RNA–Protein interactions for RNA: ENST00000219084.10

CHD9-201, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 1 (best)

Gene CHD9, Length 8,739 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-201ENST00000219084 ANKRD36CQ5JPF3 1778 aa4.61□□□□□ -1.67
CHD9-201ENST00000219084 CLUHO75153 1309 aa4.61□□□□□ -1.67
CHD9-201ENST00000219084 ENO4A6NNW6 628 aa4.61□□□□□ -1.67
CHD9-201ENST00000219084 HOXB8P17481 243 aaPredicted RBP4.61□□□□□ -1.67
CHD9-201ENST00000219084 PSMA3P25788 255 aa4.61□□□□□ -1.67
CHD9-201ENST00000219084 PTPN4P29074 926 aa4.61□□□□□ -1.67
CHD9-201ENST00000219084 RECQLP46063 649 aaPredicted RBP4.61□□□□□ -1.67
CHD9-201ENST00000219084 TPI1P60174 286 aa4.61□□□□□ -1.67
CHD9-201ENST00000219084 EFHC1Q5JVL4 640 aa4.61□□□□□ -1.67
CHD9-201ENST00000219084 FASTKD5Q7L8L6 764 aaKnown RBP4.61□□□□□ -1.67
CHD9-201ENST00000219084 ATPAF2Q8N5M1 289 aa4.61□□□□□ -1.67
CHD9-201ENST00000219084 PIGOQ8TEQ8 1089 aa4.61□□□□□ -1.67
CHD9-201ENST00000219084 ARHGEF1Q92888 912 aaKnown RBP4.61□□□□□ -1.67
CHD9-201ENST00000219084 CATSPER2Q96P56 530 aa4.61□□□□□ -1.67
CHD9-201ENST00000219084 C11orf70Q9BRQ4 267 aa4.61□□□□□ -1.67
CHD9-201ENST00000219084 PAGR1Q9BTK6 254 aa4.61□□□□□ -1.67
CHD9-201ENST00000219084 ILKAPQ9H0C8 392 aaPredicted RBP4.61□□□□□ -1.67
CHD9-201ENST00000219084 VPS11Q9H270 941 aa4.61□□□□□ -1.67
CHD9-201ENST00000219084 SEC31BQ9NQW1 1179 aa4.61□□□□□ -1.67
CHD9-201ENST00000219084 PCDHGB4Q9UN71 923 aa4.61□□□□□ -1.67
CHD9-201ENST00000219084 L1RE1Q9UN81 338 aa4.61□□□□□ -1.67
CHD9-201ENST00000219084 ENTPD3O75355 529 aa4.61□□□□□ -1.67
CHD9-201ENST00000219084 GSNP06396 782 aa4.61□□□□□ -1.67
CHD9-201ENST00000219084 CYP19A1P11511 503 aaPredicted RBP4.61□□□□□ -1.67
CHD9-201ENST00000219084 RGS4P49798 205 aa4.61□□□□□ -1.67
CHD9-201ENST00000219084 CDK7P50613 346 aa4.61□□□□□ -1.67
CHD9-201ENST00000219084 ACTR2P61160 394 aa4.61□□□□□ -1.67
CHD9-201ENST00000219084 XIAPP98170 497 aa4.61□□□□□ -1.67
CHD9-201ENST00000219084 RAD51Q06609 339 aa4.61□□□□□ -1.67
CHD9-201ENST00000219084 FASTKD1Q53R41 847 aaKnown RBP4.61□□□□□ -1.67
CHD9-201ENST00000219084 COBLL1Q53SF7 1204 aa4.61□□□□□ -1.67
CHD9-201ENST00000219084 TMEM154Q6P9G4 183 aa4.61□□□□□ -1.67
CHD9-201ENST00000219084 LRRC6Q86X45 466 aa4.61□□□□□ -1.67
CHD9-201ENST00000219084 PASD1Q8IV76 773 aa4.61□□□□□ -1.67
CHD9-201ENST00000219084 SRBD1Q8N5C6 995 aaKnown RBP4.61□□□□□ -1.67
CHD9-201ENST00000219084 MCUQ8NE86 351 aa4.61□□□□□ -1.67
CHD9-201ENST00000219084 FAM210AQ96ND0 272 aa4.61□□□□□ -1.67
CHD9-201ENST00000219084 FAM213AQ9BRX8 229 aa4.61□□□□□ -1.67
CHD9-201ENST00000219084 TTC7AQ9ULT0 858 aaPredicted RBP4.61□□□□□ -1.67
CHD9-201ENST00000219084 FARP1Q9Y4F1 1045 aaPredicted RBP4.61□□□□□ -1.67
CHD9-201ENST00000219084 FAM237AA0A1B0GTK4 181 aa4.6□□□□□ -1.67
CHD9-201ENST00000219084 SERPINI2O75830 405 aa4.6□□□□□ -1.67
CHD9-201ENST00000219084 ATICP31939 592 aa4.6□□□□□ -1.67
CHD9-201ENST00000219084 CTCFP49711 727 aaPredicted RBP4.6□□□□□ -1.67
CHD9-201ENST00000219084 RAP1GDS1P52306 607 aa4.6□□□□□ -1.67
CHD9-201ENST00000219084 TMEM132DQ14C87 1099 aa4.6□□□□□ -1.67
CHD9-201ENST00000219084 QRICH1Q2TAL8 776 aa4.6□□□□□ -1.67
CHD9-201ENST00000219084 AGAP9Q5VTM2 703 aa4.6□□□□□ -1.67
CHD9-201ENST00000219084 SUSD4Q5VX71 490 aa4.6□□□□□ -1.67
CHD9-201ENST00000219084 RNF219Q5W0B1 726 aaPredicted RBP4.6□□□□□ -1.67
CHD9-201ENST00000219084 ACAD10Q6JQN1 1059 aa4.6□□□□□ -1.67
CHD9-201ENST00000219084 ANKS3Q6ZW76 656 aa4.6□□□□□ -1.67
CHD9-201ENST00000219084 GPR141Q7Z602 305 aa4.6□□□□□ -1.67
CHD9-201ENST00000219084 DYNLL2Q96FJ2 89 aa4.6□□□□□ -1.67
CHD9-201ENST00000219084 REEP2Q9BRK0 252 aa4.6□□□□□ -1.67
CHD9-201ENST00000219084 FAM167BQ9BTA0 163 aa4.6□□□□□ -1.67
CHD9-201ENST00000219084 DBR1Q9UK59 544 aaKnown RBP4.6□□□□□ -1.67
CHD9-201ENST00000219084 DRG1Q9Y295 367 aaKnown RBP4.6□□□□□ -1.67
CHD9-201ENST00000219084 SESN1Q9Y6P5 492 aa4.6□□□□□ -1.67
CHD9-201ENST00000219084 RASSF9O75901 435 aa4.6□□□□□ -1.67
CHD9-201ENST00000219084 MPOP05164 745 aa4.6□□□□□ -1.67
CHD9-201ENST00000219084 CCDC159P0C7I6 412 aa4.6□□□□□ -1.67
CHD9-201ENST00000219084 RALBP11234 206 aa4.6□□□□□ -1.67
CHD9-201ENST00000219084 SLC16A2P36021 539 aa4.6□□□□□ -1.67
CHD9-201ENST00000219084 SV2CQ496J9 727 aa4.6□□□□□ -1.67
CHD9-201ENST00000219084 MEI1Q5TIA1 1274 aa4.6□□□□□ -1.67
CHD9-201ENST00000219084 STRIP1Q5VSL9 837 aa4.6□□□□□ -1.67
CHD9-201ENST00000219084 STOX1Q6ZVD7 989 aa4.6□□□□□ -1.67
CHD9-201ENST00000219084 GMCL1P1Q8NEA9 526 aa4.6□□□□□ -1.67
CHD9-201ENST00000219084 OR6B3Q8NGW1 331 aa4.6□□□□□ -1.67
CHD9-201ENST00000219084 SPATA18Q8TC71 538 aa4.6□□□□□ -1.67
CHD9-201ENST00000219084 E2F7Q96AV8 911 aa4.6□□□□□ -1.67
CHD9-201ENST00000219084 RRN3Q9NYV6 651 aa4.6□□□□□ -1.67
CHD9-201ENST00000219084 TAGLN3Q9UI15 199 aa4.6□□□□□ -1.67
CHD9-201ENST00000219084 ADAM30Q9UKF2 790 aa4.6□□□□□ -1.67
CHD9-201ENST00000219084 MAPRE3Q9UPY8 281 aa4.6□□□□□ -1.67
CHD9-201ENST00000219084 AAR2Q9Y312 384 aaKnown RBP4.6□□□□□ -1.67
CHD9-201ENST00000219084 ZNF197O14709 1029 aa4.6□□□□□ -1.67
CHD9-201ENST00000219084 NCK2O43639 380 aa4.6□□□□□ -1.67
CHD9-201ENST00000219084 TNFAIP8O95379 198 aa4.6□□□□□ -1.67
CHD9-201ENST00000219084 ENO1P06733 434 aaKnown RBP4.6□□□□□ -1.67
CHD9-201ENST00000219084 FCER1AP12319 257 aa4.6□□□□□ -1.67
CHD9-201ENST00000219084 HOXA13P31271 388 aaPredicted RBP4.6□□□□□ -1.67
CHD9-201ENST00000219084 IL1RL1Q01638 556 aa4.6□□□□□ -1.67
CHD9-201ENST00000219084 EPS8Q12929 822 aa4.6□□□□□ -1.67
CHD9-201ENST00000219084 NCOA4Q13772 614 aa4.6□□□□□ -1.67
CHD9-201ENST00000219084 RABGAP1LQ5R372 815 aa4.6□□□□□ -1.67
CHD9-201ENST00000219084 SLC13A5Q86YT5 568 aaPredicted RBP4.6□□□□□ -1.67
CHD9-201ENST00000219084 SCUBE1Q8IWY4 988 aa4.6□□□□□ -1.67
CHD9-201ENST00000219084 SPICE1Q8N0Z3 855 aa4.6□□□□□ -1.67
CHD9-201ENST00000219084 AADATQ8N5Z0 425 aa4.6□□□□□ -1.67
CHD9-201ENST00000219084 MAGEC3Q8TD91 643 aa4.6□□□□□ -1.67
CHD9-201ENST00000219084 AENQ8WTP8 325 aaKnown RBP4.6□□□□□ -1.67
CHD9-201ENST00000219084 TFB1MQ8WVM0 346 aaKnown RBP4.6□□□□□ -1.67
CHD9-201ENST00000219084 PGM2Q96G03 612 aa4.6□□□□□ -1.67
CHD9-201ENST00000219084 NIF3L1Q9GZT8 377 aa4.6□□□□□ -1.67
CHD9-201ENST00000219084 FAM124BQ9H5Z6 455 aaPredicted RBP4.6□□□□□ -1.67
CHD9-201ENST00000219084 RAD54BQ9Y620 910 aa4.6□□□□□ -1.67
CHD9-201ENST00000219084 RIMBP3CA6NJZ7 1639 aa4.6□□□□□ -1.67
CHD9-201ENST00000219084 RIMBP3BA6NNM3 1639 aa4.6□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms