RNA–Protein interactions for RNA: YLR397C

AFG2, Transcript of ATPase of the CDC48/PAS1/SEC18 (AAA) family, forms a hexameric complex, yeastyeast

Gene AFG2, Length 2,343 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
AFG2YLR397C YEL077W-AP0CX95 160 aa6.41□□□□□ -1.38
AFG2YLR397C YGR296C-BP0CX96 160 aa6.41□□□□□ -1.38
AFG2YLR397C YPL283W-BP0CX97 160 aa6.41□□□□□ -1.38
AFG2YLR397C YPR204C-AP0CX98 160 aa6.41□□□□□ -1.38
AFG2YLR397C PPA2P28239 310 aa6.41□□□□□ -1.38
AFG2YLR397C GLN1P32288 370 aaKnown RBP6.41□□□□□ -1.38
AFG2YLR397C YOR062CP36025 268 aa6.41□□□□□ -1.38
AFG2YLR397C SSN3P39073 555 aa6.41□□□□□ -1.38
AFG2YLR397C ASM4Q05166 528 aa6.41□□□□□ -1.38
AFG2YLR397C STP4Q07351 490 aa6.41□□□□□ -1.38
AFG2YLR397C YOL073CQ08232 322 aa6.41□□□□□ -1.38
AFG2YLR397C SME1Q12330 94 aaPredicted RBP6.41□□□□□ -1.38
AFG2YLR397C URA5P13298 226 aaKnown RBP6.41□□□□□ -1.38
AFG2YLR397C ZRT1P32804 376 aa6.41□□□□□ -1.38
AFG2YLR397C MRPL16P38064 232 aa6.41□□□□□ -1.38
AFG2YLR397C TRM7P38238 310 aaKnown RBP6.41□□□□□ -1.38
AFG2YLR397C UBC11P52492 156 aa6.41□□□□□ -1.38
AFG2YLR397C RTT102P53330 157 aa6.41□□□□□ -1.38
AFG2YLR397C MCR1P36060 302 aaKnown RBP6.4□□□□□ -1.38
AFG2YLR397C MSL1P40567 111 aaPredicted RBP6.4□□□□□ -1.38
AFG2YLR397C YJR124CP47159 448 aa6.4□□□□□ -1.38
AFG2YLR397C YGL230CP53074 147 aa6.4□□□□□ -1.38
AFG2YLR397C CAB4P53332 305 aa6.4□□□□□ -1.38
AFG2YLR397C GAS1P22146 559 aaKnown RBP6.39□□□□□ -1.39
AFG2YLR397C SCO1P23833 295 aa6.39□□□□□ -1.39
AFG2YLR397C TRX3P25372 127 aa6.39□□□□□ -1.39
AFG2YLR397C GAR1P28007 205 aaKnown RBP6.39□□□□□ -1.39
AFG2YLR397C BTT1P40314 149 aaPredicted RBP6.39□□□□□ -1.39
AFG2YLR397C ATF1P40353 525 aa6.39□□□□□ -1.39
AFG2YLR397C MRPL19P53875 158 aa6.39□□□□□ -1.39
AFG2YLR397C APS2Q00381 147 aa6.39□□□□□ -1.39
AFG2YLR397C YMR166CQ03829 368 aa6.39□□□□□ -1.39
AFG2YLR397C SDH7Q04401 133 aa6.39□□□□□ -1.39
AFG2YLR397C GRH1Q04410 372 aaKnown RBP6.39□□□□□ -1.39
AFG2YLR397C JID1Q12350 301 aa6.39□□□□□ -1.39
AFG2YLR397C YLR363W-AQ3E747 85 aa6.39□□□□□ -1.39
AFG2YLR397C CCH1P50077 2039 aa6.39□□□□□ -1.39
AFG2YLR397C YCR100CP25606 316 aa6.39□□□□□ -1.39
AFG2YLR397C TRR1P29509 319 aaKnown RBP6.39□□□□□ -1.39
AFG2YLR397C MRP49P32388 137 aa6.39□□□□□ -1.39
AFG2YLR397C VID24P38263 362 aa6.39□□□□□ -1.39
AFG2YLR397C RPS20P38701 121 aaKnown RBP6.39□□□□□ -1.39
AFG2YLR397C BNA2P47125 453 aa6.39□□□□□ -1.39
AFG2YLR397C YIP5P53108 310 aa6.39□□□□□ -1.39
AFG2YLR397C CSL4P53859 292 aaPredicted RBP6.39□□□□□ -1.39
AFG2YLR397C TAZ1Q06510 381 aa6.39□□□□□ -1.39
AFG2YLR397C IES4Q08561 116 aa6.39□□□□□ -1.39
AFG2YLR397C YPL162CQ12042 273 aa6.39□□□□□ -1.39
AFG2YLR397C YPT1P01123 206 aaKnown RBP6.38□□□□□ -1.39
AFG2YLR397C SIS1P25294 352 aaKnown RBP6.38□□□□□ -1.39
AFG2YLR397C MKK2P32491 506 aa6.38□□□□□ -1.39
AFG2YLR397C KTI12P34253 313 aaKnown RBP6.38□□□□□ -1.39
AFG2YLR397C YKR070WP36151 352 aaKnown RBP6.38□□□□□ -1.39
AFG2YLR397C MRPL24P36525 258 aaPredicted RBP6.38□□□□□ -1.39
AFG2YLR397C AZF1P41696 914 aa6.38□□□□□ -1.39
AFG2YLR397C CWP2P43497 92 aa6.38□□□□□ -1.39
AFG2YLR397C ALG9P53868 555 aaKnown RBP6.38□□□□□ -1.39
AFG2YLR397C YMR310CQ04867 317 aaPredicted RBP6.38□□□□□ -1.39
AFG2YLR397C FCY1Q12178 158 aa6.38□□□□□ -1.39
AFG2YLR397C PHO85P17157 305 aa6.38□□□□□ -1.39
AFG2YLR397C COX10P21592 462 aa6.38□□□□□ -1.39
AFG2YLR397C AGA2P32781 87 aa6.38□□□□□ -1.39
AFG2YLR397C YKL102CP34249 101 aa6.38□□□□□ -1.39
AFG2YLR397C SWD2P36104 329 aaPredicted RBP6.38□□□□□ -1.39
AFG2YLR397C SLM6P38343 150 aa6.38□□□□□ -1.39
AFG2YLR397C SLG1P54867 378 aa6.38□□□□□ -1.39
AFG2YLR397C UBC7Q02159 165 aa6.38□□□□□ -1.39
AFG2YLR397C HNT1Q04344 158 aaKnown RBP6.38□□□□□ -1.39
AFG2YLR397C RNQ1P25367 405 aa6.37□□□□□ -1.39
AFG2YLR397C PAM17P36147 197 aa6.37□□□□□ -1.39
AFG2YLR397C VBA2P38358 474 aaKnown RBP6.37□□□□□ -1.39
AFG2YLR397C YGP1P38616 354 aaKnown RBP6.37□□□□□ -1.39
AFG2YLR397C HST3P53687 447 aa6.37□□□□□ -1.39
AFG2YLR397C YCR024C-BQ3E7Z8 88 aa6.37□□□□□ -1.39
AFG2YLR397C RPL7AP05737 244 aaKnown RBP6.37□□□□□ -1.39
AFG2YLR397C MRPL20P22354 195 aaPredicted RBP6.37□□□□□ -1.39
AFG2YLR397C YKL070WP36087 169 aa6.37□□□□□ -1.39
AFG2YLR397C GPP2P40106 250 aaKnown RBP6.37□□□□□ -1.39
AFG2YLR397C OST2P46964 130 aa6.37□□□□□ -1.39
AFG2YLR397C YJL118WP47022 219 aa6.37□□□□□ -1.39
AFG2YLR397C FCF1Q05498 189 aaPredicted RBP6.37□□□□□ -1.39
AFG2YLR397C RPL27AP0C2H6 136 aaKnown RBP6.36□□□□□ -1.39
AFG2YLR397C RPL27BP0C2H7 136 aaKnown RBP6.36□□□□□ -1.39
AFG2YLR397C ATX1P38636 73 aa6.36□□□□□ -1.39
AFG2YLR397C INM1P38710 295 aa6.36□□□□□ -1.39
AFG2YLR397C UME6P39001 836 aa6.36□□□□□ -1.39
AFG2YLR397C STP3Q05937 343 aa6.36□□□□□ -1.39
AFG2YLR397C CDC21P06785 304 aa6.36□□□□□ -1.39
AFG2YLR397C SPO13P23624 291 aa6.36□□□□□ -1.39
AFG2YLR397C MRPL27P36526 146 aaPredicted RBP6.36□□□□□ -1.39
AFG2YLR397C YFR057WP43625 151 aa6.36□□□□□ -1.39
AFG2YLR397C WSC2P53832 503 aa6.36□□□□□ -1.39
AFG2YLR397C KKQ8P36004 724 aa6.35□□□□□ -1.39
AFG2YLR397C PHO88P38264 188 aaPredicted RBP6.35□□□□□ -1.39
AFG2YLR397C YEA4P40004 342 aa6.35□□□□□ -1.39
AFG2YLR397C YMR074CQ04773 145 aa6.35□□□□□ -1.39
AFG2YLR397C YPR098CQ06089 161 aa6.35□□□□□ -1.39
AFG2YLR397C SWT1Q12104 458 aa6.35□□□□□ -1.39
AFG2YLR397C PEX11Q12462 236 aa6.35□□□□□ -1.39
AFG2YLR397C FIG2P25653 1609 aa6.35□□□□□ -1.39
Retrieved 100 of 5,963 RNA–protein pairs in 42 ms