RNA–Protein interactions for RNA: ENST00000223127.7

PLOD3-201, Transcript of procollagen-lysine,2-oxoglutarate 5-dioxygenase 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PLOD3, Length 2,920 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLOD3-201ENST00000223127 PIK3CAP42336 1068 aa13.9□□□□□ -0.18
PLOD3-201ENST00000223127 PTGIRP43119 386 aa13.9□□□□□ -0.18
PLOD3-201ENST00000223127 SLMAPQ14BN4 828 aa13.9□□□□□ -0.18
PLOD3-201ENST00000223127 PSMD6Q15008 389 aa13.9□□□□□ -0.18
PLOD3-201ENST00000223127 TDRD10Q5VZ19 366 aaKnown RBP13.9□□□□□ -0.18
PLOD3-201ENST00000223127 SCARA3Q6AZY7 606 aa13.9□□□□□ -0.18
PLOD3-201ENST00000223127 PLEKHH3Q7Z736 793 aa13.9□□□□□ -0.18
PLOD3-201ENST00000223127 NOP9Q86U38 636 aaKnown RBP13.9□□□□□ -0.18
PLOD3-201ENST00000223127 NPLOC4Q8TAT6 608 aa13.9□□□□□ -0.18
PLOD3-201ENST00000223127 ALG3Q92685 438 aa13.9□□□□□ -0.18
PLOD3-201ENST00000223127 VTA1Q9NP79 307 aa13.9□□□□□ -0.18
PLOD3-201ENST00000223127 FGFR1OP2Q9NVK5 253 aa13.9□□□□□ -0.18
PLOD3-201ENST00000223127 USP15Q9Y4E8 981 aaPredicted RBP13.9□□□□□ -0.18
PLOD3-201ENST00000223127 TMEM253P0C7T8 217 aa13.89□□□□□ -0.19
PLOD3-201ENST00000223127 PDE6CP51160 858 aa13.89□□□□□ -0.19
PLOD3-201ENST00000223127 AUHQ13825 339 aaKnown RBP13.89□□□□□ -0.19
PLOD3-201ENST00000223127 C6orf118Q5T5N4 469 aa13.89□□□□□ -0.19
PLOD3-201ENST00000223127 OR5B17Q8NGF7 314 aa13.89□□□□□ -0.19
PLOD3-201ENST00000223127 TMEM109Q9BVC6 243 aa13.89□□□□□ -0.19
PLOD3-201ENST00000223127 MRPL4Q9BYD3 311 aaKnown RBP13.89□□□□□ -0.19
PLOD3-201ENST00000223127 CCDC113Q9H0I3 377 aa13.89□□□□□ -0.19
PLOD3-201ENST00000223127 THAP2Q9H0W7 228 aa13.89□□□□□ -0.19
PLOD3-201ENST00000223127 IGKV6-21A0A0C4DH24 114 aa13.89□□□□□ -0.19
PLOD3-201ENST00000223127 PMM2O15305 246 aa13.89□□□□□ -0.19
PLOD3-201ENST00000223127 RIPK2O43353 540 aa13.89□□□□□ -0.19
PLOD3-201ENST00000223127 PIGRP01833 764 aa13.89□□□□□ -0.19
PLOD3-201ENST00000223127 HLA-DRAP01903 254 aa13.89□□□□□ -0.19
PLOD3-201ENST00000223127 SLC26A2P50443 739 aa13.89□□□□□ -0.19
PLOD3-201ENST00000223127 EFNA5P52803 228 aa13.89□□□□□ -0.19
PLOD3-201ENST00000223127 BNIP1Q12981 228 aa13.89□□□□□ -0.19
PLOD3-201ENST00000223127 GRB14Q14449 540 aa13.89□□□□□ -0.19
PLOD3-201ENST00000223127 LRRC14Q15048 493 aa13.89□□□□□ -0.19
PLOD3-201ENST00000223127 PPP2R5EQ16537 467 aa13.89□□□□□ -0.19
PLOD3-201ENST00000223127 FAM110CQ1W6H9 321 aa13.89□□□□□ -0.19
PLOD3-201ENST00000223127 THNSL1Q8IYQ7 743 aa13.89□□□□□ -0.19
PLOD3-201ENST00000223127 EPS8L1Q8TE68 723 aa13.89□□□□□ -0.19
PLOD3-201ENST00000223127 ZNF483Q8TF39 744 aaPredicted RBP13.89□□□□□ -0.19
PLOD3-201ENST00000223127 CTNNBL1Q8WYA6 563 aaPredicted RBP13.89□□□□□ -0.19
PLOD3-201ENST00000223127 MINDY3Q9H8M7 445 aa13.89□□□□□ -0.19
PLOD3-201ENST00000223127 RASAL2Q9UJF2 1139 aa13.89□□□□□ -0.19
PLOD3-201ENST00000223127 EME2A4GXA9 379 aaPredicted RBP13.88□□□□□ -0.19
PLOD3-201ENST00000223127 PHF2O75151 1096 aa13.88□□□□□ -0.19
PLOD3-201ENST00000223127 SMPD1P17405 629 aa13.88□□□□□ -0.19
PLOD3-201ENST00000223127 CCND1P24385 295 aa13.88□□□□□ -0.19
PLOD3-201ENST00000223127 GTF2H1P32780 548 aa13.88□□□□□ -0.19
PLOD3-201ENST00000223127 DRG2P55039 364 aaKnown RBP13.88□□□□□ -0.19
PLOD3-201ENST00000223127 COPS2P61201 443 aa13.88□□□□□ -0.19
PLOD3-201ENST00000223127 FAM71AQ8IYT1 594 aa13.88□□□□□ -0.19
PLOD3-201ENST00000223127 ABRAQ8N0Z2 381 aa13.88□□□□□ -0.19
PLOD3-201ENST00000223127 SHC3Q92529 594 aa13.88□□□□□ -0.19
PLOD3-201ENST00000223127 NAP1L3Q99457 506 aaPredicted RBP13.88□□□□□ -0.19
PLOD3-201ENST00000223127 TINF2Q9BSI4 451 aa13.88□□□□□ -0.19
PLOD3-201ENST00000223127 KATNBL1Q9H079 304 aa13.88□□□□□ -0.19
PLOD3-201ENST00000223127 C1orf112Q9NSG2 853 aa13.88□□□□□ -0.19
PLOD3-201ENST00000223127 ADGRA2Q96PE1 1338 aa13.88□□□□□ -0.19
PLOD3-201ENST00000223127 TOM1L1O75674 476 aa13.88□□□□□ -0.19
PLOD3-201ENST00000223127 LDHAP00338 332 aaKnown RBP13.88□□□□□ -0.19
PLOD3-201ENST00000223127 FTLP02792 175 aaPredicted RBP13.88□□□□□ -0.19
PLOD3-201ENST00000223127 ZACNQ401N2 412 aa13.88□□□□□ -0.19
PLOD3-201ENST00000223127 TTC27Q6P3X3 843 aa13.88□□□□□ -0.19
PLOD3-201ENST00000223127 CEP120Q8N960 986 aa13.88□□□□□ -0.19
PLOD3-201ENST00000223127 MGARPQ8TDB4 240 aa13.88□□□□□ -0.19
PLOD3-201ENST00000223127 KLHL29Q96CT2 875 aa13.88□□□□□ -0.19
PLOD3-201ENST00000223127 PCDHB18PQ96TA0 734 aa13.88□□□□□ -0.19
PLOD3-201ENST00000223127 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.88□□□□□ -0.19
PLOD3-201ENST00000223127 AKT3Q9Y243 479 aa13.88□□□□□ -0.19
PLOD3-201ENST00000223127 TCP11X1B4DZS4 312 aa13.87□□□□□ -0.19
PLOD3-201ENST00000223127 ADCY6O43306 1168 aa13.87□□□□□ -0.19
PLOD3-201ENST00000223127 C4BPAP04003 597 aaKnown RBP13.87□□□□□ -0.19
PLOD3-201ENST00000223127 VTNP04004 478 aa13.87□□□□□ -0.19
PLOD3-201ENST00000223127 ACVR2BQ13705 512 aa13.87□□□□□ -0.19
PLOD3-201ENST00000223127 WDR44Q5JSH3 913 aa13.87□□□□□ -0.19
PLOD3-201ENST00000223127 EXOC3L1Q86VI1 746 aa13.87□□□□□ -0.19
PLOD3-201ENST00000223127 PPTC7Q8NI37 304 aa13.87□□□□□ -0.19
PLOD3-201ENST00000223127 LENG1Q96BZ8 264 aaPredicted RBP13.87□□□□□ -0.19
PLOD3-201ENST00000223127 ACO2Q99798 780 aaKnown RBP13.87□□□□□ -0.19
PLOD3-201ENST00000223127 KIF9Q9HAQ2 790 aa13.87□□□□□ -0.19
PLOD3-201ENST00000223127 ARHGEF3Q9NR81 526 aa13.87□□□□□ -0.19
PLOD3-201ENST00000223127 COG5Q9UP83 839 aa13.87□□□□□ -0.19
PLOD3-201ENST00000223127 TRIM33Q9UPN9 1127 aa13.87□□□□□ -0.19
PLOD3-201ENST00000223127 PCDHA3Q9Y5H8 950 aa13.87□□□□□ -0.19
PLOD3-201ENST00000223127 H3BRB1 525 aa13.87□□□□□ -0.19
PLOD3-201ENST00000223127 RASGRF2O14827 1237 aa13.87□□□□□ -0.19
PLOD3-201ENST00000223127 C22orf31O95567 290 aa13.87□□□□□ -0.19
PLOD3-201ENST00000223127 ITGBL1O95965 494 aaPredicted RBP13.87□□□□□ -0.19
PLOD3-201ENST00000223127 IQCF3P0C7M6 154 aa13.87□□□□□ -0.19
PLOD3-201ENST00000223127 CYP11B1P15538 503 aa13.87□□□□□ -0.19
PLOD3-201ENST00000223127 PEX19P40855 299 aa13.87□□□□□ -0.19
PLOD3-201ENST00000223127 CAPRIN2Q6IMN6 1127 aaKnown RBP13.87□□□□□ -0.19
PLOD3-201ENST00000223127 MFSD5Q6N075 450 aa13.87□□□□□ -0.19
PLOD3-201ENST00000223127 ZPBP2Q6X784 338 aa13.87□□□□□ -0.19
PLOD3-201ENST00000223127 C15orf39Q6ZRI6 1047 aa13.87□□□□□ -0.19
PLOD3-201ENST00000223127 ASRGL1Q7L266 308 aa13.87□□□□□ -0.19
PLOD3-201ENST00000223127 PRELID2Q8N945 189 aa13.87□□□□□ -0.19
PLOD3-201ENST00000223127 STMN4Q9H169 189 aaPredicted RBP13.87□□□□□ -0.19
PLOD3-201ENST00000223127 TUT1Q9H6E5 874 aaKnown RBP13.87□□□□□ -0.19
PLOD3-201ENST00000223127 ADAM22Q9P0K1 906 aa13.87□□□□□ -0.19
PLOD3-201ENST00000223127 STK38LQ9Y2H1 464 aa13.87□□□□□ -0.19
PLOD3-201ENST00000223127 PLXNB2O15031 1838 aa13.87□□□□□ -0.19
PLOD3-201ENST00000223127 ATMINO43313 823 aaPredicted RBP13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms