RNA–Protein interactions for RNA: YHR087W

RTC3, Transcript of Protein of unknown function involved in RNA metabolism, yeastyeast

Gene RTC3, Length 336 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RTC3YHR087W YGL258W-AQ3E740 77 aa12.61□□□□□ -0.39
RTC3YHR087W ACP1P32463 125 aa12.6□□□□□ -0.39
RTC3YHR087W SGN1P40561 250 aaKnown RBP RIP-Chip data12.6□□□□□ -0.39not detected
RTC3YHR087W HXT14P42833 540 aa12.6□□□□□ -0.39
RTC3YHR087W YGL262WP53054 175 aa12.6□□□□□ -0.39
RTC3YHR087W TY1A-DR4O74302 440 aa12.59□□□□□ -0.39
RTC3YHR087W TY1A-AP0CX57 440 aa12.59□□□□□ -0.39
RTC3YHR087W TY1A-PR1P0CX58 440 aa12.59□□□□□ -0.39
RTC3YHR087W TY1A-ORP0CX59 440 aa12.59□□□□□ -0.39
RTC3YHR087W TY1A-PR2P0CX60 440 aa12.59□□□□□ -0.39
RTC3YHR087W TY1A-DR5P0CX65 440 aa12.59□□□□□ -0.39
RTC3YHR087W TY1A-ER2P0CX66 440 aa12.59□□□□□ -0.39
RTC3YHR087W TY1A-GR3P0CX67 440 aa12.59□□□□□ -0.39
RTC3YHR087W TY1A-LR1P0CX68 440 aa12.59□□□□□ -0.39
RTC3YHR087W TY1A-MR2P0CX69 440 aa12.59□□□□□ -0.39
RTC3YHR087W FLO5P38894 1075 aa12.59□□□□□ -0.39
RTC3YHR087W TY1A-JR2P47099 440 aa12.59□□□□□ -0.39
RTC3YHR087W RPL9BP51401 191 aaKnown RBP12.59□□□□□ -0.39
RTC3YHR087W SNO1Q03144 224 aa12.59□□□□□ -0.39
RTC3YHR087W TY1A-DR1Q03856 440 aa12.59□□□□□ -0.39
RTC3YHR087W TY1A-ML1Q04706 440 aaKnown RBP12.59□□□□□ -0.39
RTC3YHR087W TY1A-BRQ12217 440 aa12.59□□□□□ -0.39
RTC3YHR087W TY1A-NL2Q12470 440 aa12.59□□□□□ -0.39
RTC3YHR087W TY1A-GR2Q12485 440 aa12.59□□□□□ -0.39
RTC3YHR087W QCR9P22289 66 aa12.58□□□□□ -0.4
RTC3YHR087W SHB17P36136 271 aaKnown RBP12.58□□□□□ -0.4
RTC3YHR087W ECM14P38836 430 aa12.58□□□□□ -0.4
RTC3YHR087W YGR269WP40326 108 aa12.58□□□□□ -0.4
RTC3YHR087W ZEO1Q08245 113 aa12.58□□□□□ -0.4
RTC3YHR087W WSC3Q12215 556 aa12.58□□□□□ -0.4
RTC3YHR087W RIB4P50861 169 aaPredicted RBP12.57□□□□□ -0.4
RTC3YHR087W TIM21P53220 239 aa12.57□□□□□ -0.4
RTC3YHR087W FCY2P17064 533 aa12.56□□□□□ -0.4
RTC3YHR087W PAU4P53427 120 aa12.56□□□□□ -0.4
RTC3YHR087W YOR029WQ12243 111 aa12.56□□□□□ -0.4
RTC3YHR087W URA5P13298 226 aaKnown RBP12.55□□□□□ -0.4
RTC3YHR087W SPO13P23624 291 aa12.55□□□□□ -0.4
RTC3YHR087W CDC50P25656 391 aa12.55□□□□□ -0.4
RTC3YHR087W DAL3P32459 195 aa12.55□□□□□ -0.4
RTC3YHR087W TCA17P32613 152 aa12.55□□□□□ -0.4
RTC3YHR087W YOS1Q3E834 85 aa12.55□□□□□ -0.4
RTC3YHR087W SEC59P20048 519 aa12.54□□□□□ -0.4
RTC3YHR087W APA2P22108 325 aa12.54□□□□□ -0.4
RTC3YHR087W YER121WP40076 114 aa12.54□□□□□ -0.4
RTC3YHR087W PML1Q07930 204 aaPredicted RBP12.54□□□□□ -0.4
RTC3YHR087W ADH3P07246 375 aaKnown RBP12.53□□□□□ -0.4
RTC3YHR087W RPS25BP0C0T4 108 aaKnown RBP12.53□□□□□ -0.4
RTC3YHR087W MRPL4P36517 319 aa12.53□□□□□ -0.4
RTC3YHR087W ATG8P38182 117 aaRIP-Chip data12.53□□□□□ -0.4not detected
RTC3YHR087W PHS1P40857 217 aa12.53□□□□□ -0.4
RTC3YHR087W LRS4Q04087 347 aaKnown RBP12.53□□□□□ -0.4
RTC3YHR087W YPR145C-AQ2V2P0 78 aa12.53□□□□□ -0.4
RTC3YHR087W RPS25AQ3E792 108 aaPredicted RBP12.53□□□□□ -0.4
RTC3YHR087W TRP4P07285 380 aaPredicted RBP12.52□□□□□ -0.41
RTC3YHR087W TY1A-LR4P0C2I8 440 aaKnown RBP12.52□□□□□ -0.41
RTC3YHR087W PAU1P0CE88 120 aa12.52□□□□□ -0.41
RTC3YHR087W PAU14P0CE89 120 aa12.52□□□□□ -0.41
RTC3YHR087W PAU6P0CE90 120 aa12.52□□□□□ -0.41
RTC3YHR087W PAU18P0CE91 120 aa12.52□□□□□ -0.41
RTC3YHR087W PAU8P0CE92 120 aa12.52□□□□□ -0.41
RTC3YHR087W PAU11P0CE93 120 aa12.52□□□□□ -0.41
RTC3YHR087W TY1A-DR6P0CX70 440 aa12.52□□□□□ -0.41
RTC3YHR087W TY1A-ER1P0CX71 440 aa12.52□□□□□ -0.41
RTC3YHR087W TY1A-LR2P0CX72 440 aa12.52□□□□□ -0.41
RTC3YHR087W TY1A-PLP0CX73 440 aa12.52□□□□□ -0.41
RTC3YHR087W TY1A-JR1P0CX74 440 aa12.52□□□□□ -0.41
RTC3YHR087W TY1A-LR3P0CX75 440 aa12.52□□□□□ -0.41
RTC3YHR087W TY1A-ML2P0CX76 440 aa12.52□□□□□ -0.41
RTC3YHR087W ELO2P25358 347 aa12.52□□□□□ -0.41
RTC3YHR087W MTR2P34232 184 aaKnown RBP12.52□□□□□ -0.41
RTC3YHR087W PAU13P38725 120 aa12.52□□□□□ -0.41
RTC3YHR087W CTR2P38865 189 aa12.52□□□□□ -0.41
RTC3YHR087W YFL015CP43578 164 aa12.52□□□□□ -0.41
RTC3YHR087W MOG1P47123 218 aa12.52□□□□□ -0.41
RTC3YHR087W PAU10Q03050 120 aa12.52□□□□□ -0.41
RTC3YHR087W PAU20Q08322 120 aa12.52□□□□□ -0.41
RTC3YHR087W TY1A-GR1Q12085 440 aa12.52□□□□□ -0.41
RTC3YHR087W SME1Q12330 94 aaPredicted RBP12.52□□□□□ -0.41
RTC3YHR087W PAU9Q3E770 120 aa12.52□□□□□ -0.41
RTC3YHR087W TY1A-PR3Q6Q5H1 440 aaKnown RBP12.52□□□□□ -0.41
RTC3YHR087W TY1A-OLQ92392 440 aaKnown RBP12.52□□□□□ -0.41
RTC3YHR087W SPC29P33419 253 aa12.51□□□□□ -0.41
RTC3YHR087W RPL14AP36105 138 aaKnown RBP12.51□□□□□ -0.41
RTC3YHR087W RPL14BP38754 138 aaKnown RBP12.51□□□□□ -0.41
RTC3YHR087W WSS1P38838 269 aa12.51□□□□□ -0.41
RTC3YHR087W LSM4P40070 187 aaKnown RBP12.51□□□□□ -0.41
RTC3YHR087W DFG10P40526 253 aa12.51□□□□□ -0.41
RTC3YHR087W YAP1802P53309 568 aa12.51□□□□□ -0.41
RTC3YHR087W FRQ1Q06389 190 aa12.51□□□□□ -0.41
RTC3YHR087W USV1Q12132 391 aa12.51□□□□□ -0.41
RTC3YHR087W LAC1P28496 418 aa12.5□□□□□ -0.41
RTC3YHR087W YBL059WP34224 193 aa12.5□□□□□ -0.41
RTC3YHR087W ATP3P38077 311 aaKnown RBP12.5□□□□□ -0.41
RTC3YHR087W NSA2P40078 261 aaKnown RBP12.5□□□□□ -0.41
RTC3YHR087W GTT1P40582 234 aa12.5□□□□□ -0.41
RTC3YHR087W SSU72P53538 206 aaPredicted RBP12.5□□□□□ -0.41
RTC3YHR087W SMM1P53720 384 aaKnown RBP12.5□□□□□ -0.41
RTC3YHR087W YNR064CP53750 290 aa12.5□□□□□ -0.41
RTC3YHR087W BOR1P53838 576 aa12.5□□□□□ -0.41
RTC3YHR087W SNA4Q07549 140 aa12.5□□□□□ -0.41
Retrieved 100 of 5,963 RNA–protein pairs in 7.6 ms