RNA–Protein interactions for RNA: ENSMUST00000111050.9

Bdnf-209, Transcript of Brain-derived neurotrophic factor, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Bdnf, Length 3,965 nt, Biotype protein coding, Subcellular localisation Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Bdnf-209ENSMUST00000111050 OatP29758 439 aa7.99□□□□□ -1.13
Bdnf-209ENSMUST00000111050 LmnaP48678 665 aaKnown RBP7.99□□□□□ -1.13
Bdnf-209ENSMUST00000111050 Faf1P54731 649 aa7.99□□□□□ -1.13
Bdnf-209ENSMUST00000111050 Snrpa1P57784 255 aaKnown RBP7.99□□□□□ -1.13
Bdnf-209ENSMUST00000111050 Wdhd1P59328 1117 aa7.99□□□□□ -1.13
Bdnf-209ENSMUST00000111050 Upf3bQ3ULL6 472 aa7.99□□□□□ -1.13
Bdnf-209ENSMUST00000111050 Fam91a1Q3UVG3 837 aa7.99□□□□□ -1.13
Bdnf-209ENSMUST00000111050 Olfm4Q3UZZ4 505 aa7.99□□□□□ -1.13
Bdnf-209ENSMUST00000111050 Eif2dQ61211 570 aaKnown RBP7.99□□□□□ -1.13
Bdnf-209ENSMUST00000111050 Hif1aQ61221 836 aaKnown RBP7.99□□□□□ -1.13
Bdnf-209ENSMUST00000111050 Arhgap10Q6Y5D8 786 aa7.99□□□□□ -1.13
Bdnf-209ENSMUST00000111050 Kirrel2Q7TSU7 700 aa7.99□□□□□ -1.13
Bdnf-209ENSMUST00000111050 Impg2Q80XH2 1243 aa7.99□□□□□ -1.13
Bdnf-209ENSMUST00000111050 Tbx10Q810F8 385 aa7.99□□□□□ -1.13
Bdnf-209ENSMUST00000111050 Q8BGA7 448 aa7.99□□□□□ -1.13
Bdnf-209ENSMUST00000111050 NcaphQ8C156 731 aa7.99□□□□□ -1.13
Bdnf-209ENSMUST00000111050 SucoQ8C341 1250 aa7.99□□□□□ -1.13
Bdnf-209ENSMUST00000111050 Wdr37Q8CBE3 496 aa7.99□□□□□ -1.13
Bdnf-209ENSMUST00000111050 Ces1Q8VCC2 565 aa7.99□□□□□ -1.13
Bdnf-209ENSMUST00000111050 TbccQ8VCN9 341 aa7.99□□□□□ -1.13
Bdnf-209ENSMUST00000111050 Catsper1Q91ZR5 686 aa7.99□□□□□ -1.13
Bdnf-209ENSMUST00000111050 Afg3l1Q920A7 789 aaKnown RBP7.99□□□□□ -1.13
Bdnf-209ENSMUST00000111050 CpvlQ9D3S9 478 aa7.99□□□□□ -1.13
Bdnf-209ENSMUST00000111050 Hic1Q9R1Y5 733 aa7.99□□□□□ -1.13
Bdnf-209ENSMUST00000111050 Mia3Q8BI84 1930 aa7.99□□□□□ -1.13
Bdnf-209ENSMUST00000111050 Zfp266E9Q2S7 604 aa7.99□□□□□ -1.13
Bdnf-209ENSMUST00000111050 MafgO54790 162 aa7.99□□□□□ -1.13
Bdnf-209ENSMUST00000111050 Enpp1P06802 906 aa7.99□□□□□ -1.13
Bdnf-209ENSMUST00000111050 Ncam1P13595 1115 aa7.99□□□□□ -1.13
Bdnf-209ENSMUST00000111050 Gria2P23819 883 aa7.99□□□□□ -1.13
Bdnf-209ENSMUST00000111050 ErfP70459 551 aa7.99□□□□□ -1.13
Bdnf-209ENSMUST00000111050 Glt6d1Q2NKH9 311 aa7.99□□□□□ -1.13
Bdnf-209ENSMUST00000111050 Smg7Q5RJH6 1138 aaKnown RBP7.99□□□□□ -1.13
Bdnf-209ENSMUST00000111050 RgmbQ7TQ33 436 aa7.99□□□□□ -1.13
Bdnf-209ENSMUST00000111050 Olfr297Q7TS07 310 aa7.99□□□□□ -1.13
Bdnf-209ENSMUST00000111050 Lrrc27Q80YS5 523 aa7.99□□□□□ -1.13
Bdnf-209ENSMUST00000111050 Kat5Q8CHK4 513 aa7.99□□□□□ -1.13
Bdnf-209ENSMUST00000111050 Clip4Q8CI96 704 aa7.99□□□□□ -1.13
Bdnf-209ENSMUST00000111050 Nup85Q8R480 656 aaKnown RBP7.99□□□□□ -1.13
Bdnf-209ENSMUST00000111050 Ak5Q920P5 562 aa7.99□□□□□ -1.13
Bdnf-209ENSMUST00000111050 Rin1Q921Q7 763 aa7.99□□□□□ -1.13
Bdnf-209ENSMUST00000111050 Gps1Q99LD4 471 aaKnown RBP7.99□□□□□ -1.13
Bdnf-209ENSMUST00000111050 Tmed10Q9D1D4 219 aaKnown RBP7.99□□□□□ -1.13
Bdnf-209ENSMUST00000111050 Apbb2Q9DBR4 760 aa7.99□□□□□ -1.13
Bdnf-209ENSMUST00000111050 Irs4Q9Z0Y7 1216 aa7.99□□□□□ -1.13
Bdnf-209ENSMUST00000111050 Pdpk1Q9Z2A0 559 aa7.99□□□□□ -1.13
Bdnf-209ENSMUST00000111050 Lamb1P02469 1786 aa7.99□□□□□ -1.13
Bdnf-209ENSMUST00000111050 Pgk2P09041 417 aa7.98□□□□□ -1.13
Bdnf-209ENSMUST00000111050 Ephx2P34914 554 aa7.98□□□□□ -1.13
Bdnf-209ENSMUST00000111050 Eci1P42125 289 aaKnown RBP7.98□□□□□ -1.13
Bdnf-209ENSMUST00000111050 Gata5P97489 404 aa7.98□□□□□ -1.13
Bdnf-209ENSMUST00000111050 Arid5aQ3U108 590 aa7.98□□□□□ -1.13
Bdnf-209ENSMUST00000111050 Slc26a2Q62273 739 aa7.98□□□□□ -1.13
Bdnf-209ENSMUST00000111050 Senp6Q6P7W0 1132 aa7.98□□□□□ -1.13
Bdnf-209ENSMUST00000111050 Olfr814Q7TRH4 310 aa7.98□□□□□ -1.13
Bdnf-209ENSMUST00000111050 Pdzph1Q8BGR1 1238 aa7.98□□□□□ -1.13
Bdnf-209ENSMUST00000111050 Smarcal1Q8BJL0 910 aa7.98□□□□□ -1.13
Bdnf-209ENSMUST00000111050 Nlrp4bQ8C6J9 863 aa7.98□□□□□ -1.13
Bdnf-209ENSMUST00000111050 Pgm2l1Q8CAA7 621 aa7.98□□□□□ -1.13
Bdnf-209ENSMUST00000111050 OgtQ8CGY8 1046 aa7.98□□□□□ -1.13
Bdnf-209ENSMUST00000111050 Ago3Q8CJF9 860 aa7.98□□□□□ -1.13
Bdnf-209ENSMUST00000111050 Acvr1cQ8K348 493 aa7.98□□□□□ -1.13
Bdnf-209ENSMUST00000111050 Sh3kbp1Q8R550 709 aaKnown RBP7.98□□□□□ -1.13
Bdnf-209ENSMUST00000111050 Bcs1lQ9CZP5 418 aa7.98□□□□□ -1.13
Bdnf-209ENSMUST00000111050 Hey2Q9QUS4 339 aa7.98□□□□□ -1.13
Bdnf-209ENSMUST00000111050 Zscan4-ps1A0A1C7CYV3 506 aa7.98□□□□□ -1.13
Bdnf-209ENSMUST00000111050 Zscan4dA7KBS4 506 aa7.98□□□□□ -1.13
Bdnf-209ENSMUST00000111050 Tuft1O08970 390 aa7.98□□□□□ -1.13
Bdnf-209ENSMUST00000111050 Srpk1O70551 648 aaKnown RBP7.98□□□□□ -1.13
Bdnf-209ENSMUST00000111050 Sstr1P30873 391 aa7.98□□□□□ -1.13
Bdnf-209ENSMUST00000111050 Slc1a1P51906 523 aa7.98□□□□□ -1.13
Bdnf-209ENSMUST00000111050 RalaP63321 206 aa7.98□□□□□ -1.13
Bdnf-209ENSMUST00000111050 OtulinQ3UCV8 352 aa7.98□□□□□ -1.13
Bdnf-209ENSMUST00000111050 Zscan4fQ3URS2 506 aa7.98□□□□□ -1.13
Bdnf-209ENSMUST00000111050 Gata6Q61169 589 aa7.98□□□□□ -1.13
Bdnf-209ENSMUST00000111050 Lpcat4Q6NVG1 524 aa7.98□□□□□ -1.13
Bdnf-209ENSMUST00000111050 Cyfip1Q7TMB8 1253 aa7.98□□□□□ -1.13
Bdnf-209ENSMUST00000111050 Trpm4Q7TN37 1213 aa7.98□□□□□ -1.13
Bdnf-209ENSMUST00000111050 Zscan4cQ80VJ6 506 aa7.98□□□□□ -1.13
Bdnf-209ENSMUST00000111050 Znf451Q8C0P7 1056 aa7.98□□□□□ -1.13
Bdnf-209ENSMUST00000111050 Irak3Q8K4B2 609 aa7.98□□□□□ -1.13
Bdnf-209ENSMUST00000111050 Nuf2Q99P69 463 aa7.98□□□□□ -1.13
Bdnf-209ENSMUST00000111050 TbcbQ9D1E6 244 aa7.98□□□□□ -1.13
Bdnf-209ENSMUST00000111050 Wdr83Q9DAJ4 315 aaKnown RBP7.98□□□□□ -1.13
Bdnf-209ENSMUST00000111050 CtsrQ9JIA9 334 aa7.98□□□□□ -1.13
Bdnf-209ENSMUST00000111050 Hebp1Q9R257 190 aa7.98□□□□□ -1.13
Bdnf-209ENSMUST00000111050 Foxo4Q9WVH3 505 aa7.98□□□□□ -1.13
Bdnf-209ENSMUST00000111050 MtrA6H5Y3 1253 aa7.98□□□□□ -1.13
Bdnf-209ENSMUST00000111050 Izumo3A6PWV3 263 aa7.98□□□□□ -1.13
Bdnf-209ENSMUST00000111050 Mroh5E9PUJ8 762 aa7.98□□□□□ -1.13
Bdnf-209ENSMUST00000111050 Olfr220E9Q050 325 aa7.98□□□□□ -1.13
Bdnf-209ENSMUST00000111050 Gm1661E9Q963 441 aa7.98□□□□□ -1.13
Bdnf-209ENSMUST00000111050 KlO35082 1014 aa7.98□□□□□ -1.13
Bdnf-209ENSMUST00000111050 Serpini1O35684 410 aa7.98□□□□□ -1.13
Bdnf-209ENSMUST00000111050 ZfrO88532 1074 aaKnown RBP7.98□□□□□ -1.13
Bdnf-209ENSMUST00000111050 Mcpt4P21812 246 aa7.98□□□□□ -1.13
Bdnf-209ENSMUST00000111050 GabrdP22933 449 aa7.98□□□□□ -1.13
Bdnf-209ENSMUST00000111050 Fam83bQ0VBM2 1012 aa7.98□□□□□ -1.13
Bdnf-209ENSMUST00000111050 Trim21Q62191 470 aa7.98□□□□□ -1.13
Bdnf-209ENSMUST00000111050 Vmn2r26Q6TAC4 855 aa7.98□□□□□ -1.13
Retrieved 100 of 22,080 RNA–protein pairs in 22.3 ms