RNA–Protein interactions for RNA: YHR099W

TRA1, Transcript of Subunit of SAGA and NuA4 histone acetyltransferase complexes, yeastyeast

Gene TRA1, Length 11,235 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TRA1YHR099W YHR139C-AO13536 103 aa2.2□□□□□ -2.06
TRA1YHR099W RPS13P05756 151 aaKnown RBP2.2□□□□□ -2.06
TRA1YHR099W PAU19P0CE85 124 aa2.2□□□□□ -2.06
TRA1YHR099W SPC29P33419 253 aa2.2□□□□□ -2.06
TRA1YHR099W PAU16P35994 123 aa2.2□□□□□ -2.06
TRA1YHR099W YBR209WP38311 105 aa2.2□□□□□ -2.06
TRA1YHR099W BDH1P39714 382 aa2.2□□□□□ -2.06
TRA1YHR099W YIL067CP40514 678 aa2.2□□□□□ -2.06
TRA1YHR099W PAU15P40585 124 aa2.2□□□□□ -2.06
TRA1YHR099W VPS55P47111 140 aa2.2□□□□□ -2.06
TRA1YHR099W PAU17Q12370 124 aa2.2□□□□□ -2.06
TRA1YHR099W LAC1P28496 418 aa2.2□□□□□ -2.06
TRA1YHR099W MRP17P28778 131 aa2.2□□□□□ -2.06
TRA1YHR099W RRT1P38192 103 aa2.2□□□□□ -2.06
TRA1YHR099W MET30P39014 640 aa2.2□□□□□ -2.06
TRA1YHR099W FIS1P40515 155 aa2.2□□□□□ -2.06
TRA1YHR099W TES1P41903 349 aaKnown RBP2.2□□□□□ -2.06
TRA1YHR099W SSU1P41930 458 aa2.2□□□□□ -2.06
TRA1YHR099W DYN2Q02647 92 aa2.2□□□□□ -2.06
TRA1YHR099W NGL3Q03210 505 aa2.2□□□□□ -2.06
TRA1YHR099W POR1P04840 283 aaKnown RBP2.2□□□□□ -2.06
TRA1YHR099W YSP3P25036 478 aa2.2□□□□□ -2.06
TRA1YHR099W BUB2P26448 306 aaPredicted RBP2.2□□□□□ -2.06
TRA1YHR099W HPA3P39979 161 aa2.2□□□□□ -2.06
TRA1YHR099W SNX3Q08826 162 aaKnown RBP2.2□□□□□ -2.06
TRA1YHR099W AIM45Q12480 344 aaKnown RBP2.2□□□□□ -2.06
TRA1YHR099W AGP3P43548 558 aa2.2□□□□□ -2.06
TRA1YHR099W SPG1P50088 95 aa2.2□□□□□ -2.06
TRA1YHR099W PET191Q02772 108 aa2.2□□□□□ -2.06
TRA1YHR099W FCF1Q05498 189 aaPredicted RBP2.2□□□□□ -2.06
TRA1YHR099W HBT1Q07653 1046 aaKnown RBP2.2□□□□□ -2.06
TRA1YHR099W YOL073CQ08232 322 aa2.2□□□□□ -2.06
TRA1YHR099W NDD1Q08887 554 aa2.2□□□□□ -2.06
TRA1YHR099W YEL076C-AP0CX16 216 aa2.2□□□□□ -2.06
TRA1YHR099W YLR464WP0CX17 216 aa2.2□□□□□ -2.06
TRA1YHR099W PRE1P22141 198 aaKnown RBP2.2□□□□□ -2.06
TRA1YHR099W YEL076CP39971 216 aa2.2□□□□□ -2.06
TRA1YHR099W EMC4P53073 190 aa2.2□□□□□ -2.06
TRA1YHR099W YPL062WQ02781 134 aa2.2□□□□□ -2.06
TRA1YHR099W RXT3Q07458 294 aa2.2□□□□□ -2.06
TRA1YHR099W RDL1Q12305 139 aaKnown RBP2.2□□□□□ -2.06
TRA1YHR099W PAR32Q12515 295 aaKnown RBP2.2□□□□□ -2.06
TRA1YHR099W EMP70P32802 667 aa2.19□□□□□ -2.06
TRA1YHR099W AVT2P39981 480 aa2.19□□□□□ -2.06
TRA1YHR099W SRP21P32342 167 aa2.19□□□□□ -2.06
TRA1YHR099W MTR2P34232 184 aaKnown RBP2.19□□□□□ -2.06
TRA1YHR099W VBA5P36172 582 aa2.19□□□□□ -2.06
TRA1YHR099W AVT7P40501 490 aa2.19□□□□□ -2.06
TRA1YHR099W YIP5P53108 310 aa2.19□□□□□ -2.06
TRA1YHR099W MSO1P53604 210 aaKnown RBP2.19□□□□□ -2.06
TRA1YHR099W YDL242WQ07746 117 aa2.19□□□□□ -2.06
TRA1YHR099W YBL029C-AQ3E756 94 aa2.19□□□□□ -2.06
TRA1YHR099W GSC2P40989 1895 aa2.19□□□□□ -2.06
TRA1YHR099W MRP2P10663 115 aaPredicted RBP2.19□□□□□ -2.06
TRA1YHR099W CPT1P17898 393 aa2.19□□□□□ -2.06
TRA1YHR099W UTP30P36144 274 aaKnown RBP2.19□□□□□ -2.06
TRA1YHR099W CAX4P53223 239 aa2.19□□□□□ -2.06
TRA1YHR099W CGI121Q03705 181 aaKnown RBP2.19□□□□□ -2.06
TRA1YHR099W EMI1Q04406 187 aa2.19□□□□□ -2.06
TRA1YHR099W VPS68Q12016 184 aa2.19□□□□□ -2.06
TRA1YHR099W YPL119C-AQ3E751 87 aa2.19□□□□□ -2.06
TRA1YHR099W YOR032W-AQ8TGS1 66 aa2.19□□□□□ -2.06
TRA1YHR099W SUC2P00724 532 aa2.19□□□□□ -2.06
TRA1YHR099W ILV5P06168 395 aaKnown RBP2.19□□□□□ -2.06
TRA1YHR099W ARN1P38731 627 aa2.19□□□□□ -2.06
TRA1YHR099W YKE4P40544 346 aa2.19□□□□□ -2.06
TRA1YHR099W FIP1P45976 327 aa2.19□□□□□ -2.06
TRA1YHR099W PUF2Q12221 1075 aaKnown RBP RIP-Chip data2.19□□□□□ -2.06not detected
TRA1YHR099W SAT4P25333 603 aaKnown RBP2.19□□□□□ -2.06
TRA1YHR099W ERG2P32352 222 aa2.19□□□□□ -2.06
TRA1YHR099W PAU12P53343 120 aa2.19□□□□□ -2.06
TRA1YHR099W PGA1P53896 198 aa2.19□□□□□ -2.06
TRA1YHR099W YPL108WQ02872 168 aaPredicted RBP2.19□□□□□ -2.06
TRA1YHR099W FSH2Q05015 223 aa2.19□□□□□ -2.06
TRA1YHR099W ACM1Q08981 209 aa2.19□□□□□ -2.06
TRA1YHR099W CBT1P36038 271 aaPredicted RBP2.19□□□□□ -2.06
TRA1YHR099W SOL2P37262 315 aa2.19□□□□□ -2.06
TRA1YHR099W YEL073CP39974 107 aa2.19□□□□□ -2.06
TRA1YHR099W HHF1P02309 103 aaKnown RBP2.19□□□□□ -2.06
TRA1YHR099W PAU1P0CE88 120 aa2.19□□□□□ -2.06
TRA1YHR099W PAU14P0CE89 120 aa2.19□□□□□ -2.06
TRA1YHR099W PAU6P0CE90 120 aa2.19□□□□□ -2.06
TRA1YHR099W PAU18P0CE91 120 aa2.19□□□□□ -2.06
TRA1YHR099W PAU8P0CE92 120 aa2.19□□□□□ -2.06
TRA1YHR099W PAU11P0CE93 120 aa2.19□□□□□ -2.06
TRA1YHR099W SPT14P32363 452 aa2.19□□□□□ -2.06
TRA1YHR099W MMS21P38632 267 aa2.19□□□□□ -2.06
TRA1YHR099W PAU13P38725 120 aa2.19□□□□□ -2.06
TRA1YHR099W YNL320WP42840 284 aa2.19□□□□□ -2.06
TRA1YHR099W MIG2P53035 382 aa2.19□□□□□ -2.06
TRA1YHR099W PAU4P53427 120 aa2.19□□□□□ -2.06
TRA1YHR099W NSG2P53898 299 aa2.19□□□□□ -2.06
TRA1YHR099W PAU10Q03050 120 aa2.19□□□□□ -2.06
TRA1YHR099W STP4Q07351 490 aa2.19□□□□□ -2.06
TRA1YHR099W PAU20Q08322 120 aa2.19□□□□□ -2.06
TRA1YHR099W PAU9Q3E770 120 aa2.19□□□□□ -2.06
TRA1YHR099W COX5AP00424 153 aa2.19□□□□□ -2.06
TRA1YHR099W FUN19P28003 413 aaPredicted RBP2.19□□□□□ -2.06
TRA1YHR099W SFC1P33303 322 aa2.19□□□□□ -2.06
TRA1YHR099W PMU1P36069 295 aa2.19□□□□□ -2.06
Retrieved 100 of 5,963 RNA–protein pairs in 45.9 ms