RNA–Protein interactions for RNA: YDL058W

USO1, Transcript of Essential protein involved in vesicle-mediated ER to Golgi transport, yeastyeast

Gene USO1, Length 5,373 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
USO1YDL058W MSB2P32334 1306 aa1.83□□□□□ -2.12
USO1YDL058W MBF1O14467 151 aaKnown RBP1.82□□□□□ -2.12
USO1YDL058W MSN2P33748 704 aa1.82□□□□□ -2.12
USO1YDL058W SOR1P35497 357 aaKnown RBP1.82□□□□□ -2.12
USO1YDL058W SMP1P38128 452 aa1.82□□□□□ -2.12
USO1YDL058W THI2P38141 450 aa1.82□□□□□ -2.12
USO1YDL058W IPT1P38954 527 aa1.82□□□□□ -2.12
USO1YDL058W YEL073CP39974 107 aa1.82□□□□□ -2.12
USO1YDL058W YIL152WP40455 235 aa1.82□□□□□ -2.12
USO1YDL058W SBH1P52870 82 aa1.82□□□□□ -2.12
USO1YDL058W COS10P52924 374 aa1.82□□□□□ -2.12
USO1YDL058W CDC14Q00684 551 aa1.82□□□□□ -2.12
USO1YDL058W NUP100Q02629 959 aa1.82□□□□□ -2.12
USO1YDL058W TPP1Q03796 238 aa1.82□□□□□ -2.12
USO1YDL058W ARC18Q05933 178 aaKnown RBP1.82□□□□□ -2.12
USO1YDL058W SOR2Q07786 357 aa1.82□□□□□ -2.12
USO1YDL058W NDD1Q08887 554 aa1.82□□□□□ -2.12
USO1YDL058W YOR376WQ08900 122 aa1.82□□□□□ -2.12
USO1YDL058W EMC6Q12431 108 aa1.82□□□□□ -2.12
USO1YDL058W YEL009C-AA0A023PZF2 135 aa1.82□□□□□ -2.12
USO1YDL058W YOL163WP0CF20 169 aa1.82□□□□□ -2.12
USO1YDL058W MXR2P25566 168 aa1.82□□□□□ -2.12
USO1YDL058W AHT1P29589 182 aa1.82□□□□□ -2.12
USO1YDL058W ZRT1P32804 376 aa1.82□□□□□ -2.12
USO1YDL058W YPT10P38146 199 aa1.82□□□□□ -2.12
USO1YDL058W MBA1P38300 278 aa1.82□□□□□ -2.12
USO1YDL058W SNM1P40993 198 aa1.82□□□□□ -2.12
USO1YDL058W AIM24P47127 394 aa1.82□□□□□ -2.12
USO1YDL058W YGL149WP53116 101 aa1.82□□□□□ -2.12
USO1YDL058W ATX2Q12067 313 aa1.82□□□□□ -2.12
USO1YDL058W SIR4P11978 1358 aa1.82□□□□□ -2.12
USO1YDL058W CAT8P39113 1433 aa1.82□□□□□ -2.12
USO1YDL058W FYV5P25585 152 aa1.82□□□□□ -2.12
USO1YDL058W SPT14P32363 452 aa1.82□□□□□ -2.12
USO1YDL058W PHA2P32452 334 aa1.82□□□□□ -2.12
USO1YDL058W SCM4P32564 187 aa1.82□□□□□ -2.12
USO1YDL058W SDS24P38314 527 aa1.82□□□□□ -2.12
USO1YDL058W YIP1P53039 248 aa1.82□□□□□ -2.12
USO1YDL058W DIG1Q03063 452 aaKnown RBP1.82□□□□□ -2.12
USO1YDL058W TPO3Q06451 622 aa1.82□□□□□ -2.12
USO1YDL058W DGA1Q08650 418 aa1.82□□□□□ -2.12
USO1YDL058W SLM3Q12093 417 aa1.82□□□□□ -2.12
USO1YDL058W PRM7Q12459 698 aa1.82□□□□□ -2.12
USO1YDL058W YMR316C-AI2HB70 103 aa1.82□□□□□ -2.12
USO1YDL058W MRS1P07266 363 aa1.82□□□□□ -2.12
USO1YDL058W CHO1P08456 276 aa1.82□□□□□ -2.12
USO1YDL058W RPS21AP0C0V8 87 aaKnown RBP1.82□□□□□ -2.12
USO1YDL058W RPS4AP0CX35 261 aaKnown RBP1.82□□□□□ -2.12
USO1YDL058W RPS4BP0CX36 261 aaKnown RBP1.82□□□□□ -2.12
USO1YDL058W YER190C-BP0CX94 160 aa1.82□□□□□ -2.12
USO1YDL058W YEL077W-AP0CX95 160 aa1.82□□□□□ -2.12
USO1YDL058W YGR296C-BP0CX96 160 aa1.82□□□□□ -2.12
USO1YDL058W YPL283W-BP0CX97 160 aa1.82□□□□□ -2.12
USO1YDL058W YPR204C-AP0CX98 160 aa1.82□□□□□ -2.12
USO1YDL058W GLN3P18494 730 aa1.82□□□□□ -2.12
USO1YDL058W GLC7P32598 312 aaKnown RBP1.82□□□□□ -2.12
USO1YDL058W VMA11P32842 164 aa1.82□□□□□ -2.12
USO1YDL058W TRM7P38238 310 aaKnown RBP1.82□□□□□ -2.12
USO1YDL058W YER121WP40076 114 aa1.82□□□□□ -2.12
USO1YDL058W YIL012WP40551 113 aa1.82□□□□□ -2.12
USO1YDL058W PHS1P40857 217 aa1.82□□□□□ -2.12
USO1YDL058W GWT1P47026 490 aa1.82□□□□□ -2.12
USO1YDL058W HMS2P47175 358 aa1.82□□□□□ -2.12
USO1YDL058W RHO3Q00245 231 aaKnown RBP1.82□□□□□ -2.12
USO1YDL058W YBT1P32386 1661 aa1.82□□□□□ -2.12
USO1YDL058W COQ2P32378 372 aa1.81□□□□□ -2.12
USO1YDL058W PHO88P38264 188 aaPredicted RBP1.81□□□□□ -2.12
USO1YDL058W TRR2P38816 342 aa1.81□□□□□ -2.12
USO1YDL058W YHR138CP38841 114 aaPredicted RBP1.81□□□□□ -2.12
USO1YDL058W ERJ5P43613 295 aaPredicted RBP1.81□□□□□ -2.12
USO1YDL058W MHP1P43638 1398 aa1.81□□□□□ -2.12
USO1YDL058W ARP3P47117 449 aaKnown RBP1.81□□□□□ -2.12
USO1YDL058W PNC1P53184 216 aaKnown RBP1.81□□□□□ -2.12
USO1YDL058W TIM8P57744 87 aa1.81□□□□□ -2.12
USO1YDL058W FMN1Q03778 218 aa1.81□□□□□ -2.12
USO1YDL058W SCW10Q04951 389 aa1.81□□□□□ -2.12
USO1YDL058W GRX8Q05926 109 aa1.81□□□□□ -2.12
USO1YDL058W PIB1Q06651 286 aa1.81□□□□□ -2.12
USO1YDL058W YOR105WQ08504 108 aa1.81□□□□□ -2.12
USO1YDL058W RIB3Q99258 208 aa1.81□□□□□ -2.12
USO1YDL058W RPL9AP05738 191 aaKnown RBP1.81□□□□□ -2.12
USO1YDL058W OCH1P31755 480 aa1.81□□□□□ -2.12
USO1YDL058W PUB1P32588 453 aaKnown RBP RIP-Chip data1.81□□□□□ -2.12not detected
USO1YDL058W YKL102CP34249 101 aa1.81□□□□□ -2.12
USO1YDL058W YKR070WP36151 352 aaKnown RBP1.81□□□□□ -2.12
USO1YDL058W ECM34P38728 170 aa1.81□□□□□ -2.12
USO1YDL058W GOS1P38736 223 aa1.81□□□□□ -2.12
USO1YDL058W CHS7P38843 316 aa1.81□□□□□ -2.12
USO1YDL058W ERV46P39727 415 aa1.81□□□□□ -2.12
USO1YDL058W YIL054WP40524 105 aa1.81□□□□□ -2.12
USO1YDL058W YIL029CP40538 142 aa1.81□□□□□ -2.12
USO1YDL058W DSK2P48510 373 aa1.81□□□□□ -2.12
USO1YDL058W RPL9BP51401 191 aaKnown RBP1.81□□□□□ -2.12
USO1YDL058W VPS71Q03433 280 aa1.81□□□□□ -2.12
USO1YDL058W IRC19Q07843 230 aa1.81□□□□□ -2.12
USO1YDL058W RRG7Q08774 242 aaPredicted RBP1.81□□□□□ -2.12
USO1YDL058W TAD3Q9URQ3 322 aa1.81□□□□□ -2.12
USO1YDL058W RPS14AP06367 137 aaKnown RBP1.81□□□□□ -2.12
USO1YDL058W BET1P22804 142 aa1.81□□□□□ -2.12
USO1YDL058W MIR1P23641 311 aaKnown RBP1.81□□□□□ -2.12
Retrieved 100 of 5,963 RNA–protein pairs in 9.8 ms