RNA–Protein interactions for RNA: ENST00000220429.12

GABPB1-201, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene GABPB1, Length 2,726 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-201ENST00000220429 TUFT1Q9NNX1 390 aa14.36□□□□□ -0.11
GABPB1-201ENST00000220429 DKK3Q9UBP4 350 aa14.36□□□□□ -0.11
GABPB1-201ENST00000220429 FEM1BQ9UK73 627 aa14.36□□□□□ -0.11
GABPB1-201ENST00000220429 HBS1LQ9Y450 684 aaKnown RBP14.36□□□□□ -0.11
GABPB1-201ENST00000220429 TMEM120BA0PK00 339 aa14.36□□□□□ -0.11
GABPB1-201ENST00000220429 MAPK13O15264 365 aa14.36□□□□□ -0.11
GABPB1-201ENST00000220429 SLCO1A2P46721 670 aa14.36□□□□□ -0.11
GABPB1-201ENST00000220429 TPH2Q8IWU9 490 aa14.36□□□□□ -0.11
GABPB1-201ENST00000220429 EPS8L3Q8TE67 593 aaKnown RBP14.36□□□□□ -0.11
GABPB1-201ENST00000220429 PRELID1Q9Y255 219 aa14.36□□□□□ -0.11
GABPB1-201ENST00000220429 CARD8Q9Y2G2 431 aa14.36□□□□□ -0.11
GABPB1-201ENST00000220429 TTLL3Q9Y4R7 772 aa14.36□□□□□ -0.11
GABPB1-201ENST00000220429 ASTN1O14525 1302 aa14.36□□□□□ -0.11
GABPB1-201ENST00000220429 SSU72P8A0A1W2PR75 194 aa14.35□□□□□ -0.11
GABPB1-201ENST00000220429 SFI1A8K8P3 1242 aa14.35□□□□□ -0.11
GABPB1-201ENST00000220429 CCDC188H7C350 402 aa14.35□□□□□ -0.11
GABPB1-201ENST00000220429 DDX3XO00571 662 aaKnown RBP eCLIP14.35□□□□□ -0.114e-11■■■□□ 15.2
GABPB1-201ENST00000220429 PDXKO00764 312 aa14.35□□□□□ -0.11
GABPB1-201ENST00000220429 TBCAO75347 108 aaKnown RBP14.35□□□□□ -0.11
GABPB1-201ENST00000220429 CBX6O95503 412 aa14.35□□□□□ -0.11
GABPB1-201ENST00000220429 ARP10275 920 aa14.35□□□□□ -0.11
GABPB1-201ENST00000220429 PRELPP51888 382 aa14.35□□□□□ -0.11
GABPB1-201ENST00000220429 KCNA1Q09470 495 aa14.35□□□□□ -0.11
GABPB1-201ENST00000220429 TMEM214Q6NUQ4 689 aaKnown RBP14.35□□□□□ -0.11
GABPB1-201ENST00000220429 C1orf228Q6PIY5 440 aa14.35□□□□□ -0.11
GABPB1-201ENST00000220429 KCTD17Q8N5Z5 321 aa14.35□□□□□ -0.11
GABPB1-201ENST00000220429 ACTRT1Q8TDG2 376 aa14.35□□□□□ -0.11
GABPB1-201ENST00000220429 ECSITQ9BQ95 431 aa14.35□□□□□ -0.11
GABPB1-201ENST00000220429 NDEL1Q9GZM8 345 aa14.35□□□□□ -0.11
GABPB1-201ENST00000220429 VPS33BQ9H267 617 aa14.35□□□□□ -0.11
GABPB1-201ENST00000220429 SLITRK6Q9H5Y7 841 aa14.35□□□□□ -0.11
GABPB1-201ENST00000220429 RETREG1Q9H6L5 497 aa14.35□□□□□ -0.11
