RNA–Protein interactions for RNA: ENST00000219281.7

USB1-201, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USB1, Length 2,282 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-201ENST00000219281 CYP26B1Q9NR63 512 aa18.26■□□□□ 0.51
USB1-201ENST00000219281 A0A1B0GUA9 196 aa18.25■□□□□ 0.51
USB1-201ENST00000219281 KRT1P04264 644 aa18.25■□□□□ 0.51
USB1-201ENST00000219281 PSAPP07602 524 aa18.25■□□□□ 0.51
USB1-201ENST00000219281 CCNB1P14635 433 aa18.25■□□□□ 0.51
USB1-201ENST00000219281 PECAM1P16284 738 aaPredicted RBP18.25■□□□□ 0.51
USB1-201ENST00000219281 CCND1P24385 295 aa18.25■□□□□ 0.51
USB1-201ENST00000219281 RTP1P59025 263 aa18.25■□□□□ 0.51
USB1-201ENST00000219281 PRKCEQ02156 737 aa18.25■□□□□ 0.51
USB1-201ENST00000219281 GPS1Q13098 491 aa18.25■□□□□ 0.51
USB1-201ENST00000219281 PKN2Q16513 984 aaKnown RBP18.25■□□□□ 0.51
USB1-201ENST00000219281 MFSD7Q6UXD7 560 aa18.25■□□□□ 0.51
USB1-201ENST00000219281 CEP128Q6ZU80 1094 aa18.25■□□□□ 0.51
USB1-201ENST00000219281 VSIG10LQ86VR7 867 aa18.25■□□□□ 0.51
USB1-201ENST00000219281 RCOR2Q8IZ40 523 aa18.25■□□□□ 0.51
USB1-201ENST00000219281 REPS2Q8NFH8 660 aa18.25■□□□□ 0.51
USB1-201ENST00000219281 MRRFQ96E11 262 aaKnown RBP18.25■□□□□ 0.51
USB1-201ENST00000219281 MYLK2Q9H1R3 596 aa18.25■□□□□ 0.51
USB1-201ENST00000219281 TRABDQ9H4I3 376 aa18.25■□□□□ 0.51
USB1-201ENST00000219281 ETNK1Q9HBU6 452 aa18.25■□□□□ 0.51
USB1-201ENST00000219281 PARVAQ9NVD7 372 aa18.25■□□□□ 0.51
USB1-201ENST00000219281 HIRAP54198 1017 aaPredicted RBP18.25■□□□□ 0.51
USB1-201ENST00000219281 HMGCS2P54868 508 aa18.25■□□□□ 0.51
USB1-201ENST00000219281 C1QBPQ07021 282 aaKnown RBP18.25■□□□□ 0.51
USB1-201ENST00000219281 CCDC15Q0P6D6 951 aa18.25■□□□□ 0.51
USB1-201ENST00000219281 MTERF2Q49AM1 385 aa18.25■□□□□ 0.51
USB1-201ENST00000219281 EAPPQ56P03 285 aaPredicted RBP18.25■□□□□ 0.51
USB1-201ENST00000219281 ZBTB41Q5SVQ8 909 aa18.25■□□□□ 0.51
USB1-201ENST00000219281 CCDC60Q8IWA6 550 aaPredicted RBP18.25■□□□□ 0.51
USB1-201ENST00000219281 KIRREL3Q8IZU9 778 aa18.25■□□□□ 0.51
USB1-201ENST00000219281 C4orf33Q8N1A6 199 aa18.25■□□□□ 0.51
USB1-201ENST00000219281 DENND1AQ8TEH3 1009 aa18.25■□□□□ 0.51
USB1-201ENST00000219281 GPRASP2Q96D09 838 aa18.25■□□□□ 0.51
USB1-201ENST00000219281 VPS37BQ9H9H4 285 aa18.25■□□□□ 0.51
USB1-201ENST00000219281 NOP53Q9NZM5 478 aaKnown RBP18.25■□□□□ 0.51
USB1-201ENST00000219281 IP6K2Q9UHH9 426 aa18.25■□□□□ 0.51
USB1-201ENST00000219281 PHTF1Q9UMS5 762 aa18.25■□□□□ 0.51
USB1-201ENST00000219281 UNC5CO95185 931 aa18.24■□□□□ 0.51
USB1-201ENST00000219281 KCNA2P16389 499 aa18.24■□□□□ 0.51
USB1-201ENST00000219281 KRT15P19012 456 aa18.24■□□□□ 0.51
USB1-201ENST00000219281 NR1H3Q13133 447 aa18.24■□□□□ 0.51
USB1-201ENST00000219281 ALLCQ8N6M5 410 aa18.24■□□□□ 0.51
USB1-201ENST00000219281 FBF1Q8TES7 1133 aa18.24■□□□□ 0.51
USB1-201ENST00000219281 HAUS1Q96CS2 278 aa18.24■□□□□ 0.51
USB1-201ENST00000219281 RBM41Q96IZ5 413 aaKnown RBP18.24■□□□□ 0.51
USB1-201ENST00000219281 RBAKQ9NYW8 714 aaPredicted RBP18.24■□□□□ 0.51
USB1-201ENST00000219281 STARD13Q9Y3M8 1113 aa18.24■□□□□ 0.51
USB1-201ENST00000219281 NUB1Q9Y5A7 615 aa18.24■□□□□ 0.51
USB1-201ENST00000219281 IVNS1ABPQ9Y6Y0 642 aa18.24■□□□□ 0.51
USB1-201ENST00000219281 DKC1O60832 514 aaKnown RBP eCLIP18.24■□□□□ 0.511e-5■■■■□ 25.7
USB1-201ENST00000219281 TJP3O95049 919 aa18.24■□□□□ 0.51
USB1-201ENST00000219281 SKIV2L2P42285 1042 aaKnown RBP18.24■□□□□ 0.51
USB1-201ENST00000219281 LACTBP83111 547 aaPredicted RBP18.24■□□□□ 0.51
USB1-201ENST00000219281 SPARCL1Q14515 664 aa18.24■□□□□ 0.51
USB1-201ENST00000219281 SCARA3Q6AZY7 606 aa18.24■□□□□ 0.51
USB1-201ENST00000219281 ERICH1Q86X53 443 aa18.24■□□□□ 0.51
USB1-201ENST00000219281 TMEM143Q96AN5 459 aa18.24■□□□□ 0.51
USB1-201ENST00000219281 MIEF2Q96C03 454 aa18.24■□□□□ 0.51
USB1-201ENST00000219281 KLRG1Q96E93 195 aa18.24■□□□□ 0.51
USB1-201ENST00000219281 TTC25Q96NG3 672 aa18.24■□□□□ 0.51
USB1-201ENST00000219281 ADAM33Q9BZ11 813 aa18.24■□□□□ 0.51
USB1-201ENST00000219281 SLCO1B3Q9NPD5 702 aa18.24■□□□□ 0.51
USB1-201ENST00000219281 UBN1Q9NPG3 1134 aa18.24■□□□□ 0.51
USB1-201ENST00000219281 RNF146Q9NTX7 359 aa18.24■□□□□ 0.51
USB1-201ENST00000219281 GRID1Q9ULK0 1009 aa18.24■□□□□ 0.51
USB1-201ENST00000219281 ADAMTS5Q9UNA0 930 aa18.24■□□□□ 0.51
USB1-201ENST00000219281 H0YCG3 227 aa18.23■□□□□ 0.51
USB1-201ENST00000219281 MAGEB2O15479 319 aa18.23■□□□□ 0.51
USB1-201ENST00000219281 DIAPH2O60879 1101 aa18.23■□□□□ 0.51
USB1-201ENST00000219281 POLGP54098 1239 aaPredicted RBP18.23■□□□□ 0.51
USB1-201ENST00000219281 NOP14P78316 857 aaKnown RBP18.23■□□□□ 0.51
USB1-201ENST00000219281 ACSF2Q96CM8 615 aaPredicted RBP18.23■□□□□ 0.51
USB1-201ENST00000219281 SMC6Q96SB8 1091 aa18.23■□□□□ 0.51
USB1-201ENST00000219281 PICK1Q9NRD5 415 aa18.23■□□□□ 0.51
USB1-201ENST00000219281 GPRC5DQ9NZD1 345 aa18.23■□□□□ 0.51
USB1-201ENST00000219281 SUFUQ9UMX1 484 aa18.23■□□□□ 0.51
USB1-201ENST00000219281 NFASCO94856 1347 aa18.23■□□□□ 0.51
USB1-201ENST00000219281 F8VP50 259 aa18.23■□□□□ 0.51
USB1-201ENST00000219281 PRPF4O43172 522 aaKnown RBP eCLIP18.23■□□□□ 0.51
USB1-201ENST00000219281 RGS20O76081 388 aa18.23■□□□□ 0.51
USB1-201ENST00000219281 RPA3P35244 121 aaPredicted RBP18.23■□□□□ 0.51
USB1-201ENST00000219281 ATP11AP98196 1134 aa18.23■□□□□ 0.51
USB1-201ENST00000219281 NAA25Q14CX7 972 aa18.23■□□□□ 0.51
USB1-201ENST00000219281 SETDB1Q15047 1291 aa18.23■□□□□ 0.51
USB1-201ENST00000219281 VSIG1Q86XK7 387 aa18.23■□□□□ 0.51
USB1-201ENST00000219281 TDRPQ86YL5 185 aa18.23■□□□□ 0.51
USB1-201ENST00000219281 ZBED8Q8IZ13 594 aa18.23■□□□□ 0.51
USB1-201ENST00000219281 OR5B17Q8NGF7 314 aa18.23■□□□□ 0.51
USB1-201ENST00000219281 ERP27Q96DN0 273 aa18.23■□□□□ 0.51
USB1-201ENST00000219281 JPH1Q9HDC5 661 aaPredicted RBP18.23■□□□□ 0.51
USB1-201ENST00000219281 TXLNGQ9NUQ3 528 aa18.23■□□□□ 0.51
USB1-201ENST00000219281 ANKFY1Q9P2R3 1169 aa18.23■□□□□ 0.51
USB1-201ENST00000219281 ZNF214Q9UL59 606 aaPredicted RBP18.23■□□□□ 0.51
USB1-201ENST00000219281 STYXL1Q9Y6J8 313 aa18.23■□□□□ 0.51
USB1-201ENST00000219281 TMEM191CA6NGB0 347 aa18.22■□□□□ 0.51
USB1-201ENST00000219281 TMEM191BP0C7N4 346 aa18.22■□□□□ 0.51
USB1-201ENST00000219281 ACTR2P61160 394 aa18.22■□□□□ 0.51
USB1-201ENST00000219281 ZNF252P-AS1Q0IIN9 211 aa18.22■□□□□ 0.51
USB1-201ENST00000219281 SEZ6Q53EL9 994 aa18.22■□□□□ 0.51
USB1-201ENST00000219281 TXNRD3NBQ6F5E7 133 aa18.22■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms