RNA–Protein interactions for RNA: ENSMUST00000080461.11

Lig3-202, Transcript of DNA ligase 3, mousemouse

TSL 5 BASIC

Gene Lig3, Length 3,056 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Lig3-202ENSMUST00000080461 Snx25Q3ZT31 840 aa13.14□□□□□ -0.31
Lig3-202ENSMUST00000080461 Ugt1a1Q63886 535 aa13.14□□□□□ -0.31
Lig3-202ENSMUST00000080461 Armcx2Q6A058 784 aaKnown RBP13.14□□□□□ -0.31
Lig3-202ENSMUST00000080461 Lsm8Q6ZWM4 96 aaKnown RBP13.14□□□□□ -0.31
Lig3-202ENSMUST00000080461 Rftn2Q8CHX7 500 aa13.14□□□□□ -0.31
Lig3-202ENSMUST00000080461 Ccdc137Q8R0K4 290 aaKnown RBP13.14□□□□□ -0.31
Lig3-202ENSMUST00000080461 YarsQ91WQ3 528 aaKnown RBP13.14□□□□□ -0.31
Lig3-202ENSMUST00000080461 ArpinQ9D0A3 226 aa13.14□□□□□ -0.31
Lig3-202ENSMUST00000080461 Chordc1Q9D1P4 331 aaKnown RBP13.14□□□□□ -0.31
Lig3-202ENSMUST00000080461 Prpf4Q9DAW6 521 aaKnown RBP13.14□□□□□ -0.31
Lig3-202ENSMUST00000080461 Cfap221A9Q751 836 aa13.14□□□□□ -0.31
Lig3-202ENSMUST00000080461 Acp4D3YTS9 425 aa13.14□□□□□ -0.31
Lig3-202ENSMUST00000080461 Il27raO70394 623 aa13.14□□□□□ -0.31
Lig3-202ENSMUST00000080461 PkmP52480 531 aaKnown RBP13.14□□□□□ -0.31
Lig3-202ENSMUST00000080461 Pi4k2aQ2TBE6 479 aa13.14□□□□□ -0.31
Lig3-202ENSMUST00000080461 Fez2Q6TYB5 348 aa13.14□□□□□ -0.31
Lig3-202ENSMUST00000080461 Sdad1Q80UZ2 687 aaKnown RBP13.14□□□□□ -0.31
Lig3-202ENSMUST00000080461 Spata20Q80YT5 790 aa13.14□□□□□ -0.31
Lig3-202ENSMUST00000080461 1700123K08RikQ9D991 295 aa13.14□□□□□ -0.31
Lig3-202ENSMUST00000080461 Upf1Q9EPU0 1124 aaKnown RBP13.14□□□□□ -0.31
Lig3-202ENSMUST00000080461 Trpm5Q9JJH7 1158 aa13.14□□□□□ -0.31
Lig3-202ENSMUST00000080461 Sfmbt1Q9JMD1 863 aa13.14□□□□□ -0.31
Lig3-202ENSMUST00000080461 Krt17Q9QWL7 433 aa13.14□□□□□ -0.31
Lig3-202ENSMUST00000080461 EcsitQ9QZH6 435 aa13.14□□□□□ -0.31
Lig3-202ENSMUST00000080461 Gm42715A0A087WP63 3095 aaKnown RBP13.13□□□□□ -0.31
Lig3-202ENSMUST00000080461 Lrrc63A6H694 637 aa13.13□□□□□ -0.31
Lig3-202ENSMUST00000080461 Birc5O70201 140 aa13.13□□□□□ -0.31
Lig3-202ENSMUST00000080461 Slc12a1P55014 1095 aa13.13□□□□□ -0.31
Lig3-202ENSMUST00000080461 Adamts19P59509 1210 aa13.13□□□□□ -0.31
Lig3-202ENSMUST00000080461 Fnbp1Q80TY0 616 aa13.13□□□□□ -0.31
Lig3-202ENSMUST00000080461 Tmem260Q8BMD6 703 aa13.13□□□□□ -0.31
Lig3-202ENSMUST00000080461 HhatQ8BMT9 499 aa13.13□□□□□ -0.31
Lig3-202ENSMUST00000080461 SfpqQ8VIJ6 699 aaKnown RBP13.13□□□□□ -0.31
Lig3-202ENSMUST00000080461 Fkbp1bQ9Z2I2 108 aa13.13□□□□□ -0.31
Lig3-202ENSMUST00000080461 Slc4a11A2AJN7 862 aa13.13□□□□□ -0.31
Lig3-202ENSMUST00000080461 Apol7bB1AQP7 369 aa13.13□□□□□ -0.31
Lig3-202ENSMUST00000080461 Hsd17b14E9Q3D4 273 aa13.13□□□□□ -0.31
Lig3-202ENSMUST00000080461 2010300C02RikE9Q3M9 1175 aa13.13□□□□□ -0.31
Lig3-202ENSMUST00000080461 Dpysl4O35098 572 aa13.13□□□□□ -0.31
Lig3-202ENSMUST00000080461 Gap43P06837 227 aa13.13□□□□□ -0.31
Lig3-202ENSMUST00000080461 Usp10P52479 792 aaKnown RBP13.13□□□□□ -0.31
Lig3-202ENSMUST00000080461 Atp8a1P70704 1164 aa13.13□□□□□ -0.31
Lig3-202ENSMUST00000080461 Atp8b1Q148W0 1251 aa13.13□□□□□ -0.31
Lig3-202ENSMUST00000080461 Apol7eQ3UZ24 369 aa13.13□□□□□ -0.31
Lig3-202ENSMUST00000080461 Atg9bQ6EBV9 922 aa13.13□□□□□ -0.31
Lig3-202ENSMUST00000080461 Ttyh3Q6P5F7 524 aa13.13□□□□□ -0.31
Lig3-202ENSMUST00000080461 PoliQ6R3M4 717 aa13.13□□□□□ -0.31
Lig3-202ENSMUST00000080461 Zfyve28Q6ZPK7 905 aa13.13□□□□□ -0.31
Lig3-202ENSMUST00000080461 PrcpQ7TMR0 491 aa13.13□□□□□ -0.31
Lig3-202ENSMUST00000080461 PhkbQ7TSH2 1085 aa13.13□□□□□ -0.31
Lig3-202ENSMUST00000080461 Mageb18Q8BQR7 327 aa13.13□□□□□ -0.31
Lig3-202ENSMUST00000080461 Syt15Q8C6N3 418 aa13.13□□□□□ -0.31
Lig3-202ENSMUST00000080461 Adgrg2Q8CJ12 1009 aa13.13□□□□□ -0.31
Lig3-202ENSMUST00000080461 Tmem86aQ9D8N3 241 aa13.13□□□□□ -0.31
Lig3-202ENSMUST00000080461 Arih2Q9Z1K6 492 aa13.13□□□□□ -0.31
Lig3-202ENSMUST00000080461 Gm10721J3QPJ9 223 aa13.12□□□□□ -0.31
Lig3-202ENSMUST00000080461 PtgisO35074 501 aa13.12□□□□□ -0.31
Lig3-202ENSMUST00000080461 Folh1O35409 752 aa13.12□□□□□ -0.31
Lig3-202ENSMUST00000080461 Plk1Q07832 603 aa13.12□□□□□ -0.31
Lig3-202ENSMUST00000080461 IqceQ6PCQ0 778 aa13.12□□□□□ -0.31
Lig3-202ENSMUST00000080461 Mrgprb8Q7TN51 330 aa13.12□□□□□ -0.31
Lig3-202ENSMUST00000080461 Wscd1Q80XH4 572 aa13.12□□□□□ -0.31
Lig3-202ENSMUST00000080461 Wdtc1Q80ZK9 677 aa13.12□□□□□ -0.31
Lig3-202ENSMUST00000080461 Creb3l2Q8BH52 521 aa13.12□□□□□ -0.31
Lig3-202ENSMUST00000080461 Rufy1Q8BIJ7 712 aa13.12□□□□□ -0.31
Lig3-202ENSMUST00000080461 Cfap36Q8C6E0 343 aa13.12□□□□□ -0.31
Lig3-202ENSMUST00000080461 Pqbp1Q91VJ5 263 aaKnown RBP13.12□□□□□ -0.31
Lig3-202ENSMUST00000080461 Scyl3Q9DBQ7 735 aa13.12□□□□□ -0.31
Lig3-202ENSMUST00000080461 Edf1Q9JMG1 148 aaKnown RBP13.12□□□□□ -0.31
Lig3-202ENSMUST00000080461 Cntnap5aQ0V8T9 1304 aa13.12□□□□□ -0.31
Lig3-202ENSMUST00000080461 Myo16Q5DU14 1919 aa13.12□□□□□ -0.31
Lig3-202ENSMUST00000080461 Zfp882E9Q4R4 555 aa13.12□□□□□ -0.31
Lig3-202ENSMUST00000080461 R3hdm1E9Q9Q2 1135 aaKnown RBP13.12□□□□□ -0.31
Lig3-202ENSMUST00000080461 Gjb3P28231 270 aa13.12□□□□□ -0.31
Lig3-202ENSMUST00000080461 Hoxd10P28359 340 aa13.12□□□□□ -0.31
Lig3-202ENSMUST00000080461 Spout1Q3UHX9 385 aaKnown RBP13.12□□□□□ -0.31
Lig3-202ENSMUST00000080461 Lrch2Q3UMG5 773 aa13.12□□□□□ -0.31
Lig3-202ENSMUST00000080461 Ccdc85aQ5SP85 500 aa13.12□□□□□ -0.31
Lig3-202ENSMUST00000080461 Zbed4Q80WQ9 1168 aa13.12□□□□□ -0.31
Lig3-202ENSMUST00000080461 Rnf187Q8BFX1 236 aa13.12□□□□□ -0.31
Lig3-202ENSMUST00000080461 Vipas39Q8BGQ1 491 aa13.12□□□□□ -0.31
Lig3-202ENSMUST00000080461 Fbxo38Q8BMI0 1194 aa13.12□□□□□ -0.31
Lig3-202ENSMUST00000080461 Olfr1494Q8VGP8 315 aa13.12□□□□□ -0.31
Lig3-202ENSMUST00000080461 Ankrd54Q91WK7 299 aa13.12□□□□□ -0.31
Lig3-202ENSMUST00000080461 Asah2Q9JHE3 756 aa13.12□□□□□ -0.31
Lig3-202ENSMUST00000080461 Maged1Q9QYH6 775 aaKnown RBP13.12□□□□□ -0.31
Lig3-202ENSMUST00000080461 Wnt8bQ9WUD6 350 aa13.12□□□□□ -0.31
Lig3-202ENSMUST00000080461 Adamts9E9PUN6 1931 aa13.12□□□□□ -0.31
Lig3-202ENSMUST00000080461 Igkv10-96A0A140T8M1 115 aa13.11□□□□□ -0.31
Lig3-202ENSMUST00000080461 Mup10A2BIN1 180 aa13.11□□□□□ -0.31
Lig3-202ENSMUST00000080461 Mup14A2CEK7 180 aa13.11□□□□□ -0.31
Lig3-202ENSMUST00000080461 Mup19A9C497 187 aa13.11□□□□□ -0.31
Lig3-202ENSMUST00000080461 Mup15A9R9W0 180 aa13.11□□□□□ -0.31
Lig3-202ENSMUST00000080461 Mup17B5X0G2 180 aa13.11□□□□□ -0.31
Lig3-202ENSMUST00000080461 Mup8E9PVW0 235 aa13.11□□□□□ -0.31
Lig3-202ENSMUST00000080461 Mup7E9QA79 235 aa13.11□□□□□ -0.31
Lig3-202ENSMUST00000080461 Gm3415J3QMS8 315 aa13.11□□□□□ -0.31
Lig3-202ENSMUST00000080461 Mup6P02762 180 aa13.11□□□□□ -0.31
Lig3-202ENSMUST00000080461 Mup1P11588 180 aa13.11□□□□□ -0.31
Lig3-202ENSMUST00000080461 Mup2P11589 180 aa13.11□□□□□ -0.31
Retrieved 100 of 22,080 RNA–protein pairs in 76 ms