RNA–Protein interactions for RNA: ENSMUST00000113706.9

Trim39-203, Transcript of E3 ubiquitin-protein ligase TRIM39, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim39, Length 3,204 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39-203ENSMUST00000113706 PrcpQ7TMR0 491 aa16.81■□□□□ 0.28
Trim39-203ENSMUST00000113706 Znf784Q8BI69 297 aa16.81■□□□□ 0.28
Trim39-203ENSMUST00000113706 Rdh14Q9ERI6 334 aa16.81■□□□□ 0.28
Trim39-203ENSMUST00000113706 Hsd17b14E9Q3D4 273 aa16.8■□□□□ 0.28
Trim39-203ENSMUST00000113706 Trim21Q62191 470 aa16.8■□□□□ 0.28
Trim39-203ENSMUST00000113706 Ccdc25Q78PG9 208 aa16.8■□□□□ 0.28
Trim39-203ENSMUST00000113706 Spata20Q80YT5 790 aa16.8■□□□□ 0.28
Trim39-203ENSMUST00000113706 Rnf187Q8BFX1 236 aa16.8■□□□□ 0.28
Trim39-203ENSMUST00000113706 Q8BWG4 1187 aa16.8■□□□□ 0.28
Trim39-203ENSMUST00000113706 Aipl1Q924K1 328 aa16.8■□□□□ 0.28
Trim39-203ENSMUST00000113706 Zmat2Q9CPW7 199 aa16.8■□□□□ 0.28
Trim39-203ENSMUST00000113706 Cul2Q9D4H8 745 aa16.8■□□□□ 0.28
Trim39-203ENSMUST00000113706 Rnf138rt1Q9D9M9 248 aa16.8■□□□□ 0.28
Trim39-203ENSMUST00000113706 Scyl3Q9DBQ7 735 aa16.8■□□□□ 0.28
Trim39-203ENSMUST00000113706 Tnfrsf10bQ9QZM4 381 aa16.8■□□□□ 0.28
Trim39-203ENSMUST00000113706 Abcb5B5X0E4 1255 aa16.8■□□□□ 0.28
Trim39-203ENSMUST00000113706 Snx25Q3ZT31 840 aa16.8■□□□□ 0.28
Trim39-203ENSMUST00000113706 Adad1Q5SUE7 619 aa16.8■□□□□ 0.28
Trim39-203ENSMUST00000113706 Olfr670Q7TRP3 312 aa16.8■□□□□ 0.28
Trim39-203ENSMUST00000113706 Mageb18Q8BQR7 327 aa16.8■□□□□ 0.28
Trim39-203ENSMUST00000113706 Vmn1r64Q8R2B8 320 aa16.8■□□□□ 0.28
Trim39-203ENSMUST00000113706 Krt17Q9QWL7 433 aa16.8■□□□□ 0.28
Trim39-203ENSMUST00000113706 ThadaA8C756 1938 aa16.8■□□□□ 0.28
Trim39-203ENSMUST00000113706 Bpifb9bA2AJD1 591 aa16.79■□□□□ 0.28
Trim39-203ENSMUST00000113706 Gm42641I6L9G2 585 aa16.79■□□□□ 0.28
Trim39-203ENSMUST00000113706 Pdk4O70571 412 aa16.79■□□□□ 0.28
Trim39-203ENSMUST00000113706 Fscn1Q61553 493 aa16.79■□□□□ 0.28
Trim39-203ENSMUST00000113706 Bpifb9aQ80XI7 591 aa16.79■□□□□ 0.28
Trim39-203ENSMUST00000113706 AtripQ8BMG1 785 aa16.79■□□□□ 0.28
Trim39-203ENSMUST00000113706 Caskin2Q8VHK1 1201 aa16.79■□□□□ 0.28
Trim39-203ENSMUST00000113706 Drg2Q9QXB9 364 aaKnown RBP16.79■□□□□ 0.28
Trim39-203ENSMUST00000113706 Zscan4-ps1A0A1C7CYV3 506 aa16.79■□□□□ 0.28
Trim39-203ENSMUST00000113706 Zscan4dA7KBS4 506 aa16.79■□□□□ 0.28
Trim39-203ENSMUST00000113706 Xrcc6P23475 608 aa16.79■□□□□ 0.28
Trim39-203ENSMUST00000113706 Ephb4P54761 987 aa16.79■□□□□ 0.28
Trim39-203ENSMUST00000113706 Zscan4fQ3URS2 506 aa16.79■□□□□ 0.28
Trim39-203ENSMUST00000113706 Zfp957Q3UT76 567 aa16.79■□□□□ 0.28
Trim39-203ENSMUST00000113706 Atg9bQ6EBV9 922 aa16.79■□□□□ 0.28
Trim39-203ENSMUST00000113706 Ntrk3Q6VNS1 825 aa16.79■□□□□ 0.28
Trim39-203ENSMUST00000113706 Zscan4cQ80VJ6 506 aa16.79■□□□□ 0.28
Trim39-203ENSMUST00000113706 Camta2Q80Y50 1208 aa16.79■□□□□ 0.28
Trim39-203ENSMUST00000113706 Fsd1lQ8BYN5 507 aa16.79■□□□□ 0.28
Trim39-203ENSMUST00000113706 Gpc5Q8CAL5 572 aa16.79■□□□□ 0.28
Trim39-203ENSMUST00000113706 Ddx56Q9D0R4 546 aaKnown RBP16.79■□□□□ 0.28
Trim39-203ENSMUST00000113706 Cpb2Q9JHH6 422 aa16.79■□□□□ 0.28
Trim39-203ENSMUST00000113706 Fam171a1A2ATK9 892 aa16.79■□□□□ 0.28
Trim39-203ENSMUST00000113706 Ptpn11P35235 597 aa16.79■□□□□ 0.28
Trim39-203ENSMUST00000113706 Foxp2P58463 714 aa16.79■□□□□ 0.28
Trim39-203ENSMUST00000113706 Smarcad1Q04692 1021 aa16.79■□□□□ 0.28
Trim39-203ENSMUST00000113706 Sox13Q04891 613 aa16.79■□□□□ 0.28
Trim39-203ENSMUST00000113706 Pi4kbQ8BKC8 816 aa16.79■□□□□ 0.28
Trim39-203ENSMUST00000113706 Q8CD60 292 aa16.79■□□□□ 0.28
Trim39-203ENSMUST00000113706 CmasQ99KK2 432 aaKnown RBP16.79■□□□□ 0.28
Trim39-203ENSMUST00000113706 Ppp2r3dQ9Z176 491 aa16.79■□□□□ 0.28
Trim39-203ENSMUST00000113706 Ncf2O70145 525 aa16.78■□□□□ 0.28
Trim39-203ENSMUST00000113706 Gnl1P36916 607 aa16.78■□□□□ 0.28
Trim39-203ENSMUST00000113706 Frg1P97376 258 aaKnown RBP16.78■□□□□ 0.28
Trim39-203ENSMUST00000113706 Tcf4Q60722 670 aa16.78■□□□□ 0.28
Trim39-203ENSMUST00000113706 Snx17Q8BVL3 470 aa16.78■□□□□ 0.28
Trim39-203ENSMUST00000113706 Msantd4Q91YU3 345 aa16.78■□□□□ 0.28
Trim39-203ENSMUST00000113706 Ccdc83Q9D4V3 305 aa16.78■□□□□ 0.28
Trim39-203ENSMUST00000113706 DpysQ9EQF5 519 aa16.78■□□□□ 0.28
Trim39-203ENSMUST00000113706 Ggt5Q9Z2A9 573 aa16.78■□□□□ 0.28
Trim39-203ENSMUST00000113706 Plxnb3Q9QY40 1902 aa16.78■□□□□ 0.28
Trim39-203ENSMUST00000113706 Gm10721J3QPJ9 223 aa16.78■□□□□ 0.28
Trim39-203ENSMUST00000113706 Tbxas1P36423 533 aa16.78■□□□□ 0.28
Trim39-203ENSMUST00000113706 PuraP42669 321 aaKnown RBP16.78■□□□□ 0.28
Trim39-203ENSMUST00000113706 Acvrl1Q61288 502 aa16.78■□□□□ 0.28
Trim39-203ENSMUST00000113706 Mill1Q8HWE7 395 aa16.78■□□□□ 0.28
Trim39-203ENSMUST00000113706 Fbxo33Q8VE08 562 aa16.78■□□□□ 0.28
Trim39-203ENSMUST00000113706 Spns2Q91VM4 549 aa16.78■□□□□ 0.28
Trim39-203ENSMUST00000113706 Eif3hQ91WK2 352 aaKnown RBP16.78■□□□□ 0.28
Trim39-203ENSMUST00000113706 Tubgcp4Q9D4F8 667 aa16.78■□□□□ 0.28
Trim39-203ENSMUST00000113706 CtsfQ9R013 462 aa16.78■□□□□ 0.28
Trim39-203ENSMUST00000113706 Cntnap5aQ0V8T9 1304 aa16.78■□□□□ 0.28
Trim39-203ENSMUST00000113706 Mocs3A2BDX3 460 aaKnown RBP16.77■□□□□ 0.28
Trim39-203ENSMUST00000113706 IvlP48997 467 aa16.77■□□□□ 0.28
Trim39-203ENSMUST00000113706 Cyp2j11Q3UNV2 504 aa16.77■□□□□ 0.28
Trim39-203ENSMUST00000113706 Q5XFZ0 217 aa16.77■□□□□ 0.28
Trim39-203ENSMUST00000113706 Tmem260Q8BMD6 703 aa16.77■□□□□ 0.28
Trim39-203ENSMUST00000113706 Tmem132cQ8CEF9 1099 aa16.77■□□□□ 0.28
Trim39-203ENSMUST00000113706 Ptchd4B9EKX1 904 aa16.77■□□□□ 0.28
Trim39-203ENSMUST00000113706 Rasal2E9PW37 1286 aa16.77■□□□□ 0.28
Trim39-203ENSMUST00000113706 Lhx5P61375 402 aa16.77■□□□□ 0.28
Trim39-203ENSMUST00000113706 Cntnap5bQ0V8T8 1292 aa16.77■□□□□ 0.28
Trim39-203ENSMUST00000113706 Ccdc92bQ5SUE3 299 aa16.77■□□□□ 0.28
Trim39-203ENSMUST00000113706 Zcwpw1Q6IR42 630 aa16.77■□□□□ 0.28
Trim39-203ENSMUST00000113706 Retreg2Q6NS82 541 aa16.77■□□□□ 0.28
Trim39-203ENSMUST00000113706 Wscd1Q80XH4 572 aa16.77■□□□□ 0.28
Trim39-203ENSMUST00000113706 Themis2Q91YX0 663 aa16.77■□□□□ 0.28
Trim39-203ENSMUST00000113706 Slc12a6Q924N4 1150 aa16.77■□□□□ 0.28
Trim39-203ENSMUST00000113706 1700123K08RikQ9D991 295 aa16.77■□□□□ 0.28
Trim39-203ENSMUST00000113706 Ptgdr2Q9Z2J6 382 aa16.77■□□□□ 0.28
Trim39-203ENSMUST00000113706 Kiaa1522A2A7S8 1013 aa16.77■□□□□ 0.27
Trim39-203ENSMUST00000113706 Slc4a11A2AJN7 862 aa16.77■□□□□ 0.27
Trim39-203ENSMUST00000113706 Akr1b8P45377 316 aa16.77■□□□□ 0.27
Trim39-203ENSMUST00000113706 Q3UE31 404 aa16.77■□□□□ 0.27
Trim39-203ENSMUST00000113706 Ccdc117Q6PB51 277 aa16.77■□□□□ 0.27
Trim39-203ENSMUST00000113706 PoliQ6R3M4 717 aa16.77■□□□□ 0.27
Trim39-203ENSMUST00000113706 Pramel7Q810Y8 479 aa16.77■□□□□ 0.27
Retrieved 100 of 22,080 RNA–protein pairs in 34.2 ms