RNA–Protein interactions for RNA: ENST00000216099.12

APOBEC3D-201, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3D, humanhuman

APPRIS P1 TSL 2 BASIC

Gene APOBEC3D, Length 2,528 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3D-201ENST00000216099 DMRTB1Q96MA1 342 aa11.31□□□□□ -0.6
APOBEC3D-201ENST00000216099 POP1Q99575 1024 aaKnown RBP11.31□□□□□ -0.6
APOBEC3D-201ENST00000216099 CGRRF1Q99675 332 aa11.31□□□□□ -0.6
APOBEC3D-201ENST00000216099 R3HDMLQ9H3Y0 253 aa11.31□□□□□ -0.6
APOBEC3D-201ENST00000216099 AASDHPPTQ9NRN7 309 aa11.31□□□□□ -0.6
APOBEC3D-201ENST00000216099 C1orf112Q9NSG2 853 aa11.31□□□□□ -0.6
APOBEC3D-201ENST00000216099 TAS2R14Q9NYV8 317 aa11.31□□□□□ -0.6
APOBEC3D-201ENST00000216099 SMARCAL1Q9NZC9 954 aa11.31□□□□□ -0.6
APOBEC3D-201ENST00000216099 PACSIN2Q9UNF0 486 aaPredicted RBP11.31□□□□□ -0.6
APOBEC3D-201ENST00000216099 KLHL33A6NCF5 533 aa11.3□□□□□ -0.6
APOBEC3D-201ENST00000216099 PGRMC1O00264 195 aaKnown RBP11.3□□□□□ -0.6
APOBEC3D-201ENST00000216099 BUB1BO60566 1050 aaPredicted RBP11.3□□□□□ -0.6
APOBEC3D-201ENST00000216099 PGK2P07205 417 aa11.3□□□□□ -0.6
APOBEC3D-201ENST00000216099 ATP1A2P50993 1020 aa11.3□□□□□ -0.6
APOBEC3D-201ENST00000216099 AP3M2P53677 418 aa11.3□□□□□ -0.6
APOBEC3D-201ENST00000216099 NLRP11P59045 1033 aaKnown RBP11.3□□□□□ -0.6
APOBEC3D-201ENST00000216099 GPC5P78333 572 aa11.3□□□□□ -0.6
APOBEC3D-201ENST00000216099 ITKQ08881 620 aa11.3□□□□□ -0.6
APOBEC3D-201ENST00000216099 ZSCAN26Q16670 478 aa11.3□□□□□ -0.6
APOBEC3D-201ENST00000216099 DNAAF5Q86Y56 855 aa11.3□□□□□ -0.6
APOBEC3D-201ENST00000216099 PALB2Q86YC2 1186 aa11.3□□□□□ -0.6
APOBEC3D-201ENST00000216099 METTL13Q8N6R0 699 aa11.3□□□□□ -0.6
APOBEC3D-201ENST00000216099 ARHGEF26Q96DR7 871 aa11.3□□□□□ -0.6
APOBEC3D-201ENST00000216099 FNBP1Q96RU3 617 aa11.3□□□□□ -0.6
APOBEC3D-201ENST00000216099 HAPLN2Q9GZV7 340 aa11.3□□□□□ -0.6
APOBEC3D-201ENST00000216099 THAP2Q9H0W7 228 aa11.3□□□□□ -0.6
APOBEC3D-201ENST00000216099 C2orf40Q9H1Z8 148 aa11.3□□□□□ -0.6
APOBEC3D-201ENST00000216099 RETREG1Q9H6L5 497 aa11.3□□□□□ -0.6
APOBEC3D-201ENST00000216099 SEPT11Q9NVA2 429 aaKnown RBP11.3□□□□□ -0.6
APOBEC3D-201ENST00000216099 KAT6AQ92794 2004 aa11.3□□□□□ -0.6
APOBEC3D-201ENST00000216099 ZBTB42B2RXF5 422 aa11.3□□□□□ -0.6
APOBEC3D-201ENST00000216099 CCDC188H7C350 402 aa11.3□□□□□ -0.6
APOBEC3D-201ENST00000216099 NOP56O00567 594 aaKnown RBP11.3□□□□□ -0.6
APOBEC3D-201ENST00000216099 CYP26A1O43174 497 aa11.3□□□□□ -0.6
APOBEC3D-201ENST00000216099 FTLP02792 175 aaPredicted RBP11.3□□□□□ -0.6
APOBEC3D-201ENST00000216099 DLATP10515 647 aaKnown RBP11.3□□□□□ -0.6
APOBEC3D-201ENST00000216099 CYP11B1P15538 503 aa11.3□□□□□ -0.6
APOBEC3D-201ENST00000216099 AARSP49588 968 aaKnown RBP eCLIP11.3□□□□□ -0.6
APOBEC3D-201ENST00000216099 PDE6CP51160 858 aa11.3□□□□□ -0.6
APOBEC3D-201ENST00000216099 CCNA1P78396 465 aa11.3□□□□□ -0.6
APOBEC3D-201ENST00000216099 FMO1Q01740 532 aa11.3□□□□□ -0.6
APOBEC3D-201ENST00000216099 NNTQ13423 1086 aa11.3□□□□□ -0.6
APOBEC3D-201ENST00000216099 ILDR2Q71H61 639 aa11.3□□□□□ -0.6
APOBEC3D-201ENST00000216099 ZNF677Q86XU0 584 aa11.3□□□□□ -0.6
APOBEC3D-201ENST00000216099 EIF1ADQ8N9N8 165 aaKnown RBP11.3□□□□□ -0.6
APOBEC3D-201ENST00000216099 USP33Q8TEY7 942 aa11.3□□□□□ -0.6
APOBEC3D-201ENST00000216099 SLC10A4Q96EP9 437 aa11.3□□□□□ -0.6
APOBEC3D-201ENST00000216099 PCDHB18PQ96TA0 734 aa11.3□□□□□ -0.6
APOBEC3D-201ENST00000216099 MSTO1Q9BUK6 570 aa11.3□□□□□ -0.6
APOBEC3D-201ENST00000216099 MRPL4Q9BYD3 311 aaKnown RBP11.3□□□□□ -0.6
APOBEC3D-201ENST00000216099 SMARCAD1Q9H4L7 1026 aa11.3□□□□□ -0.6
APOBEC3D-201ENST00000216099 RBAKQ9NYW8 714 aaPredicted RBP11.3□□□□□ -0.6
APOBEC3D-201ENST00000216099 TMCO5BA8MYB1 307 aa11.29□□□□□ -0.6
APOBEC3D-201ENST00000216099 DDX3YO15523 660 aaKnown RBP11.29□□□□□ -0.6
APOBEC3D-201ENST00000216099 KIF1CO43896 1103 aaKnown RBP11.29□□□□□ -0.6
APOBEC3D-201ENST00000216099 HLA-DRAP01903 254 aa11.29□□□□□ -0.6
APOBEC3D-201ENST00000216099 CYP1A2P05177 515 aa11.29□□□□□ -0.6
APOBEC3D-201ENST00000216099 OAS2P29728 719 aaKnown RBP11.29□□□□□ -0.6
APOBEC3D-201ENST00000216099 BPIFB4P59827 614 aa11.29□□□□□ -0.6
APOBEC3D-201ENST00000216099 TTLL4Q14679 1199 aa11.29□□□□□ -0.6
APOBEC3D-201ENST00000216099 PLCB4Q15147 1175 aa11.29□□□□□ -0.6
APOBEC3D-201ENST00000216099 IFT20Q8IY31 132 aa11.29□□□□□ -0.6
APOBEC3D-201ENST00000216099 ABRAQ8N0Z2 381 aa11.29□□□□□ -0.6
APOBEC3D-201ENST00000216099 DDX1Q92499 740 aaKnown RBP11.29□□□□□ -0.6
APOBEC3D-201ENST00000216099 TARS2Q9BW92 718 aaKnown RBP11.29□□□□□ -0.6
APOBEC3D-201ENST00000216099 RHOBTB2Q9BYZ6 727 aa11.29□□□□□ -0.6
APOBEC3D-201ENST00000216099 OSGEPQ9NPF4 335 aa11.29□□□□□ -0.6
APOBEC3D-201ENST00000216099 GDF3Q9NR23 364 aa11.29□□□□□ -0.6
APOBEC3D-201ENST00000216099 UBP1Q9NZI7 540 aa11.29□□□□□ -0.6
APOBEC3D-201ENST00000216099 CNTNAP2Q9UHC6 1331 aa11.29□□□□□ -0.6
APOBEC3D-201ENST00000216099 RALGAPA2Q2PPJ7 1873 aa11.29□□□□□ -0.6
APOBEC3D-201ENST00000216099 MIF4GDA9UHW6 222 aaKnown RBP11.29□□□□□ -0.6
APOBEC3D-201ENST00000216099 CEP104O60308 925 aa11.29□□□□□ -0.6
APOBEC3D-201ENST00000216099 NAT2P11245 290 aa11.29□□□□□ -0.6
APOBEC3D-201ENST00000216099 CETPP11597 493 aa11.29□□□□□ -0.6
APOBEC3D-201ENST00000216099 ABCB4P21439 1286 aa11.29□□□□□ -0.6
APOBEC3D-201ENST00000216099 USP8P40818 1118 aa11.29□□□□□ -0.6
APOBEC3D-201ENST00000216099 EPHB4P54760 987 aa11.29□□□□□ -0.6
APOBEC3D-201ENST00000216099 ALFQ53S48 1182 aa11.29□□□□□ -0.6
APOBEC3D-201ENST00000216099 WDR44Q5JSH3 913 aa11.29□□□□□ -0.6
APOBEC3D-201ENST00000216099 TDRD10Q5VZ19 366 aaKnown RBP11.29□□□□□ -0.6
APOBEC3D-201ENST00000216099 EMBQ6PCB8 327 aa11.29□□□□□ -0.6
APOBEC3D-201ENST00000216099 EEPD1Q7L9B9 569 aa11.29□□□□□ -0.6
APOBEC3D-201ENST00000216099 SLC47A2Q86VL8 602 aa11.29□□□□□ -0.6
APOBEC3D-201ENST00000216099 BRSK2Q8IWQ3 736 aa11.29□□□□□ -0.6
APOBEC3D-201ENST00000216099 ZBTB8OSQ8IWT0 167 aa11.29□□□□□ -0.6
APOBEC3D-201ENST00000216099 GOLGA6L1Q8N7Z2 621 aa11.29□□□□□ -0.6
APOBEC3D-201ENST00000216099 EPS8L3Q8TE67 593 aaKnown RBP11.29□□□□□ -0.6
APOBEC3D-201ENST00000216099 PRPF31Q8WWY3 499 aaKnown RBP11.29□□□□□ -0.6
APOBEC3D-201ENST00000216099 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP11.29□□□□□ -0.6
APOBEC3D-201ENST00000216099 GLG1Q92896 1179 aa11.29□□□□□ -0.6
APOBEC3D-201ENST00000216099 TATDN2Q93075 761 aa11.29□□□□□ -0.6
APOBEC3D-201ENST00000216099 CAVIN3Q969G5 261 aa11.29□□□□□ -0.6
APOBEC3D-201ENST00000216099 SPATA33Q96N06 139 aa11.29□□□□□ -0.6
APOBEC3D-201ENST00000216099 CARD9Q9H257 536 aa11.29□□□□□ -0.6
APOBEC3D-201ENST00000216099 VTA1Q9NP79 307 aa11.29□□□□□ -0.6
APOBEC3D-201ENST00000216099 ZNF180Q9UJW8 692 aa11.29□□□□□ -0.6
APOBEC3D-201ENST00000216099 GTF3C4Q9UKN8 822 aa11.29□□□□□ -0.6
APOBEC3D-201ENST00000216099 COG5Q9UP83 839 aa11.29□□□□□ -0.6
APOBEC3D-201ENST00000216099 TRPM7Q96QT4 1865 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms