RNA–Protein interactions for RNA: ENST00000218388.8

TIMP1-201, Transcript of TIMP metallopeptidase inhibitor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TIMP1, Length 892 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP1-201ENST00000218388 PSMD5Q16401 504 aa14.08□□□□□ -0.16
TIMP1-201ENST00000218388 RTP2Q5QGT7 225 aa14.08□□□□□ -0.16
TIMP1-201ENST00000218388 PHLDB3Q6NSJ2 640 aa14.08□□□□□ -0.16
TIMP1-201ENST00000218388 RRAGAQ7L523 313 aa14.08□□□□□ -0.16
TIMP1-201ENST00000218388 LIMS2Q7Z4I7 341 aa14.08□□□□□ -0.16
TIMP1-201ENST00000218388 ARHGEF19Q8IW93 802 aa14.08□□□□□ -0.16
TIMP1-201ENST00000218388 MICAL1Q8TDZ2 1067 aa14.08□□□□□ -0.16
TIMP1-201ENST00000218388 ELMO3Q96BJ8 720 aa14.08□□□□□ -0.16
TIMP1-201ENST00000218388 MRFAP1L1Q96HT8 127 aa14.08□□□□□ -0.16
TIMP1-201ENST00000218388 TCF25Q9BQ70 676 aa14.08□□□□□ -0.16
TIMP1-201ENST00000218388 GRPEL1Q9HAV7 217 aa14.08□□□□□ -0.16
TIMP1-201ENST00000218388 SIX2Q9NPC8 291 aa14.08□□□□□ -0.16
TIMP1-201ENST00000218388 FBXL5Q9UKA1 691 aa14.08□□□□□ -0.16
TIMP1-201ENST00000218388 DNAJC12Q9UKB3 198 aa14.08□□□□□ -0.16
TIMP1-201ENST00000218388 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP14.08□□□□□ -0.16
TIMP1-201ENST00000218388 TIMM13Q9Y5L4 95 aaPredicted RBP14.08□□□□□ -0.16
TIMP1-201ENST00000218388 ITIH6Q6UXX5 1313 aa14.08□□□□□ -0.16
TIMP1-201ENST00000218388 OR6C75A6NL08 312 aa14.07□□□□□ -0.16
TIMP1-201ENST00000218388 GABRDO14764 452 aa14.07□□□□□ -0.16
TIMP1-201ENST00000218388 GRM6O15303 877 aa14.07□□□□□ -0.16
TIMP1-201ENST00000218388 OAZ2O95190 189 aa14.07□□□□□ -0.16
TIMP1-201ENST00000218388 TPM1P09493 284 aa14.07□□□□□ -0.16
TIMP1-201ENST00000218388 WEE2P0C1S8 567 aa14.07□□□□□ -0.16
TIMP1-201ENST00000218388 CD58P19256 250 aa14.07□□□□□ -0.16
TIMP1-201ENST00000218388 PBX1P40424 430 aa14.07□□□□□ -0.16
TIMP1-201ENST00000218388 RAP1GAPP47736 663 aa14.07□□□□□ -0.16
TIMP1-201ENST00000218388 KLK7P49862 253 aa14.07□□□□□ -0.16
TIMP1-201ENST00000218388 POLR2FP61218 127 aaKnown RBP14.07□□□□□ -0.16
TIMP1-201ENST00000218388 TSPY1Q01534 308 aa14.07□□□□□ -0.16
TIMP1-201ENST00000218388 INCA1Q0VD86 236 aa14.07□□□□□ -0.16
TIMP1-201ENST00000218388 RAPGEF1Q13905 1077 aa14.07□□□□□ -0.16
TIMP1-201ENST00000218388 TRIM14Q14142 442 aa14.07□□□□□ -0.16
TIMP1-201ENST00000218388 CTXN3Q4LDR2 81 aa14.07□□□□□ -0.16
TIMP1-201ENST00000218388 GPR153Q6NV75 609 aa14.07□□□□□ -0.16
TIMP1-201ENST00000218388 TAS1R1Q7RTX1 841 aa14.07□□□□□ -0.16
TIMP1-201ENST00000218388 CACNA2D4Q7Z3S7 1137 aa14.07□□□□□ -0.16
TIMP1-201ENST00000218388 UNC93AQ86WB7 457 aa14.07□□□□□ -0.16
TIMP1-201ENST00000218388 FMNL3Q8IVF7 1028 aa14.07□□□□□ -0.16
TIMP1-201ENST00000218388 GDPD5Q8WTR4 605 aa14.07□□□□□ -0.16
TIMP1-201ENST00000218388 PPP2R3CQ969Q6 453 aa14.07□□□□□ -0.16
TIMP1-201ENST00000218388 MRPL45Q9BRJ2 306 aaKnown RBP14.07□□□□□ -0.16
TIMP1-201ENST00000218388 EMILIN2Q9BXX0 1053 aa14.07□□□□□ -0.16
TIMP1-201ENST00000218388 GANQ9H2C0 597 aa14.07□□□□□ -0.16
TIMP1-201ENST00000218388 CISHQ9NSE2 258 aa14.07□□□□□ -0.16
TIMP1-201ENST00000218388 DDX43Q9NXZ2 648 aaKnown RBP14.07□□□□□ -0.16
TIMP1-201ENST00000218388 CEP72Q9P209 647 aa14.07□□□□□ -0.16
TIMP1-201ENST00000218388 BARX2Q9UMQ3 279 aaPredicted RBP14.07□□□□□ -0.16
TIMP1-201ENST00000218388 BACE2Q9Y5Z0 518 aa14.07□□□□□ -0.16
TIMP1-201ENST00000218388 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP14.06□□□□□ -0.16
TIMP1-201ENST00000218388 FSD2A1L4K1 749 aa14.06□□□□□ -0.16
TIMP1-201ENST00000218388 A8MXQ7 604 aa14.06□□□□□ -0.16
TIMP1-201ENST00000218388 C2CD2LO14523 706 aa14.06□□□□□ -0.16
TIMP1-201ENST00000218388 CXCL14O95715 111 aa14.06□□□□□ -0.16
TIMP1-201ENST00000218388 MRE11P49959 708 aa14.06□□□□□ -0.16
TIMP1-201ENST00000218388 ZNF75DP51815 510 aa14.06□□□□□ -0.16
TIMP1-201ENST00000218388 CDH8P55286 799 aa14.06□□□□□ -0.16
TIMP1-201ENST00000218388 MRPL58Q14197 206 aaKnown RBP14.06□□□□□ -0.16
TIMP1-201ENST00000218388 GSE1Q14687 1217 aa14.06□□□□□ -0.16
TIMP1-201ENST00000218388 PTPN14Q15678 1187 aa14.06□□□□□ -0.16
TIMP1-201ENST00000218388 ARHGAP44Q17R89 818 aa14.06□□□□□ -0.16
TIMP1-201ENST00000218388 FIGNQ5HY92 759 aa14.06□□□□□ -0.16
TIMP1-201ENST00000218388 KIAA0319Q5VV43 1072 aa14.06□□□□□ -0.16
TIMP1-201ENST00000218388 PLPP4Q5VZY2 271 aa14.06□□□□□ -0.16
TIMP1-201ENST00000218388 SPECC1LQ69YQ0 1117 aa14.06□□□□□ -0.16
TIMP1-201ENST00000218388 IQCEQ6IPM2 695 aa14.06□□□□□ -0.16
TIMP1-201ENST00000218388 VSTM4Q8IW00 320 aa14.06□□□□□ -0.16
TIMP1-201ENST00000218388 DCP1BQ8IZD4 617 aaKnown RBP14.06□□□□□ -0.16
TIMP1-201ENST00000218388 LNX1Q8TBB1 728 aaPredicted RBP14.06□□□□□ -0.16
TIMP1-201ENST00000218388 KBTBD7Q8WVZ9 684 aa14.06□□□□□ -0.16
TIMP1-201ENST00000218388 TNIP3Q96KP6 325 aa14.06□□□□□ -0.16
TIMP1-201ENST00000218388 B3GALT6Q96L58 329 aa14.06□□□□□ -0.16
TIMP1-201ENST00000218388 SPAG5Q96R06 1193 aa14.06□□□□□ -0.16
TIMP1-201ENST00000218388 ARID3AQ99856 593 aa14.06□□□□□ -0.16
TIMP1-201ENST00000218388 ACBD6Q9BR61 282 aa14.06□□□□□ -0.16
TIMP1-201ENST00000218388 NT5C1AQ9BXI3 368 aa14.06□□□□□ -0.16
TIMP1-201ENST00000218388 STK33Q9BYT3 514 aa14.06□□□□□ -0.16
TIMP1-201ENST00000218388 EDEM3Q9BZQ6 932 aa14.06□□□□□ -0.16
TIMP1-201ENST00000218388 SDCBP2Q9H190 292 aa14.06□□□□□ -0.16
TIMP1-201ENST00000218388 FNIP2Q9P278 1114 aa14.06□□□□□ -0.16
TIMP1-201ENST00000218388 MTRRQ9UBK8 725 aa14.06□□□□□ -0.16
TIMP1-201ENST00000218388 CDH9Q9ULB4 789 aa14.06□□□□□ -0.16
TIMP1-201ENST00000218388 STXBP5LQ9Y2K9 1186 aa14.06□□□□□ -0.16
TIMP1-201ENST00000218388 PCDHB4Q9Y5E5 795 aa14.06□□□□□ -0.16
TIMP1-201ENST00000218388 FHOD1Q9Y613 1164 aa14.06□□□□□ -0.16
TIMP1-201ENST00000218388 IRAK3Q9Y616 596 aa14.06□□□□□ -0.16
TIMP1-201ENST00000218388 RANBP2P49792 3224 aaKnown RBP14.05□□□□□ -0.16
TIMP1-201ENST00000218388 SOX1O00570 391 aaPredicted RBP14.05□□□□□ -0.16
TIMP1-201ENST00000218388 FSCN2O14926 492 aa14.05□□□□□ -0.16
TIMP1-201ENST00000218388 CILPO75339 1184 aa14.05□□□□□ -0.16
TIMP1-201ENST00000218388 NOL4O94818 638 aa14.05□□□□□ -0.16
TIMP1-201ENST00000218388 KRT5P13647 590 aa14.05□□□□□ -0.16
TIMP1-201ENST00000218388 NDUFV1P49821 464 aa14.05□□□□□ -0.16
TIMP1-201ENST00000218388 ERVFC1P60507 584 aa14.05□□□□□ -0.16
TIMP1-201ENST00000218388 APBA1Q02410 837 aa14.05□□□□□ -0.16
TIMP1-201ENST00000218388 DRAP1Q14919 205 aaPredicted RBP14.05□□□□□ -0.16
TIMP1-201ENST00000218388 MAPRE1Q15691 268 aaKnown RBP14.05□□□□□ -0.16
TIMP1-201ENST00000218388 HABP4Q5JVS0 413 aaKnown RBP14.05□□□□□ -0.16
TIMP1-201ENST00000218388 DPY19L2P1Q6NXN4 242 aa14.05□□□□□ -0.16
TIMP1-201ENST00000218388 GJB7Q6PEY0 223 aa14.05□□□□□ -0.16
TIMP1-201ENST00000218388 TMEM270Q6UE05 265 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms