RNA–Protein interactions for RNA: ENSMUST00000002708.4

Shh-201, Transcript of Sonic hedgehog protein, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Shh, Length 2,847 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shh-201ENSMUST00000002708 Tbx3P70324 741 aa17.31■□□□□ 0.36
Shh-201ENSMUST00000002708 Epas1P97481 874 aa17.31■□□□□ 0.36
Shh-201ENSMUST00000002708 Atp11aP98197 1187 aa17.31■□□□□ 0.36
Shh-201ENSMUST00000002708 Q3UJP5 209 aa17.31■□□□□ 0.36
Shh-201ENSMUST00000002708 Tmem65Q4VAE3 234 aa17.31■□□□□ 0.36
Shh-201ENSMUST00000002708 Naif1Q6PFD7 327 aa17.31■□□□□ 0.36
Shh-201ENSMUST00000002708 Ankzf1Q80UU1 748 aaKnown RBP17.31■□□□□ 0.36
Shh-201ENSMUST00000002708 Znf879Q8BI99 563 aa17.31■□□□□ 0.36
Shh-201ENSMUST00000002708 Mfsd5Q921Y4 450 aa17.31■□□□□ 0.36
Shh-201ENSMUST00000002708 Pgm1Q9D0F9 562 aa17.31■□□□□ 0.36
Shh-201ENSMUST00000002708 Cep72Q9D3R3 646 aa17.31■□□□□ 0.36
Shh-201ENSMUST00000002708 Pdzd4Q9QY39 772 aa17.31■□□□□ 0.36
Shh-201ENSMUST00000002708 Taf4bG5E8Z2 855 aa17.3■□□□□ 0.36
Shh-201ENSMUST00000002708 CflarO35732 481 aa17.3■□□□□ 0.36
Shh-201ENSMUST00000002708 NyxP83503 476 aa17.3■□□□□ 0.36
Shh-201ENSMUST00000002708 2700097O09RikQ6PGK3 301 aa17.3■□□□□ 0.36
Shh-201ENSMUST00000002708 Tph2Q8CGV2 488 aa17.3■□□□□ 0.36
Shh-201ENSMUST00000002708 SarnpQ9D1J3 210 aaKnown RBP17.3■□□□□ 0.36
Shh-201ENSMUST00000002708 Mtmr1Q9Z2C4 669 aa17.3■□□□□ 0.36
Shh-201ENSMUST00000002708 Plekhg4A0A1L1SU27 1217 aa17.3■□□□□ 0.36
Shh-201ENSMUST00000002708 Oog1E9Q5G7 496 aa17.3■□□□□ 0.36
Shh-201ENSMUST00000002708 NumblO08919 604 aa17.3■□□□□ 0.36
Shh-201ENSMUST00000002708 Capn6O35646 641 aa17.3■□□□□ 0.36
Shh-201ENSMUST00000002708 SpibO35906 267 aa17.3■□□□□ 0.36
Shh-201ENSMUST00000002708 RpsaP14206 295 aaKnown RBP17.3■□□□□ 0.36
Shh-201ENSMUST00000002708 Zbtb14Q08376 449 aa17.3■□□□□ 0.36
Shh-201ENSMUST00000002708 Ppm1jQ149T7 507 aa17.3■□□□□ 0.36
Shh-201ENSMUST00000002708 CpQ61147 1061 aa17.3■□□□□ 0.36
Shh-201ENSMUST00000002708 Znf579Q80VM4 562 aa17.3■□□□□ 0.36
Shh-201ENSMUST00000002708 Fbxl5Q8C2S5 690 aa17.3■□□□□ 0.36
Shh-201ENSMUST00000002708 Lrrc8cQ8R502 803 aa17.3■□□□□ 0.36
Shh-201ENSMUST00000002708 Rpap3Q9D706 660 aa17.3■□□□□ 0.36
Shh-201ENSMUST00000002708 Vwa5b1A9Z1V5 1215 aa17.29■□□□□ 0.36
Shh-201ENSMUST00000002708 Chil3O35744 398 aa17.29■□□□□ 0.36
Shh-201ENSMUST00000002708 Aoc3O70423 765 aa17.29■□□□□ 0.36
Shh-201ENSMUST00000002708 CalrP14211 416 aaKnown RBP17.29■□□□□ 0.36
Shh-201ENSMUST00000002708 Il2rbP16297 539 aa17.29■□□□□ 0.36
Shh-201ENSMUST00000002708 Phka1P18826 1241 aa17.29■□□□□ 0.36
Shh-201ENSMUST00000002708 Sstr1P30873 391 aa17.29■□□□□ 0.36
Shh-201ENSMUST00000002708 Pou6f1Q07916 301 aa17.29■□□□□ 0.36
Shh-201ENSMUST00000002708 Stip1Q60864 543 aaKnown RBP17.29■□□□□ 0.36
Shh-201ENSMUST00000002708 Tmem145Q8C4U2 746 aa17.29■□□□□ 0.36
Shh-201ENSMUST00000002708 Apol7cQ8C6E1 369 aa17.29■□□□□ 0.36
Shh-201ENSMUST00000002708 ClasrpQ8CFC7 668 aa17.29■□□□□ 0.36
Shh-201ENSMUST00000002708 Kdm1bQ8CIG3 826 aa17.29■□□□□ 0.36
Shh-201ENSMUST00000002708 Ivns1abpQ920Q8 642 aa17.29■□□□□ 0.36
Shh-201ENSMUST00000002708 Usp26Q99MX1 835 aa17.29■□□□□ 0.36
Shh-201ENSMUST00000002708 Ino80bQ99PT3 375 aaKnown RBP17.29■□□□□ 0.36
Shh-201ENSMUST00000002708 JrklB2RRL2 523 aa17.29■□□□□ 0.36
Shh-201ENSMUST00000002708 Rpl21O09167 160 aaKnown RBP17.29■□□□□ 0.36
Shh-201ENSMUST00000002708 PorP37040 678 aa17.29■□□□□ 0.36
Shh-201ENSMUST00000002708 Tbc1d10aP58802 500 aa17.29■□□□□ 0.36
Shh-201ENSMUST00000002708 Ppp1r12cQ3UMT1 782 aa17.29■□□□□ 0.36
Shh-201ENSMUST00000002708 Snx19Q6P4T1 997 aa17.29■□□□□ 0.36
Shh-201ENSMUST00000002708 Frmd5Q6P5H6 517 aa17.29■□□□□ 0.36
Shh-201ENSMUST00000002708 Znf507Q6ZPY5 941 aa17.29■□□□□ 0.36
Shh-201ENSMUST00000002708 Rhot1Q8BG51 631 aa17.29■□□□□ 0.36
Shh-201ENSMUST00000002708 Spata21Q8BHW6 681 aa17.29■□□□□ 0.36
Shh-201ENSMUST00000002708 Dclre1bQ8C7W7 541 aa17.29■□□□□ 0.36
Shh-201ENSMUST00000002708 Bub1bQ9Z1S0 1052 aa17.29■□□□□ 0.36
Shh-201ENSMUST00000002708 PhipQ8VDD9 1821 aaKnown RBP17.29■□□□□ 0.36
Shh-201ENSMUST00000002708 Pdzrn4E9PUZ9 1014 aa17.29■□□□□ 0.36
Shh-201ENSMUST00000002708 Tnni3P48787 211 aa17.29■□□□□ 0.36
Shh-201ENSMUST00000002708 Ccng1P51945 294 aa17.29■□□□□ 0.36
Shh-201ENSMUST00000002708 Ece1Q4PZA2 769 aa17.29■□□□□ 0.36
Shh-201ENSMUST00000002708 Ssxb5Q6XAS2 159 aa17.29■□□□□ 0.36
Shh-201ENSMUST00000002708 Mcph1Q7TT79 822 aa17.29■□□□□ 0.36
Shh-201ENSMUST00000002708 Olfr390Q8VEZ7 311 aa17.29■□□□□ 0.36
Shh-201ENSMUST00000002708 Tbrg4Q91YM4 630 aaKnown RBP17.29■□□□□ 0.36
Shh-201ENSMUST00000002708 Cdk5rap3Q99LM2 503 aa17.29■□□□□ 0.36
Shh-201ENSMUST00000002708 XkQ9QXY7 446 aa17.29■□□□□ 0.36
Shh-201ENSMUST00000002708 Sash1P59808 1230 aa17.28■□□□□ 0.36
Shh-201ENSMUST00000002708 Gm13103Q4VAD2 491 aa17.28■□□□□ 0.36
Shh-201ENSMUST00000002708 RilpQ5ND29 369 aa17.28■□□□□ 0.36
Shh-201ENSMUST00000002708 Gstt2Q61133 244 aa17.28■□□□□ 0.36
Shh-201ENSMUST00000002708 Osbpl2Q8BX94 484 aa17.28■□□□□ 0.36
Shh-201ENSMUST00000002708 Slc39a13Q8BZH0 361 aa17.28■□□□□ 0.36
Shh-201ENSMUST00000002708 Tspan8Q8R3G9 235 aa17.28■□□□□ 0.36
Shh-201ENSMUST00000002708 Cables1Q9ESJ1 568 aa17.28■□□□□ 0.36
Shh-201ENSMUST00000002708 Lrrc63A6H694 637 aa17.28■□□□□ 0.36
Shh-201ENSMUST00000002708 E2f6O54917 272 aa17.28■□□□□ 0.36
Shh-201ENSMUST00000002708 Birc5O70201 140 aa17.28■□□□□ 0.36
Shh-201ENSMUST00000002708 Eef1bO70251 225 aaKnown RBP17.28■□□□□ 0.36
Shh-201ENSMUST00000002708 Hoxc10P31257 342 aa17.28■□□□□ 0.36
Shh-201ENSMUST00000002708 Pdha1P35486 390 aaKnown RBP17.28■□□□□ 0.36
Shh-201ENSMUST00000002708 NfiaQ02780 532 aa17.28■□□□□ 0.36
Shh-201ENSMUST00000002708 Smtnl2Q8CI12 456 aa17.28■□□□□ 0.36
Shh-201ENSMUST00000002708 OlahQ8R197 265 aa17.28■□□□□ 0.36
Shh-201ENSMUST00000002708 Tmem206Q9D771 350 aa17.28■□□□□ 0.36
Shh-201ENSMUST00000002708 Sfmbt1Q9JMD1 863 aa17.28■□□□□ 0.36
Shh-201ENSMUST00000002708 Slc22a3Q9WTW5 551 aa17.28■□□□□ 0.36
Shh-201ENSMUST00000002708 Spata31d1aE9QA35 1336 aa17.28■□□□□ 0.36
Shh-201ENSMUST00000002708 Ccdc6D3YZP9 469 aa17.27■□□□□ 0.36
Shh-201ENSMUST00000002708 Ptp4a2O70274 167 aa17.27■□□□□ 0.36
Shh-201ENSMUST00000002708 Zfyve27Q3TXX3 415 aa17.27■□□□□ 0.36
Shh-201ENSMUST00000002708 Cnksr2Q80YA9 1032 aa17.27■□□□□ 0.36
Shh-201ENSMUST00000002708 Adgra1Q8C4G9 578 aa17.27■□□□□ 0.36
Shh-201ENSMUST00000002708 Rell1Q8K2J7 272 aa17.27■□□□□ 0.36
Shh-201ENSMUST00000002708 Med10Q9CXU0 135 aa17.27■□□□□ 0.36
Shh-201ENSMUST00000002708 Pias1O88907 651 aa17.27■□□□□ 0.35
Retrieved 100 of 22,080 RNA–protein pairs in 32.5 ms