RNA–Protein interactions for RNA: YJL172W

CPS1, Transcript of Vacuolar carboxypeptidase S, yeast

Gene CPS1, Length 1,731 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CPS1	YJL172W	IRA2	P19158	3079 aa		4.27	□□□□□ -1.73
CPS1	YJL172W	YLR302C	O13544	120 aa		4.26	□□□□□ -1.73
CPS1	YJL172W	GDH1	P07262	454 aa	Known RBP	4.26	□□□□□ -1.73
CPS1	YJL172W	MRP17	P28778	131 aa		4.26	□□□□□ -1.73
CPS1	YJL172W	KTI12	P34253	313 aa	Known RBP	4.26	□□□□□ -1.73
CPS1	YJL172W	CUE1	P38428	203 aa		4.26	□□□□□ -1.73
CPS1	YJL172W	HTD2	P38790	280 aa	Known RBP	4.26	□□□□□ -1.73
CPS1	YJL172W	ARO9	P38840	513 aa	Predicted RBP	4.26	□□□□□ -1.73
CPS1	YJL172W	FLX1	P40464	311 aa		4.26	□□□□□ -1.73
CPS1	YJL172W	PAU15	P40585	124 aa		4.26	□□□□□ -1.73
CPS1	YJL172W	IGO1	P53897	168 aa		4.26	□□□□□ -1.73
CPS1	YJL172W	SUR7	P54003	302 aa		4.26	□□□□□ -1.73
CPS1	YJL172W	RSM10	Q03201	203 aa		4.26	□□□□□ -1.73
CPS1	YJL172W	FIT1	Q04433	528 aa		4.26	□□□□□ -1.73
CPS1	YJL172W	MMT2	Q08970	484 aa		4.26	□□□□□ -1.73
CPS1	YJL172W	LAS17	Q12446	633 aa		4.26	□□□□□ -1.73
CPS1	YJL172W	YML003W	P0CF16	290 aa		4.26	□□□□□ -1.73
CPS1	YJL172W	BGL2	P15703	313 aa	Known RBP	4.26	□□□□□ -1.73
CPS1	YJL172W	PUT3	P25502	979 aa	Predicted RBP	4.26	□□□□□ -1.73
CPS1	YJL172W	MRPL11	P36521	249 aa	Predicted RBP	4.26	□□□□□ -1.73
CPS1	YJL172W	YHR210C	P38893	341 aa		4.26	□□□□□ -1.73
CPS1	YJL172W	YIL012W	P40551	113 aa		4.26	□□□□□ -1.73
CPS1	YJL172W	SYS1	P41544	203 aa		4.26	□□□□□ -1.73
CPS1	YJL172W	PFS2	P42841	465 aa	Known RBP	4.26	□□□□□ -1.73
CPS1	YJL172W	ERG25	P53045	309 aa		4.26	□□□□□ -1.73
CPS1	YJL172W	FHN1	P53279	174 aa		4.26	□□□□□ -1.73
CPS1	YJL172W	NRM1	P53718	249 aa		4.26	□□□□□ -1.73
CPS1	YJL172W	HHT1	P61830	136 aa		4.26	□□□□□ -1.73
CPS1	YJL172W	IZH1	Q03419	316 aa		4.26	□□□□□ -1.73
CPS1	YJL172W	YLR050C	Q12155	161 aa	Known RBP	4.26	□□□□□ -1.73
CPS1	YJL172W	YJR112W-A	Q3E743	109 aa		4.26	□□□□□ -1.73
CPS1	YJL172W	PAI3	P01094	68 aa		4.25	□□□□□ -1.73
CPS1	YJL172W	ANB1	P19211	157 aa		4.25	□□□□□ -1.73
CPS1	YJL172W	INO2	P26798	304 aa		4.25	□□□□□ -1.73
CPS1	YJL172W	GAR1	P28007	205 aa	Known RBP	4.25	□□□□□ -1.73
CPS1	YJL172W	YMC1	P32331	307 aa		4.25	□□□□□ -1.73
CPS1	YJL172W	RPL14B	P38754	138 aa	Known RBP	4.25	□□□□□ -1.73
CPS1	YJL172W	MRPL49	P40858	161 aa	Predicted RBP	4.25	□□□□□ -1.73
CPS1	YJL172W	MIC26	P50087	233 aa		4.25	□□□□□ -1.73
CPS1	YJL172W	ALG13	P53178	202 aa		4.25	□□□□□ -1.73
CPS1	YJL172W	COX18	P53239	316 aa		4.25	□□□□□ -1.73
CPS1	YJL172W	SCW10	Q04951	389 aa		4.25	□□□□□ -1.73
CPS1	YJL172W	HNT3	Q08702	217 aa		4.25	□□□□□ -1.73
CPS1	YJL172W	UBA3	Q99344	299 aa		4.25	□□□□□ -1.73
CPS1	YJL172W	MSW1	P04803	379 aa		4.24	□□□□□ -1.73
CPS1	YJL172W	NOP1	P15646	327 aa	Known RBP	4.24	□□□□□ -1.73
CPS1	YJL172W	FCY2	P17064	533 aa		4.24	□□□□□ -1.73
CPS1	YJL172W	PAD1	P33751	242 aa	Known RBP RIP-Chip data	4.24	□□□□□ -1.73	not detected
CPS1	YJL172W	TRS20	P38334	175 aa		4.24	□□□□□ -1.73
CPS1	YJL172W	RPS20	P38701	121 aa	Known RBP	4.24	□□□□□ -1.73
CPS1	YJL172W	RPL13B	P40212	199 aa	Known RBP	4.24	□□□□□ -1.73
CPS1	YJL172W	EMC5	P40540	141 aa		4.24	□□□□□ -1.73
CPS1	YJL172W	MOB2	P43563	287 aa		4.24	□□□□□ -1.73
CPS1	YJL172W	YJR015W	P47090	510 aa		4.24	□□□□□ -1.73
CPS1	YJL172W	OST3	P48439	350 aa		4.24	□□□□□ -1.73
CPS1	YJL172W	CDH1	P53197	566 aa		4.24	□□□□□ -1.73
CPS1	YJL172W	MSO1	P53604	210 aa	Known RBP	4.24	□□□□□ -1.73
CPS1	YJL172W	YNR071C	P53757	342 aa		4.24	□□□□□ -1.73
CPS1	YJL172W	RSM23	Q01163	450 aa		4.24	□□□□□ -1.73
CPS1	YJL172W	YKR011C	Q02209	353 aa		4.24	□□□□□ -1.73
CPS1	YJL172W	YMR320W	Q04897	101 aa		4.24	□□□□□ -1.73
CPS1	YJL172W	LIP2	Q06005	328 aa		4.24	□□□□□ -1.73
CPS1	YJL172W	PIN3	Q06449	215 aa		4.24	□□□□□ -1.73
CPS1	YJL172W	POS5	Q06892	414 aa		4.24	□□□□□ -1.73
CPS1	YJL172W	GEP3	Q08622	556 aa		4.24	□□□□□ -1.73
CPS1	YJL172W	NAT5	Q08689	176 aa		4.24	□□□□□ -1.73
CPS1	YJL172W	RAX2	Q12465	1220 aa		4.24	□□□□□ -1.73
CPS1	YJL172W	UBI4	P0CG63	381 aa	Known RBP	4.24	□□□□□ -1.73
CPS1	YJL172W	RPL40A	P0CH08	128 aa	Known RBP	4.24	□□□□□ -1.73
CPS1	YJL172W	RPL40B	P0CH09	128 aa	Known RBP	4.24	□□□□□ -1.73
CPS1	YJL172W	EMP70	P32802	667 aa		4.24	□□□□□ -1.73
CPS1	YJL172W	NTF2	P33331	125 aa	Known RBP	4.24	□□□□□ -1.73
CPS1	YJL172W	SLM6	P38343	150 aa		4.24	□□□□□ -1.73
CPS1	YJL172W	YHR177W	P38867	453 aa		4.24	□□□□□ -1.73
CPS1	YJL172W	PEX7	P39108	375 aa		4.24	□□□□□ -1.73
CPS1	YJL172W	YIL086C	P40503	102 aa		4.24	□□□□□ -1.73
CPS1	YJL172W	THG1	P53215	237 aa	Known RBP	4.24	□□□□□ -1.73
CPS1	YJL172W	CSL4	P53859	292 aa	Predicted RBP	4.24	□□□□□ -1.73
CPS1	YJL172W	RCE1	Q03530	315 aa		4.24	□□□□□ -1.73
CPS1	YJL172W	AVO2	Q04749	426 aa		4.24	□□□□□ -1.73
CPS1	YJL172W	TRI1	Q05024	226 aa		4.24	□□□□□ -1.73
CPS1	YJL172W	HEM25	Q07534	307 aa		4.24	□□□□□ -1.73
CPS1	YJL172W	TIR4	Q12218	487 aa	Predicted RBP	4.24	□□□□□ -1.73
CPS1	YJL172W	PRP46	Q12417	451 aa	Predicted RBP	4.24	□□□□□ -1.73
CPS1	YJL172W	YOS1	Q3E834	85 aa		4.24	□□□□□ -1.73
CPS1	YJL172W	GPI12	P23797	304 aa		4.23	□□□□□ -1.73
CPS1	YJL172W	SGN1	P40561	250 aa	Known RBP RIP-Chip data	4.23	□□□□□ -1.73	not detected
CPS1	YJL172W	CAT5	P41735	233 aa		4.23	□□□□□ -1.73
CPS1	YJL172W	POP1	P41812	875 aa		4.23	□□□□□ -1.73
CPS1	YJL172W	XPT1	P47165	209 aa		4.23	□□□□□ -1.73
CPS1	YJL172W	YNR048W	P53740	393 aa		4.23	□□□□□ -1.73
CPS1	YJL172W	ERG13	P54839	491 aa	Known RBP	4.23	□□□□□ -1.73
CPS1	YJL172W	THI74	Q04083	370 aa		4.23	□□□□□ -1.73
CPS1	YJL172W	GRH1	Q04410	372 aa	Known RBP	4.23	□□□□□ -1.73
CPS1	YJL172W	KEI1	Q06346	221 aa		4.23	□□□□□ -1.73
CPS1	YJL172W	YLR118C	Q12354	227 aa		4.23	□□□□□ -1.73
CPS1	YJL172W	STT4	P37297	1900 aa		4.22	□□□□□ -1.73
CPS1	YJL172W	YLR415C	O13578	112 aa		4.22	□□□□□ -1.73
CPS1	YJL172W	INO4	P13902	151 aa		4.22	□□□□□ -1.73
CPS1	YJL172W	HYP2	P23301	157 aa	Known RBP	4.22	□□□□□ -1.73

Retrieved 100 of 5,963 RNA–protein pairs in 18.9 ms