RNA–Protein interactions for RNA: ENST00000043402.7

RTN4R-201, Transcript of reticulon 4 receptor, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RTN4R, Length 2,157 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4R-201ENST00000043402 RABEP2Q9H5N1 569 aa27.64■■■□□ 2.02
RTN4R-201ENST00000043402 CLEC11AQ9Y240 323 aa27.64■■■□□ 2.02
RTN4R-201ENST00000043402 SLC45A1Q9Y2W3 748 aa27.64■■■□□ 2.02
RTN4R-201ENST00000043402 NUDT17P0C025 328 aa27.63■■■□□ 2.01
RTN4R-201ENST00000043402 ARF4P18085 180 aaPredicted RBP27.63■■■□□ 2.01
RTN4R-201ENST00000043402 HPDP32754 393 aaPredicted RBP27.63■■■□□ 2.01
RTN4R-201ENST00000043402 KRT71Q3SY84 523 aa27.63■■■□□ 2.01
RTN4R-201ENST00000043402 BCO2Q9BYV7 579 aa27.63■■■□□ 2.01
RTN4R-201ENST00000043402 BCCIPQ9P287 314 aaKnown RBP eCLIP27.63■■■□□ 2.01
RTN4R-201ENST00000043402 MTRF1LQ9UGC7 380 aaKnown RBP27.63■■■□□ 2.01
RTN4R-201ENST00000043402 IQCA1LA6NCM1 817 aa27.63■■■□□ 2.01
RTN4R-201ENST00000043402 STRNO43815 780 aa27.63■■■□□ 2.01
RTN4R-201ENST00000043402 MCF2P10911 925 aa27.63■■■□□ 2.01
RTN4R-201ENST00000043402 PPP1R15BQ5SWA1 713 aa27.63■■■□□ 2.01
RTN4R-201ENST00000043402 MTHFD1LQ6UB35 978 aa27.63■■■□□ 2.01
RTN4R-201ENST00000043402 EXD1Q8NHP7 514 aa27.63■■■□□ 2.01
RTN4R-201ENST00000043402 FAM118BQ9BPY3 351 aa27.63■■■□□ 2.01
RTN4R-201ENST00000043402 OSBPL8Q9BZF1 889 aa27.63■■■□□ 2.01
RTN4R-201ENST00000043402 KLHL11Q9NVR0 708 aa27.63■■■□□ 2.01
RTN4R-201ENST00000043402 MORF4L1Q9UBU8 362 aa27.63■■■□□ 2.01
RTN4R-201ENST00000043402 IVNS1ABPQ9Y6Y0 642 aa27.63■■■□□ 2.01
RTN4R-201ENST00000043402 DCDC2CA8MYV0 355 aa27.62■■■□□ 2.01
RTN4R-201ENST00000043402 F8VP50 259 aa27.62■■■□□ 2.01
RTN4R-201ENST00000043402 H3BRB1 525 aa27.62■■■□□ 2.01
RTN4R-201ENST00000043402 IVDP26440 423 aa27.62■■■□□ 2.01
RTN4R-201ENST00000043402 EIF3BP55884 814 aaKnown RBP27.62■■■□□ 2.01
RTN4R-201ENST00000043402 CYP4A22Q5TCH4 519 aa27.62■■■□□ 2.01
RTN4R-201ENST00000043402 AGBL2Q5U5Z8 902 aa27.62■■■□□ 2.01
RTN4R-201ENST00000043402 DENND1BQ6P3S1 775 aa27.62■■■□□ 2.01
RTN4R-201ENST00000043402 DNAJC24Q6P3W2 148 aa27.62■■■□□ 2.01
RTN4R-201ENST00000043402 ZNF467Q7Z7K2 595 aaPredicted RBP27.62■■■□□ 2.01
RTN4R-201ENST00000043402 TUT1Q9H6E5 874 aaKnown RBP27.62■■■□□ 2.01
RTN4R-201ENST00000043402 ITGB3P05106 788 aa27.62■■■□□ 2.01
RTN4R-201ENST00000043402 TMOD1P28289 359 aa27.62■■■□□ 2.01
RTN4R-201ENST00000043402 GTF2A2P52657 109 aa27.62■■■□□ 2.01
RTN4R-201ENST00000043402 LACTBP83111 547 aaPredicted RBP27.62■■■□□ 2.01
RTN4R-201ENST00000043402 IFFO1Q0D2I5 559 aa27.62■■■□□ 2.01
RTN4R-201ENST00000043402 SLC29A2Q14542 456 aa27.62■■■□□ 2.01
RTN4R-201ENST00000043402 SLC10A6Q3KNW5 377 aa27.62■■■□□ 2.01
RTN4R-201ENST00000043402 ZNF667Q5HYK9 610 aa27.62■■■□□ 2.01
RTN4R-201ENST00000043402 PNMA8AQ86V59 439 aaPredicted RBP27.62■■■□□ 2.01
RTN4R-201ENST00000043402 CYTH4Q9UIA0 394 aa27.62■■■□□ 2.01
RTN4R-201ENST00000043402 NOVA2Q9UNW9 492 aaKnown RBP27.62■■■□□ 2.01
RTN4R-201ENST00000043402 A6NNZ2 444 aa27.61■■■□□ 2.01
RTN4R-201ENST00000043402 ADCY2Q08462 1091 aa27.61■■■□□ 2.01
RTN4R-201ENST00000043402 ORC1Q13415 861 aa27.61■■■□□ 2.01
RTN4R-201ENST00000043402 SKIDA1Q1XH10 827 aa27.61■■■□□ 2.01
RTN4R-201ENST00000043402 TUBB8Q3ZCM7 444 aa27.61■■■□□ 2.01
RTN4R-201ENST00000043402 GPR142Q7Z601 462 aa27.61■■■□□ 2.01
RTN4R-201ENST00000043402 ERICH1Q86X53 443 aa27.61■■■□□ 2.01
RTN4R-201ENST00000043402 SMPD1P17405 629 aa27.6■■■□□ 2.01
RTN4R-201ENST00000043402 RAD23BP54727 409 aa27.6■■■□□ 2.01
RTN4R-201ENST00000043402 MARCH8Q5T0T0 291 aa27.6■■■□□ 2.01
RTN4R-201ENST00000043402 BCAS4Q8TDM0 211 aa27.6■■■□□ 2.01
RTN4R-201ENST00000043402 SMYD3Q9H7B4 428 aa27.6■■■□□ 2.01
RTN4R-201ENST00000043402 WHRNQ9P202 907 aa27.6■■■□□ 2.01
RTN4R-201ENST00000043402 TJP2Q9UDY2 1190 aa27.6■■■□□ 2.01
RTN4R-201ENST00000043402 COL1A2P08123 1366 aa27.6■■■□□ 2.01
RTN4R-201ENST00000043402 UNCXA6NJT0 531 aa27.6■■■□□ 2.01
RTN4R-201ENST00000043402 ZEB2O60315 1214 aa27.6■■■□□ 2.01
RTN4R-201ENST00000043402 ITGBL1O95965 494 aaPredicted RBP27.6■■■□□ 2.01
RTN4R-201ENST00000043402 CD19P15391 556 aa27.6■■■□□ 2.01
RTN4R-201ENST00000043402 FGFR4P22455 802 aa27.6■■■□□ 2.01
RTN4R-201ENST00000043402 MDH1P40925 334 aaKnown RBP27.6■■■□□ 2.01
RTN4R-201ENST00000043402 GCLCP48506 637 aaPredicted RBP27.6■■■□□ 2.01
RTN4R-201ENST00000043402 TNFAIP2Q03169 654 aa27.6■■■□□ 2.01
RTN4R-201ENST00000043402 PTK6Q13882 451 aa27.6■■■□□ 2.01
RTN4R-201ENST00000043402 TRIP13Q15645 432 aaPredicted RBP27.6■■■□□ 2.01
RTN4R-201ENST00000043402 PTPN20Q4JDL3 420 aa27.6■■■□□ 2.01
RTN4R-201ENST00000043402 DENND2CQ68D51 928 aa27.6■■■□□ 2.01
RTN4R-201ENST00000043402 TWNKQ96RR1 684 aa27.6■■■□□ 2.01
RTN4R-201ENST00000043402 HMGXB4Q9UGU5 601 aa27.6■■■□□ 2.01
RTN4R-201ENST00000043402 ASIC3Q9UHC3 531 aa27.6■■■□□ 2.01
RTN4R-201ENST00000043402 RSPH14Q9UHP6 348 aa27.6■■■□□ 2.01
RTN4R-201ENST00000043402 NEU2Q9Y3R4 380 aa27.6■■■□□ 2.01
RTN4R-201ENST00000043402 PI4K2BG5E9Z4 385 aa27.59■■■□□ 2.01
RTN4R-201ENST00000043402 LSP1P33241 339 aa27.59■■■□□ 2.01
RTN4R-201ENST00000043402 YWHAEP62258 255 aaKnown RBP27.59■■■□□ 2.01
RTN4R-201ENST00000043402 CALCOCO2Q13137 446 aa27.59■■■□□ 2.01
RTN4R-201ENST00000043402 TXNRD3NBQ6F5E7 133 aa27.59■■■□□ 2.01
RTN4R-201ENST00000043402 DCUN1D2Q6PH85 259 aa27.59■■■□□ 2.01
RTN4R-201ENST00000043402 ANKRD23Q86SG2 305 aa27.59■■■□□ 2.01
RTN4R-201ENST00000043402 DPP9Q86TI2 863 aa27.59■■■□□ 2.01
RTN4R-201ENST00000043402 ATL2Q8NHH9 583 aa27.59■■■□□ 2.01
RTN4R-201ENST00000043402 MAML3Q96JK9 1138 aa27.59■■■□□ 2.01
RTN4R-201ENST00000043402 AAASQ9NRG9 546 aa27.59■■■□□ 2.01
RTN4R-201ENST00000043402 CAND2O75155 1236 aa27.59■■■□□ 2.01
RTN4R-201ENST00000043402 RARGP13631 454 aa27.59■■■□□ 2.01
RTN4R-201ENST00000043402 PPARDQ03181 441 aa27.59■■■□□ 2.01
RTN4R-201ENST00000043402 NFX1Q12986 1120 aaKnown RBP27.59■■■□□ 2.01
RTN4R-201ENST00000043402 CCNG2Q16589 344 aa27.59■■■□□ 2.01
RTN4R-201ENST00000043402 ILDR2Q71H61 639 aa27.59■■■□□ 2.01
RTN4R-201ENST00000043402 C3orf20Q8ND61 904 aa27.59■■■□□ 2.01
RTN4R-201ENST00000043402 NLRP7Q8WX94 980 aa27.59■■■□□ 2.01
RTN4R-201ENST00000043402 SLC12A6Q9UHW9 1150 aa27.59■■■□□ 2.01
RTN4R-201ENST00000043402 TULP2O00295 520 aa27.58■■■□□ 2.01
RTN4R-201ENST00000043402 GRB14Q14449 540 aa27.58■■■□□ 2.01
RTN4R-201ENST00000043402 RHBDF2Q6PJF5 856 aa27.58■■■□□ 2.01
RTN4R-201ENST00000043402 SLC4A11Q8NBS3 891 aa27.58■■■□□ 2.01
RTN4R-201ENST00000043402 CCDC114Q96M63 670 aa27.58■■■□□ 2.01
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms