RNA–Protein interactions for RNA: ENST00000040877.1

TARBP1-201, Transcript of TAR (HIV-1) RNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TARBP1, Length 5,130 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARBP1-201ENST00000040877 ZNF518BQ9C0D4 1074 aa24.24■■□□□ 1.47
TARBP1-201ENST00000040877 CST8O60676 142 aa24.24■■□□□ 1.47
TARBP1-201ENST00000040877 ALDH1A3P47895 512 aa24.24■■□□□ 1.47
TARBP1-201ENST00000040877 TRIM65Q6PJ69 517 aa24.24■■□□□ 1.47
TARBP1-201ENST00000040877 NDUFS3O75489 264 aa24.24■■□□□ 1.47
TARBP1-201ENST00000040877 NAPEPLDQ6IQ20 393 aa24.24■■□□□ 1.47
TARBP1-201ENST00000040877 TRIML2Q8N7C3 387 aa24.24■■□□□ 1.47
TARBP1-201ENST00000040877 TLR2O60603 784 aa24.24■■□□□ 1.47
TARBP1-201ENST00000040877 POLBP06746 335 aa24.24■■□□□ 1.47
TARBP1-201ENST00000040877 CXCL9Q07325 125 aa24.24■■□□□ 1.47
TARBP1-201ENST00000040877 PIP4K2CQ8TBX8 421 aa24.24■■□□□ 1.47
TARBP1-201ENST00000040877 PSTPIP1O43586 416 aa24.23■■□□□ 1.47
TARBP1-201ENST00000040877 TGFB3P10600 412 aa24.23■■□□□ 1.47
TARBP1-201ENST00000040877 LRRC14Q15048 493 aa24.23■■□□□ 1.47
TARBP1-201ENST00000040877 AGBL2Q5U5Z8 902 aa24.23■■□□□ 1.47
TARBP1-201ENST00000040877 LCA5Q86VQ0 697 aa24.23■■□□□ 1.47
TARBP1-201ENST00000040877 SLC26A7Q8TE54 656 aa24.23■■□□□ 1.47
TARBP1-201ENST00000040877 KIAA1683Q9H0B3 1180 aa24.23■■□□□ 1.47
TARBP1-201ENST00000040877 DDX52Q9Y2R4 599 aaKnown RBP eCLIP24.23■■□□□ 1.47
TARBP1-201ENST00000040877 VDRP11473 427 aa24.23■■□□□ 1.47
TARBP1-201ENST00000040877 FKBP1AP62942 108 aaKnown RBP24.23■■□□□ 1.47
TARBP1-201ENST00000040877 AP2B1P63010 937 aa24.23■■□□□ 1.47
TARBP1-201ENST00000040877 MFN1Q8IWA4 741 aa24.23■■□□□ 1.47
TARBP1-201ENST00000040877 MUC3BQ9H195 1237 aa24.23■■□□□ 1.47
TARBP1-201ENST00000040877 PXMP2Q9NR77 195 aa24.23■■□□□ 1.47
TARBP1-201ENST00000040877 AFF4Q9UHB7 1163 aaKnown RBP24.23■■□□□ 1.47
TARBP1-201ENST00000040877 NAGPAQ9UK23 515 aa24.23■■□□□ 1.47
TARBP1-201ENST00000040877 DBR1Q9UK59 544 aaKnown RBP24.23■■□□□ 1.47
TARBP1-201ENST00000040877 PYGLP06737 847 aa24.23■■□□□ 1.47
TARBP1-201ENST00000040877 MAP4P27816 1152 aaKnown RBP24.23■■□□□ 1.47
TARBP1-201ENST00000040877 STIP1P31948 543 aaKnown RBP24.23■■□□□ 1.47
TARBP1-201ENST00000040877 FNTAP49354 379 aa24.23■■□□□ 1.47
TARBP1-201ENST00000040877 MMGT1Q8N4V1 131 aa24.23■■□□□ 1.47
TARBP1-201ENST00000040877 SMYD3Q9H7B4 428 aa24.23■■□□□ 1.47
TARBP1-201ENST00000040877 ADA2Q9NZK5 511 aa24.23■■□□□ 1.47
TARBP1-201ENST00000040877 KLRC1P26715 233 aa24.23■■□□□ 1.47
TARBP1-201ENST00000040877 PCSK9Q8NBP7 692 aaKnown RBP24.23■■□□□ 1.47
TARBP1-201ENST00000040877 ERP44Q9BS26 406 aa24.23■■□□□ 1.47
TARBP1-201ENST00000040877 UPP2O95045 317 aa24.22■■□□□ 1.47
TARBP1-201ENST00000040877 ARP10275 920 aa24.22■■□□□ 1.47
TARBP1-201ENST00000040877 EPHX2P34913 555 aa24.22■■□□□ 1.47
TARBP1-201ENST00000040877 NPTX2P47972 431 aa24.22■■□□□ 1.47
TARBP1-201ENST00000040877 GIT2Q14161 759 aa24.22■■□□□ 1.47
TARBP1-201ENST00000040877 PI4K2AQ9BTU6 479 aa24.22■■□□□ 1.47
TARBP1-201ENST00000040877 AGXT2Q9BYV1 514 aa24.22■■□□□ 1.47
TARBP1-201ENST00000040877 METTL5Q9NRN9 209 aaKnown RBP24.22■■□□□ 1.47
TARBP1-201ENST00000040877 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP24.22■■□□□ 1.473e-7■□□□□ 10.2
TARBP1-201ENST00000040877 H7C4K7 107 aa24.22■■□□□ 1.47
TARBP1-201ENST00000040877 PPP1R37O75864 691 aa24.22■■□□□ 1.47
TARBP1-201ENST00000040877 BRD2P25440 801 aaKnown RBP24.22■■□□□ 1.47
TARBP1-201ENST00000040877 C9orf131Q5VYM1 1079 aa24.22■■□□□ 1.47
TARBP1-201ENST00000040877 CGRRF1Q99675 332 aa24.22■■□□□ 1.47
TARBP1-201ENST00000040877 PDCD2LQ9BRP1 358 aa24.22■■□□□ 1.47
TARBP1-201ENST00000040877 ETNK1Q9HBU6 452 aa24.22■■□□□ 1.47
TARBP1-201ENST00000040877 BCL9O00512 1426 aa24.22■■□□□ 1.47
TARBP1-201ENST00000040877 MAPTP10636 758 aaKnown RBP24.22■■□□□ 1.47
TARBP1-201ENST00000040877 OAZ1P54368 228 aa24.22■■□□□ 1.47
TARBP1-201ENST00000040877 ATP6V0D2Q8N8Y2 350 aa24.22■■□□□ 1.47
TARBP1-201ENST00000040877 RBM12Q9NTZ6 932 aaKnown RBP24.22■■□□□ 1.47
TARBP1-201ENST00000040877 DDTLA6NHG4 134 aaPredicted RBP24.22■■□□□ 1.47
TARBP1-201ENST00000040877 CFAP99D6REC4 459 aa24.22■■□□□ 1.47
TARBP1-201ENST00000040877 F9P00740 461 aa24.22■■□□□ 1.47
TARBP1-201ENST00000040877 TDRD10Q5VZ19 366 aaKnown RBP24.22■■□□□ 1.47
TARBP1-201ENST00000040877 LINC00523Q86TU6 105 aa24.22■■□□□ 1.47
TARBP1-201ENST00000040877 UBA3Q8TBC4 463 aa24.22■■□□□ 1.47
TARBP1-201ENST00000040877 LZICQ8WZA0 190 aa24.22■■□□□ 1.47
TARBP1-201ENST00000040877 DNAJC7Q99615 494 aa24.22■■□□□ 1.47
TARBP1-201ENST00000040877 XAB2Q9HCS7 855 aaKnown RBP24.22■■□□□ 1.47
TARBP1-201ENST00000040877 SCAF8Q9UPN6 1271 aaKnown RBP24.22■■□□□ 1.47
TARBP1-201ENST00000040877 ARL2BPQ9Y2Y0 163 aa24.22■■□□□ 1.47
TARBP1-201ENST00000040877 GRAP2O75791 330 aa24.21■■□□□ 1.47
TARBP1-201ENST00000040877 HMBSP08397 361 aa24.21■■□□□ 1.47
TARBP1-201ENST00000040877 HOXC6P09630 235 aa24.21■■□□□ 1.47
TARBP1-201ENST00000040877 RALBP11234 206 aa24.21■■□□□ 1.47
TARBP1-201ENST00000040877 METTL7BQ6UX53 244 aa24.21■■□□□ 1.47
TARBP1-201ENST00000040877 SPATA21Q7Z572 469 aa24.21■■□□□ 1.47
TARBP1-201ENST00000040877 DDX53Q86TM3 631 aaKnown RBP24.21■■□□□ 1.47
TARBP1-201ENST00000040877 CHSY1Q86X52 802 aa24.21■■□□□ 1.47
TARBP1-201ENST00000040877 NCAM1P13591 858 aa24.21■■□□□ 1.47
TARBP1-201ENST00000040877 ARHGEF7Q14155 803 aa24.21■■□□□ 1.47
TARBP1-201ENST00000040877 USP10Q14694 798 aaKnown RBP24.21■■□□□ 1.47
TARBP1-201ENST00000040877 YY1AP1Q9H869 796 aa24.21■■□□□ 1.47
TARBP1-201ENST00000040877 GBA2Q9HCG7 927 aaPredicted RBP24.21■■□□□ 1.47
TARBP1-201ENST00000040877 CASS4Q9NQ75 786 aa24.21■■□□□ 1.47
TARBP1-201ENST00000040877 CXCL11O14625 94 aa24.21■■□□□ 1.47
TARBP1-201ENST00000040877 PON1P27169 355 aa24.21■■□□□ 1.47
TARBP1-201ENST00000040877 KCNA1Q09470 495 aa24.21■■□□□ 1.47
TARBP1-201ENST00000040877 SYTL3Q4VX76 610 aa24.21■■□□□ 1.47
TARBP1-201ENST00000040877 LRRC23Q53EV4 343 aaPredicted RBP24.21■■□□□ 1.47
TARBP1-201ENST00000040877 HMOX2P30519 316 aa24.21■■□□□ 1.47
TARBP1-201ENST00000040877 PPIL6Q8IXY8 311 aa24.21■■□□□ 1.47
TARBP1-201ENST00000040877 ISCUQ9H1K1 167 aa24.21■■□□□ 1.47
TARBP1-201ENST00000040877 EPC1Q9H2F5 836 aa24.21■■□□□ 1.47
TARBP1-201ENST00000040877 SYNPO2Q9UMS6 1093 aa24.21■■□□□ 1.47
TARBP1-201ENST00000040877 GZMAP12544 262 aa24.2■■□□□ 1.47
TARBP1-201ENST00000040877 TCRBV5S4A2TA0A5A2 114 aa24.2■■□□□ 1.46
TARBP1-201ENST00000040877 MDH1P40925 334 aaKnown RBP24.2■■□□□ 1.46
TARBP1-201ENST00000040877 RGS4P49798 205 aa24.2■■□□□ 1.46
TARBP1-201ENST00000040877 CCDC15Q0P6D6 951 aa24.2■■□□□ 1.46
TARBP1-201ENST00000040877 SYTL5Q8TDW5 730 aaPredicted RBP24.2■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms