RNA–Protein interactions for RNA: ENST00000216513.4

SIX4-201, Transcript of SIX homeobox 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIX4, Length 6,285 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4-201ENST00000216513 SCUBE2Q9NQ36 999 aa14.45□□□□□ -0.1
SIX4-201ENST00000216513 DDIT4Q9NX09 232 aa14.45□□□□□ -0.1
SIX4-201ENST00000216513 VPS28Q9UK41 221 aa14.45□□□□□ -0.1
SIX4-201ENST00000216513 SLC13A4Q9UKG4 626 aa14.45□□□□□ -0.1
SIX4-201ENST00000216513 USH1CQ9Y6N9 552 aa14.45□□□□□ -0.1
SIX4-201ENST00000216513 PGRMC1O00264 195 aaKnown RBP14.45□□□□□ -0.1
SIX4-201ENST00000216513 MAP4P27816 1152 aaKnown RBP14.45□□□□□ -0.1
SIX4-201ENST00000216513 CASP7P55210 303 aa14.45□□□□□ -0.1
SIX4-201ENST00000216513 OOSP2Q86WS3 158 aa14.45□□□□□ -0.1
SIX4-201ENST00000216513 ASAP3Q8TDY4 903 aa14.45□□□□□ -0.1
SIX4-201ENST00000216513 MCEEQ96PE7 176 aa14.45□□□□□ -0.1
SIX4-201ENST00000216513 VCX3BQ9H321 246 aa14.45□□□□□ -0.1
SIX4-201ENST00000216513 ABCB6Q9NP58 842 aa14.45□□□□□ -0.1
SIX4-201ENST00000216513 GGT7Q9UJ14 662 aa14.45□□□□□ -0.1
SIX4-201ENST00000216513 FBXO2Q9UK22 296 aaPredicted RBP14.45□□□□□ -0.1
SIX4-201ENST00000216513 USP20Q9Y2K6 914 aa14.45□□□□□ -0.1
SIX4-201ENST00000216513 MAPK9P45984 424 aa14.45□□□□□ -0.1
SIX4-201ENST00000216513 ROR1Q01973 937 aa14.45□□□□□ -0.1
SIX4-201ENST00000216513 MRFAP1L1Q96HT8 127 aa14.45□□□□□ -0.1
SIX4-201ENST00000216513 GPR63Q9BZJ6 419 aa14.45□□□□□ -0.1
SIX4-201ENST00000216513 PORCNQ9H237 461 aa14.45□□□□□ -0.1
SIX4-201ENST00000216513 C17orf75Q9HAS0 396 aa14.45□□□□□ -0.1
SIX4-201ENST00000216513 ACBD5Q5T8D3 534 aaPredicted RBP14.45□□□□□ -0.1
SIX4-201ENST00000216513 SHC4Q6S5L8 630 aa14.45□□□□□ -0.1
SIX4-201ENST00000216513 SKA1Q96BD8 255 aa14.45□□□□□ -0.1
SIX4-201ENST00000216513 FTHL17Q9BXU8 183 aa14.45□□□□□ -0.1
SIX4-201ENST00000216513 FBXO10Q9UK96 956 aa14.45□□□□□ -0.1
SIX4-201ENST00000216513 TBC1D3BA6NDS4 549 aa14.45□□□□□ -0.1
SIX4-201ENST00000216513 CFLARO15519 480 aa14.45□□□□□ -0.1
SIX4-201ENST00000216513 KLK7P49862 253 aa14.45□□□□□ -0.1
SIX4-201ENST00000216513 ASPHQ12797 758 aa14.45□□□□□ -0.1
SIX4-201ENST00000216513 NFE2Q16621 373 aaPredicted RBP14.45□□□□□ -0.1
SIX4-201ENST00000216513 MUM1Q2TAK8 710 aa14.45□□□□□ -0.1
SIX4-201ENST00000216513 FNDC3BQ53EP0 1204 aaKnown RBP14.45□□□□□ -0.1
SIX4-201ENST00000216513 TTC8Q8TAM2 541 aa14.45□□□□□ -0.1
SIX4-201ENST00000216513 CCHCR1Q8TD31 782 aa14.45□□□□□ -0.1
SIX4-201ENST00000216513 TRIM54Q9BYV2 358 aa14.45□□□□□ -0.1
SIX4-201ENST00000216513 RANBP17Q9H2T7 1088 aaKnown RBP14.45□□□□□ -0.1
SIX4-201ENST00000216513 BAG5Q9UL15 447 aa14.45□□□□□ -0.1
SIX4-201ENST00000216513 NDUFA10O95299 355 aa14.44□□□□□ -0.1
SIX4-201ENST00000216513 PEX19P40855 299 aa14.44□□□□□ -0.1
SIX4-201ENST00000216513 RHBDL3P58872 404 aa14.44□□□□□ -0.1
SIX4-201ENST00000216513 EPC2Q52LR7 807 aa14.44□□□□□ -0.1
SIX4-201ENST00000216513 RABGAP1LQ5R372 815 aa14.44□□□□□ -0.1
SIX4-201ENST00000216513 RNF135Q8IUD6 432 aa14.44□□□□□ -0.1
SIX4-201ENST00000216513 CCSER1Q9C0I3 900 aa14.44□□□□□ -0.1
SIX4-201ENST00000216513 WDCPQ9H6R7 721 aa14.44□□□□□ -0.1
SIX4-201ENST00000216513 GAKO14976 1311 aa14.44□□□□□ -0.1
SIX4-201ENST00000216513 ZNF185O15231 689 aa14.44□□□□□ -0.1
SIX4-201ENST00000216513 OPHN1O60890 802 aa14.44□□□□□ -0.1
SIX4-201ENST00000216513 MYBL1P10243 752 aa14.44□□□□□ -0.1
SIX4-201ENST00000216513 EFHC1Q5JVL4 640 aa14.44□□□□□ -0.1
SIX4-201ENST00000216513 CCDC149Q6ZUS6 474 aa14.44□□□□□ -0.1
SIX4-201ENST00000216513 GET4Q7L5D6 327 aaPredicted RBP14.44□□□□□ -0.1
SIX4-201ENST00000216513 TSSK1BQ9BXA7 367 aa14.44□□□□□ -0.1
SIX4-201ENST00000216513 IRX2Q9BZI1 471 aaPredicted RBP14.44□□□□□ -0.1
SIX4-201ENST00000216513 HOMER3Q9NSC5 361 aa14.44□□□□□ -0.1
SIX4-201ENST00000216513 TRIM10Q9UDY6 481 aa14.44□□□□□ -0.1
SIX4-201ENST00000216513 COL14A1Q05707 1796 aaKnown RBP14.44□□□□□ -0.1
SIX4-201ENST00000216513 PODXLO00592 558 aa14.44□□□□□ -0.1
SIX4-201ENST00000216513 SOX11P35716 441 aa14.44□□□□□ -0.1
SIX4-201ENST00000216513 C15orf52Q6ZUT6 534 aaKnown RBP14.44□□□□□ -0.1
SIX4-201ENST00000216513 PDIK1LQ8N165 341 aa14.44□□□□□ -0.1
SIX4-201ENST00000216513 CEP120Q8N960 986 aa14.44□□□□□ -0.1
SIX4-201ENST00000216513 FBXO22Q8NEZ5 403 aa14.44□□□□□ -0.1
SIX4-201ENST00000216513 PYROXD1Q8WU10 500 aa14.44□□□□□ -0.1
SIX4-201ENST00000216513 TLR8Q9NR97 1041 aaKnown RBP14.44□□□□□ -0.1
SIX4-201ENST00000216513 TCRBV5S4A2TA0A5A2 114 aa14.44□□□□□ -0.1
SIX4-201ENST00000216513 M0QYT0 321 aa14.44□□□□□ -0.1
SIX4-201ENST00000216513 SLC16A3O15427 465 aaKnown RBP14.44□□□□□ -0.1
SIX4-201ENST00000216513 FGGP02679 453 aa14.44□□□□□ -0.1
SIX4-201ENST00000216513 ADH1AP07327 375 aa14.44□□□□□ -0.1
SIX4-201ENST00000216513 FXR2P51116 673 aaKnown RBP eCLIP14.44□□□□□ -0.1
SIX4-201ENST00000216513 FBXO47Q5MNV8 452 aa14.44□□□□□ -0.1
SIX4-201ENST00000216513 ZNF410Q86VK4 478 aa14.44□□□□□ -0.1
SIX4-201ENST00000216513 FOPNLQ96NB1 174 aa14.44□□□□□ -0.1
SIX4-201ENST00000216513 NCKAP1Q9Y2A7 1128 aa14.44□□□□□ -0.1
SIX4-201ENST00000216513 RFC1P35251 1148 aaPredicted RBP14.44□□□□□ -0.1
SIX4-201ENST00000216513 FMO5P49326 533 aa14.44□□□□□ -0.1
SIX4-201ENST00000216513 POU5F1BQ06416 359 aa14.44□□□□□ -0.1
SIX4-201ENST00000216513 KIAA1324Q6UXG2 1013 aaKnown RBP14.44□□□□□ -0.1
SIX4-201ENST00000216513 CDKL3Q8IVW4 592 aaPredicted RBP14.44□□□□□ -0.1
SIX4-201ENST00000216513 MAGEB10Q96LZ2 347 aaPredicted RBP14.44□□□□□ -0.1
SIX4-201ENST00000216513 ALG13Q9NP73 1137 aaKnown RBP14.44□□□□□ -0.1
SIX4-201ENST00000216513 TLR2O60603 784 aa14.43□□□□□ -0.1
SIX4-201ENST00000216513 TSGA10IPQ3SY00 556 aa14.43□□□□□ -0.1
SIX4-201ENST00000216513 NOMO2Q5JPE7 1267 aa14.43□□□□□ -0.1
SIX4-201ENST00000216513 VSTM4Q8IW00 320 aa14.43□□□□□ -0.1
SIX4-201ENST00000216513 TTC13Q8NBP0 860 aa14.43□□□□□ -0.1
SIX4-201ENST00000216513 LRRC8CQ8TDW0 803 aa14.43□□□□□ -0.1
SIX4-201ENST00000216513 SPDL1Q96EA4 605 aa14.43□□□□□ -0.1
SIX4-201ENST00000216513 TMEM8AQ9HCN3 771 aa14.43□□□□□ -0.1
SIX4-201ENST00000216513 SNX24Q9Y343 169 aa14.43□□□□□ -0.1
SIX4-201ENST00000216513 SCAMP3O14828 347 aaKnown RBP14.43□□□□□ -0.1
SIX4-201ENST00000216513 SELPP16109 830 aa14.43□□□□□ -0.1
SIX4-201ENST00000216513 PREPLQ4J6C6 727 aaPredicted RBP14.43□□□□□ -0.1
SIX4-201ENST00000216513 TAF1BQ53T94 588 aaPredicted RBP14.43□□□□□ -0.1
SIX4-201ENST00000216513 CELF4Q9BZC1 486 aaKnown RBP14.43□□□□□ -0.1
SIX4-201ENST00000216513 LCMT1Q9UIC8 334 aa14.43□□□□□ -0.1
SIX4-201ENST00000216513 TPX2Q9ULW0 747 aaKnown RBP14.43□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms