST00000225576 UNC93AQ86WB7 457 aa17.85■□□□□ 0.45
TVP23C-201ENST00000225576 PGBD4Q96DM1 585 aa17.85■□□□□ 0.45
TVP23C-201ENST00000225576 PBKQ96KB5 322 aa17.85■□□□□ 0.45
TVP23C-201ENST00000225576 CAPZA3Q96KX2 299 aa17.85■□□□□ 0.45
TVP23C-201ENST00000225576 ZFP42Q96MM3 310 aa17.85■□□□□ 0.45
TVP23C-201ENST00000225576 DEFB118Q96PH6 123 aa17.85■□□□□ 0.45
TVP23C-201ENST00000225576 RPS6KC1Q96S38 1066 aa17.85■□□□□ 0.45
TVP23C-201ENST00000225576 GAD1Q99259 594 aa17.85■□□□□ 0.45
TVP23C-201ENST00000225576 ADAM2Q99965 735 aa17.85■□□□□ 0.45
TVP23C-201ENST00000225576 UBN1Q9NPG3 1134 aa17.85■□□□□ 0.45
TVP23C-201ENST00000225576 PRDM10Q9NQV6 1147 aa17.85■□□□□ 0.45
TVP23C-201ENST00000225576 HMGXB4Q9UGU5 601 aa17.85■□□□□ 0.45
TVP23C-201ENST00000225576 NOL12Q9UGY1 213 aaKnown RBP eCLIP17.85■□□□□ 0.45
TVP23C-201ENST00000225576 ALG6Q9Y672 507 aa17.85■□□□□ 0.45
TVP23C-201ENST00000225576 V9GYY5 206 aaPredicted RBP17.85■□□□□ 0.45
TVP23C-201ENST00000225576 PDE2AO00408 941 aaPredicted RBP17.84■□□□□ 0.45
TVP23C-201ENST00000225576 CALB1P05937 261 aa17.84■□□□□ 0.45
TVP23C-201ENST00000225576 THP07101 528 aa17.84■□□□□ 0.45
TVP23C-201ENST00000225576 FAM163BP0C2L3 166 aa17.84■□□□□ 0.45
TVP23C-201ENST00000225576 CCL5P13501 91 aa17.84■□□□□ 0.45
TVP23C-201ENST00000225576 CXCR5P32302 372 aa17.84■□□□□ 0.45
TVP23C-201ENST00000225576 SSTR3P32745 418 aaPredicted RBP17.84■□□□□ 0.45
TVP23C-201ENST00000225576 MLH1P40692 756 aa17.84■□□□□ 0.45
TVP23C-201ENST00000225576 PAFAH1B1P43034 410 aa17.84■□□□□ 0.45
TVP23C-201ENST00000225576 MTFR1Q15390 333 aa17.84■□□□□ 0.45
TVP23C-201ENST00000225576 SOWAHAQ2M3V2 549 aa17.84■□□□□ 0.45
TVP23C-201ENST00000225576 PLEKHA7Q6IQ23 1121 aa17.84■□□□□ 0.45
TVP23C-201ENST00000225576 WDTC1Q8N5D0 677 aa17.84■□□□□ 0.45
TVP23C-201ENST00000225576 RABGGTAQ92696 567 aa17.84■□□□□ 0.45
TVP23C-201ENST00000225576 HEXIM2Q96MH2 286 aaKnown RBP17.84■□□□□ 0.45
TVP23C-201ENST00000225576 PSMB7Q99436 277 aa17.84■□□□□ 0.45
TVP23C-201ENST00000225576 MRPL45Q9BRJ2 306 aaKnown RBP17.84■□□□□ 0.45
TVP23C-201ENST00000225576 C11orf70Q9BRQ4 267 aa17.84■□□□□ 0.45
TVP23C-201ENST00000225576 MRPL47Q9HD33 250 aaKnown RBP17.84■□□□□ 0.45
TVP23C-201ENST00000225576 FRMPD3Q5JV73 1810 aa17.84■□□□□ 0.45
TVP23C-201ENST00000225576 ARL5CA6NH57 179 aa17.83■□□□□ 0.45
TVP23C-201ENST00000225576 SPTLC1O15269 473 aa17.83■□□□□ 0.45
TVP23C-201ENST00000225576 HSPA8P11142 646 aaKnown RBP17.83■□□□□ 0.45
TVP23C-201ENST00000225576 STILQ15468 1287 aa17.83■□□□□ 0.45
TVP23C-201ENST00000225576 ELF2Q15723 593 aa17.83■□□□□ 0.45
TVP23C-201ENST00000225576 SGO2Q562F6 1265 aa17.83■□□□□ 0.45
TVP23C-201ENST00000225576 DENND1BQ6P3S1 775 aa17.83■□□□□ 0.45
TVP23C-201ENST00000225576 MMS22LQ6ZRQ5 1243 aa17.83■□□□□ 0.45
TVP23C-201ENST00000225576 FAM43BQ6ZT52 329 aaPredicted RBP17.83■□□□□ 0.45
TVP23C-201ENST00000225576 DPH6Q7L8W6 267 aa17.83■□□□□ 0.45
TVP23C-201ENST00000225576 FAM126BQ8IXS8 530 aa17.83■□□□□ 0.45
TVP23C-201ENST00000225576 C1orf131Q8NDD1 294 aaKnown RBP17.83■□□□□ 0.45
TVP23C-201ENST00000225576 LPPQ93052 612 aa17.83■□□□□ 0.45
TVP23C-201ENST00000225576 RNF208Q9H0X6 261 aa17.83■□□□□ 0.45
TVP23C-201ENST00000225576 TSPYL2Q9H2G4 693 aaPredicted RBP17.83■□□□□ 0.45
TVP23C-201ENST00000225576 GOLGA2P5Q9HBQ8 144 aa17.83■□□□□ 0.45
TVP23C-201ENST00000225576 CHORDC1Q9UHD1 332 aaPredicted RBP17.83■□□□□ 0.45
TVP23C-201ENST00000225576 WDR3Q9UNX4 943 aaKnown RBP eCLIP17.83■□□□□ 0.45
TVP23C-201ENST00000225576 SCINQ9Y6U3 715 aa17.83■□□□□ 0.45
TVP23C-201ENST00000225576 MIF4GDA9UHW6 222 aaKnown RBP17.82■□□□□ 0.44
TVP23C-201ENST00000225576 O00370 1275 aa17.82■□□□□ 0.44
TVP23C-201ENST00000225576 KCNK3O14649 394 aa17.82■□□□□ 0.44
TVP23C-201ENST00000225576 SELPP16109 830 aa17.82■□□□□ 0.44
TVP23C-201ENST00000225576 LILRA4P59901 499 aa17.82■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms