RNA–Protein interactions for RNA: ENSMUST00000038514.14

Nup54-201, Transcript of Nuclear pore complex protein Nup54, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Nup54, Length 2,352 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup54-201ENSMUST00000038514 Anxa8O35640 327 aa15.79■□□□□ 0.12
Nup54-201ENSMUST00000038514 TxkP42682 527 aa15.79■□□□□ 0.12
Nup54-201ENSMUST00000038514 Hcls1P49710 486 aaKnown RBP15.79■□□□□ 0.12
Nup54-201ENSMUST00000038514 Ccng1P51945 294 aa15.79■□□□□ 0.12
Nup54-201ENSMUST00000038514 Srebf2Q3U1N2 1130 aa15.79■□□□□ 0.12
Nup54-201ENSMUST00000038514 Lipo3Q3UT41 399 aa15.79■□□□□ 0.12
Nup54-201ENSMUST00000038514 Slc9b2Q5BKR2 547 aa15.79■□□□□ 0.12
Nup54-201ENSMUST00000038514 Cyb5d1Q5NCY3 228 aa15.79■□□□□ 0.12
Nup54-201ENSMUST00000038514 Luc7l3Q5SUF2 432 aaKnown RBP15.79■□□□□ 0.12
Nup54-201ENSMUST00000038514 XiapQ60989 496 aa15.79■□□□□ 0.12
Nup54-201ENSMUST00000038514 Glra2Q7TNC8 452 aa15.79■□□□□ 0.12
Nup54-201ENSMUST00000038514 Q80ZQ3 298 aa15.79■□□□□ 0.12
Nup54-201ENSMUST00000038514 Znf276Q8CE64 614 aa15.79■□□□□ 0.12
Nup54-201ENSMUST00000038514 Ago2Q8CJG0 860 aaKnown RBP15.79■□□□□ 0.12
Nup54-201ENSMUST00000038514 Stard7Q8R1R3 373 aa15.79■□□□□ 0.12
Nup54-201ENSMUST00000038514 Angel1Q8VCU0 667 aa15.79■□□□□ 0.12
Nup54-201ENSMUST00000038514 Setd3Q91WC0 594 aa15.79■□□□□ 0.12
Nup54-201ENSMUST00000038514 Pcdha3Q91Y16 942 aa15.79■□□□□ 0.12
Nup54-201ENSMUST00000038514 Tnpo2Q99LG2 887 aaKnown RBP15.79■□□□□ 0.12
Nup54-201ENSMUST00000038514 Slc12a4Q9JIS8 1085 aa15.79■□□□□ 0.12
Nup54-201ENSMUST00000038514 Plcg1Q62077 1302 aa15.79■□□□□ 0.12
Nup54-201ENSMUST00000038514 Pgap3A2A559 320 aa15.78■□□□□ 0.12
Nup54-201ENSMUST00000038514 Rab20P35295 233 aa15.78■□□□□ 0.12
Nup54-201ENSMUST00000038514 Casp7P97864 303 aa15.78■□□□□ 0.12
Nup54-201ENSMUST00000038514 Dab2P98078 766 aa15.78■□□□□ 0.12
Nup54-201ENSMUST00000038514 Atp11aP98197 1187 aa15.78■□□□□ 0.12
Nup54-201ENSMUST00000038514 Zbtb14Q08376 449 aa15.78■□□□□ 0.12
Nup54-201ENSMUST00000038514 Kcnc2Q14B80 642 aa15.78■□□□□ 0.12
Nup54-201ENSMUST00000038514 Wdr18Q4VBE8 431 aa15.78■□□□□ 0.12
Nup54-201ENSMUST00000038514 Tdpoz4Q6YCH2 370 aa15.78■□□□□ 0.12
Nup54-201ENSMUST00000038514 Tdpoz2Q717B2 364 aa15.78■□□□□ 0.12
Nup54-201ENSMUST00000038514 Acot11Q8VHQ9 594 aa15.78■□□□□ 0.12
Nup54-201ENSMUST00000038514 Sapcd2Q9D818 391 aa15.78■□□□□ 0.12
Nup54-201ENSMUST00000038514 Cst12Q9DAN8 128 aa15.78■□□□□ 0.12
Nup54-201ENSMUST00000038514 Rbp7Q9EPC5 134 aa15.78■□□□□ 0.12
Nup54-201ENSMUST00000038514 Tldc2A2ACG1 198 aa15.78■□□□□ 0.12
Nup54-201ENSMUST00000038514 MipepA6H611 711 aa15.78■□□□□ 0.12
Nup54-201ENSMUST00000038514 Eef1bO70251 225 aaKnown RBP15.78■□□□□ 0.12
Nup54-201ENSMUST00000038514 Ppargc1aO70343 797 aa15.78■□□□□ 0.12
Nup54-201ENSMUST00000038514 ZfxP17012 799 aa15.78■□□□□ 0.12
Nup54-201ENSMUST00000038514 Map4k1P70218 827 aa15.78■□□□□ 0.12
Nup54-201ENSMUST00000038514 Cdca2Q14B71 982 aaKnown RBP15.78■□□□□ 0.12
Nup54-201ENSMUST00000038514 GsapQ3TCV3 858 aa15.78■□□□□ 0.12
Nup54-201ENSMUST00000038514 Sema5bQ60519 1093 aa15.78■□□□□ 0.12
Nup54-201ENSMUST00000038514 YarsQ91WQ3 528 aaKnown RBP15.78■□□□□ 0.12
Nup54-201ENSMUST00000038514 Usp26Q99MX1 835 aa15.78■□□□□ 0.12
Nup54-201ENSMUST00000038514 Zfp623Q9CY99 499 aa15.78■□□□□ 0.12
Nup54-201ENSMUST00000038514 ParvaQ9EPC1 372 aa15.78■□□□□ 0.12
Nup54-201ENSMUST00000038514 DpysQ9EQF5 519 aa15.78■□□□□ 0.12
Nup54-201ENSMUST00000038514 Arih1Q9Z1K5 555 aa15.78■□□□□ 0.12
Nup54-201ENSMUST00000038514 Ripor3A1L3T7 938 aa15.77■□□□□ 0.12
Nup54-201ENSMUST00000038514 Grik3B1AS29 919 aa15.77■□□□□ 0.12
Nup54-201ENSMUST00000038514 Mmp13P33435 472 aa15.77■□□□□ 0.12
Nup54-201ENSMUST00000038514 Eepd1Q3TGW2 569 aa15.77■□□□□ 0.12
Nup54-201ENSMUST00000038514 Gsdmc4Q3TR54 480 aa15.77■□□□□ 0.12
Nup54-201ENSMUST00000038514 Tmem65Q4VAE3 234 aa15.77■□□□□ 0.12
Nup54-201ENSMUST00000038514 Dpysl3Q62188 570 aa15.77■□□□□ 0.12
Nup54-201ENSMUST00000038514 Spata24Q6P926 205 aa15.77■□□□□ 0.12
Nup54-201ENSMUST00000038514 Pwp2Q8BU03 919 aaKnown RBP15.77■□□□□ 0.12
Nup54-201ENSMUST00000038514 Slc39a13Q8BZH0 361 aa15.77■□□□□ 0.12
Nup54-201ENSMUST00000038514 Taf2Q8C176 1104 aa15.77■□□□□ 0.12
Nup54-201ENSMUST00000038514 Ino80bQ99PT3 375 aaKnown RBP15.77■□□□□ 0.12
Nup54-201ENSMUST00000038514 1700016D06RikQ9DAA5 166 aa15.77■□□□□ 0.12
Nup54-201ENSMUST00000038514 Igdcc4Q9EQS9 1252 aa15.77■□□□□ 0.12
Nup54-201ENSMUST00000038514 Trip11E9Q512 1976 aa15.77■□□□□ 0.12
Nup54-201ENSMUST00000038514 AspgA0JNU3 564 aa15.77■□□□□ 0.11
Nup54-201ENSMUST00000038514 Tubb1A2AQ07 451 aa15.77■□□□□ 0.11
Nup54-201ENSMUST00000038514 MycnP03966 462 aaKnown RBP15.77■□□□□ 0.11
Nup54-201ENSMUST00000038514 PrkceP16054 737 aa15.77■□□□□ 0.11
Nup54-201ENSMUST00000038514 Myl2P51667 166 aa15.77■□□□□ 0.11
Nup54-201ENSMUST00000038514 Psmc4P54775 418 aa15.77■□□□□ 0.11
Nup54-201ENSMUST00000038514 Znf112Q0VAW7 879 aa15.77■□□□□ 0.11
Nup54-201ENSMUST00000038514 AcrbpQ3V140 540 aa15.77■□□□□ 0.11
Nup54-201ENSMUST00000038514 HarsQ61035 509 aa15.77■□□□□ 0.11
Nup54-201ENSMUST00000038514 Mea1Q64327 174 aa15.77■□□□□ 0.11
Nup54-201ENSMUST00000038514 Sh3rf1Q69ZI1 892 aa15.77■□□□□ 0.11
Nup54-201ENSMUST00000038514 Ube2q2Q8K2Z8 378 aa15.77■□□□□ 0.11
Nup54-201ENSMUST00000038514 Trim60Q8VI40 466 aa15.77■□□□□ 0.11
Nup54-201ENSMUST00000038514 Rex1bdQ9CYZ6 169 aa15.77■□□□□ 0.11
Nup54-201ENSMUST00000038514 1700013H16RikQ9DAC5 291 aa15.77■□□□□ 0.11
Nup54-201ENSMUST00000038514 Dkc1Q9ESX5 509 aaKnown RBP15.77■□□□□ 0.11
Nup54-201ENSMUST00000038514 Sgk1Q9WVC6 431 aa15.77■□□□□ 0.11
Nup54-201ENSMUST00000038514 AgxtO35423 414 aa15.76■□□□□ 0.11
Nup54-201ENSMUST00000038514 Ifnar2O35664 513 aa15.76■□□□□ 0.11
Nup54-201ENSMUST00000038514 Sstr1P30873 391 aa15.76■□□□□ 0.11
Nup54-201ENSMUST00000038514 Smyd5Q3TYX3 416 aa15.76■□□□□ 0.11
Nup54-201ENSMUST00000038514 Mylk3Q3UIZ8 795 aa15.76■□□□□ 0.11
Nup54-201ENSMUST00000038514 Lgr6Q3UVD5 967 aa15.76■□□□□ 0.11
Nup54-201ENSMUST00000038514 Gm14685Q52KH6 695 aa15.76■□□□□ 0.11
Nup54-201ENSMUST00000038514 Grb10Q60760 621 aa15.76■□□□□ 0.11
Nup54-201ENSMUST00000038514 Sestd1Q80UK0 696 aa15.76■□□□□ 0.11
Nup54-201ENSMUST00000038514 Tcaf1Q8BNE1 924 aa15.76■□□□□ 0.11
Nup54-201ENSMUST00000038514 Gpc5Q8CAL5 572 aa15.76■□□□□ 0.11
Nup54-201ENSMUST00000038514 Plcb4Q91UZ1 1175 aa15.76■□□□□ 0.11
Nup54-201ENSMUST00000038514 Ptdss1Q99LH2 473 aaKnown RBP15.76■□□□□ 0.11
Nup54-201ENSMUST00000038514 Thap12Q9CUX1 758 aa15.76■□□□□ 0.11
Nup54-201ENSMUST00000038514 Slc26a3Q9WVC8 757 aa15.76■□□□□ 0.11
Nup54-201ENSMUST00000038514 Zscan4-ps1A0A1C7CYV3 506 aa15.76■□□□□ 0.11
Nup54-201ENSMUST00000038514 Zscan4dA7KBS4 506 aa15.76■□□□□ 0.11
Nup54-201ENSMUST00000038514 Ccdc6D3YZP9 469 aa15.76■□□□□ 0.11
Retrieved 100 of 22,080 RNA–protein pairs in 26.9 ms