GABPB1-201ENST00000220429 MLXIPLQ9NP71 852 aa14.35□□□□□ -0.11
GABPB1-201ENST00000220429 DBR1Q9UK59 544 aaKnown RBP14.35□□□□□ -0.11
GABPB1-201ENST00000220429 ASNSP08243 561 aa14.35□□□□□ -0.11
GABPB1-201ENST00000220429 NAT2P11245 290 aa14.35□□□□□ -0.11
GABPB1-201ENST00000220429 PTGER2P43116 358 aa14.35□□□□□ -0.11
GABPB1-201ENST00000220429 CDR2Q01850 454 aa14.35□□□□□ -0.11
GABPB1-201ENST00000220429 RPS6KA1Q15418 735 aa14.35□□□□□ -0.11
GABPB1-201ENST00000220429 RBM44Q6ZP01 1051 aaKnown RBP14.35□□□□□ -0.11
GABPB1-201ENST00000220429 C1orf186Q6ZWK4 172 aa14.35□□□□□ -0.11
GABPB1-201ENST00000220429 FRMD5Q7Z6J6 570 aa14.35□□□□□ -0.11
GABPB1-201ENST00000220429 FAM186BQ8IYM0 893 aa14.35□□□□□ -0.11
GABPB1-201ENST00000220429 SYN2Q92777 582 aaPredicted RBP14.35□□□□□ -0.11
GABPB1-201ENST00000220429 GBA3Q9H227 469 aa14.35□□□□□ -0.11
GABPB1-201ENST00000220429 GANQ9H2C0 597 aa14.35□□□□□ -0.11
GABPB1-201ENST00000220429 TYW1Q9NV66 732 aaKnown RBP14.35□□□□□ -0.11
GABPB1-201ENST00000220429 TRIM17Q9Y577 477 aa14.35□□□□□ -0.11
GABPB1-201ENST00000220429 GPC6Q9Y625 555 aaPredicted RBP14.35□□□□□ -0.11
GABPB1-201ENST00000220429 LOXHD1Q8IVV2 1947 aa14.35□□□□□ -0.11
GABPB1-201ENST00000220429 KRIT1O00522 736 aa14.35□□□□□ -0.11
GABPB1-201ENST00000220429 KDM1AO60341 852 aa14.35□□□□□ -0.11
GABPB1-201ENST00000220429 GAS7O60861 476 aa14.35□□□□□ -0.11
GABPB1-201ENST00000220429 GCNT3O95395 438 aa14.35□□□□□ -0.11
GABPB1-201ENST00000220429 COG7P83436 770 aa14.35□□□□□ -0.11
GABPB1-201ENST00000220429 AUHQ13825 339 aaKnown RBP14.35□□□□□ -0.11
GABPB1-201ENST00000220429 NAB2Q15742 525 aa14.35□□□□□ -0.11
GABPB1-201ENST00000220429 TDRD12Q587J7 1177 aaKnown RBP14.35□□□□□ -0.11
GABPB1-201ENST00000220429 DEPDC1Q5TB30 811 aa14.35□□□□□ -0.11
GABPB1-201ENST00000220429 DPY19L2P1Q6NXN4 242 aa14.35□□□□□ -0.11
GABPB1-201ENST00000220429 ACAD11Q709F0 780 aa14.35□□□□□ -0.11
GABPB1-201ENST00000220429 DEFB132Q7Z7B7 95 aa14.35□□□□□ -0.11
GABPB1-201ENST00000220429 CROCCP3Q8IVE0 287 aa14.35□□□□□ -0.11
GABPB1-201ENST00000220429 LSM14AQ8ND56 463 aaKnown RBP14.35□□□□□ -0.11
GABPB1-201ENST00000220429 PPP1R10Q96QC0 940 aaKnown RBP14.35□□□□□ -0.11
GABPB1-201ENST00000220429 TMEM109Q9BVC6 243 aa14.35□□□□□ -0.11
GABPB1-201ENST00000220429 TRIM31Q9BZY9 425 aa14.35□□□□□ -0.11
GABPB1-201ENST00000220429 OLFML3Q9NRN5 406 aa14.35□□□□□ -0.11
GABPB1-201ENST00000220429 WRAP73Q9P2S5 460 aaPredicted RBP14.35□□□□□ -0.11
GABPB1-201ENST00000220429 ARMCX3Q9UH62 379 aaPredicted RBP14.35□□□□□ -0.11
GABPB1-201ENST00000220429 CNOT7Q9UIV1 285 aaKnown RBP14.35□□□□□ -0.11
GABPB1-201ENST00000220429 ZNF536O15090 1300 aa14.34□□□□□ -0.11
GABPB1-201ENST00000220429 RBAK-RBAKDNI3L0D1 243 aa14.34□□□□□ -0.11
GABPB1-201ENST00000220429 PGRMC1O00264 195 aaKnown RBP14.34□□□□□ -0.11
GABPB1-201ENST00000220429 CALUO43852 315 aaPredicted RBP14.34□□□□□ -0.11
GABPB1-201ENST00000220429 DCTN3O75935 186 aa14.34□□□□□ -0.11
GABPB1-201ENST00000220429 AKAP3O75969 853 aa14.34□□□□□ -0.11
GABPB1-201ENST00000220429 HSPA8P11142 646 aaKnown RBP14.34□□□□□ -0.11
GABPB1-201ENST00000220429 EPS15P42566 896 aa14.34□□□□□ -0.11
GABPB1-201ENST00000220429 SLC9C1Q4G0N8 1177 aa14.34□□□□□ -0.11
GABPB1-201ENST00000220429 KLHDC10Q6PID8 442 aa14.34□□□□□ -0.11
GABPB1-201ENST00000220429 ANKRD42Q8N9B4 389 aa14.34□□□□□ -0.11
GABPB1-201ENST00000220429 UHMK1Q8TAS1 419 aaKnown RBP14.34□□□□□ -0.11
GABPB1-201ENST00000220429 PRPF31Q8WWY3 499 aaKnown RBP14.34□□□□□ -0.11
GABPB1-201ENST00000220429 HEPHQ9BQS7 1158 aa14.34□□□□□ -0.11
GABPB1-201ENST00000220429 ZNF577Q9BSK1 485 aa14.34□□□□□ -0.11
GABPB1-201ENST00000220429 ZNF341Q9BYN7 854 aa14.34□□□□□ -0.11
GABPB1-201ENST00000220429 PITPNM3Q9BZ71 974 aa14.34□□□□□ -0.11
GABPB1-201ENST00000220429 MRPL46Q9H2W6 279 aaKnown RBP14.34□□□□□ -0.11
GABPB1-201ENST00000220429 EHMT1Q9H9B1 1298 aa14.34□□□□□ -0.11
GABPB1-201ENST00000220429 SH3PXD2BA1X283 911 aa14.34□□□□□ -0.11
GABPB1-201ENST00000220429 CCDC160A6NGH7 325 aa14.34□□□□□ -0.11
GABPB1-201ENST00000220429 SPECC1L-ADORA2AF8WAN1 911 aa14.34□□□□□ -0.11
GABPB1-201ENST00000220429 RASGRF2O14827 1237 aa14.34□□□□□ -0.11
GABPB1-201ENST00000220429 ADAM23O75077 832 aa14.34□□□□□ -0.11
GABPB1-201ENST00000220429 NR3C1P04150 777 aa14.34□□□□□ -0.11
GABPB1-201ENST00000220429 SERPING1P05155 500 aa14.34□□□□□ -0.11
GABPB1-201ENST00000220429 GAP43P17677 238 aa14.34□□□□□ -0.11
GABPB1-201ENST00000220429 ENDOUP21128 410 aaKnown RBP14.34□□□□□ -0.11
GABPB1-201ENST00000220429 NAA20P61599 178 aa14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms