RNA–Protein interactions for RNA: YDL042C

SIR2, Transcript of Conserved NAD+ dependent histone deacetylase of the Sirtuin family, yeast

Gene SIR2, Length 1,689 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SIR2	YDL042C	CAT5	P41735	233 aa		3.56	□□□□□ -1.84
SIR2	YDL042C	YRB1	P41920	201 aa	Known RBP	3.56	□□□□□ -1.84
SIR2	YDL042C	COS6	P53344	381 aa		3.56	□□□□□ -1.84
SIR2	YDL042C	YMR31	P19955	123 aa		3.55	□□□□□ -1.84
SIR2	YDL042C	MRPL15	P36523	253 aa		3.55	□□□□□ -1.84
SIR2	YDL042C	SNZ1	Q03148	297 aa		3.55	□□□□□ -1.84
SIR2	YDL042C	YCL012C	Q8J0M4	134 aa		3.55	□□□□□ -1.84
SIR2	YDL042C	TRA1	P38811	3744 aa		3.55	□□□□□ -1.84
SIR2	YDL042C	YHR032W-A	P0C5N6	59 aa		3.55	□□□□□ -1.84
SIR2	YDL042C	NMT1	P14743	455 aa		3.55	□□□□□ -1.84
SIR2	YDL042C	BUB2	P26448	306 aa	Predicted RBP	3.55	□□□□□ -1.84
SIR2	YDL042C	SSO1	P32867	290 aa		3.55	□□□□□ -1.84
SIR2	YDL042C	PRM10	P42946	383 aa		3.55	□□□□□ -1.84
SIR2	YDL042C	HAM1	P47119	197 aa	Known RBP	3.55	□□□□□ -1.84
SIR2	YDL042C	PRP8	P33334	2413 aa	Known RBP	3.55	□□□□□ -1.84
SIR2	YDL042C	ADH3	P07246	375 aa	Known RBP	3.54	□□□□□ -1.84
SIR2	YDL042C	NHP6B	P11633	99 aa	Known RBP	3.54	□□□□□ -1.84
SIR2	YDL042C	SNF6	P18888	332 aa		3.54	□□□□□ -1.84
SIR2	YDL042C	PBN1	P25580	416 aa		3.54	□□□□□ -1.84
SIR2	YDL042C	ASF2	P32448	525 aa	Predicted RBP	3.54	□□□□□ -1.84
SIR2	YDL042C	CAF4	P36130	643 aa		3.54	□□□□□ -1.84
SIR2	YDL042C	SNX4	P47057	423 aa		3.54	□□□□□ -1.84
SIR2	YDL042C	TOS8	P53147	276 aa		3.54	□□□□□ -1.84
SIR2	YDL042C	NOP19	P53317	196 aa	Predicted RBP	3.54	□□□□□ -1.84
SIR2	YDL042C	YMR279C	Q03263	540 aa		3.54	□□□□□ -1.84
SIR2	YDL042C	YKL018C-A	Q3E7A7	99 aa		3.54	□□□□□ -1.84
SIR2	YDL042C	RIB1	P38066	345 aa		3.53	□□□□□ -1.84
SIR2	YDL042C	RTC3	P38804	111 aa	Predicted RBP	3.53	□□□□□ -1.84
SIR2	YDL042C	CGR1	P53188	120 aa		3.53	□□□□□ -1.84
SIR2	YDL042C	YGR026W	P53217	278 aa		3.53	□□□□□ -1.84
SIR2	YDL042C	NIP7	Q08962	181 aa	Known RBP	3.53	□□□□□ -1.84
SIR2	YDL042C	MEC1	P38111	2368 aa		3.53	□□□□□ -1.84
SIR2	YDL042C	SCO1	P23833	295 aa		3.52	□□□□□ -1.85
SIR2	YDL042C	STP22	P25604	385 aa		3.52	□□□□□ -1.85
SIR2	YDL042C	TAH1	P25638	111 aa	Predicted RBP	3.52	□□□□□ -1.85
SIR2	YDL042C	SUI1	P32911	108 aa	Known RBP	3.52	□□□□□ -1.85
SIR2	YDL042C	RPS27A	P35997	82 aa	Known RBP	3.52	□□□□□ -1.85
SIR2	YDL042C	RPS27B	P38711	82 aa		3.52	□□□□□ -1.85
SIR2	YDL042C	PEX17	P40155	199 aa		3.52	□□□□□ -1.85
SIR2	YDL042C	MIC26	P50087	233 aa		3.52	□□□□□ -1.85
SIR2	YDL042C	YNL010W	P53981	241 aa	Known RBP	3.52	□□□□□ -1.85
SIR2	YDL042C	FMN1	Q03778	218 aa		3.52	□□□□□ -1.85
SIR2	YDL042C	HEM25	Q07534	307 aa		3.52	□□□□□ -1.85
SIR2	YDL042C	JLP1	Q12358	412 aa		3.52	□□□□□ -1.85
SIR2	YDL042C	YOR020W-A	Q3E824	90 aa		3.52	□□□□□ -1.85
SIR2	YDL042C	ARG80	P07249	177 aa		3.52	□□□□□ -1.85
SIR2	YDL042C	PTC1	P35182	281 aa		3.52	□□□□□ -1.85
SIR2	YDL042C	YCR087C-A	P37263	153 aa		3.52	□□□□□ -1.85
SIR2	YDL042C	RPF1	P38805	295 aa	Known RBP	3.52	□□□□□ -1.85
SIR2	YDL042C	SMD3	P43321	101 aa	Known RBP	3.52	□□□□□ -1.85
SIR2	YDL042C	RPA43	P46669	326 aa		3.52	□□□□□ -1.85
SIR2	YDL042C	CUS2	P53830	285 aa	Predicted RBP	3.52	□□□□□ -1.85
SIR2	YDL042C	ATG39	Q06159	398 aa		3.52	□□□□□ -1.85
SIR2	YDL042C	TPO4	Q12256	659 aa		3.52	□□□□□ -1.85
SIR2	YDL042C	YNL140C	P53910	189 aa		3.51	□□□□□ -1.85
SIR2	YDL042C	FYV6	P53913	173 aa		3.51	□□□□□ -1.85
SIR2	YDL042C	MET31	Q03081	177 aa		3.51	□□□□□ -1.85
SIR2	YDL042C	SSQ1	Q05931	657 aa	Predicted RBP	3.51	□□□□□ -1.85
SIR2	YDL042C	AKR2	Q12013	749 aa		3.51	□□□□□ -1.85
SIR2	YDL042C	CYR1	P08678	2026 aa	Known RBP	3.51	□□□□□ -1.85
SIR2	YDL042C	FAS1	P07149	2051 aa	Known RBP	3.51	□□□□□ -1.85
SIR2	YDL042C	YHR139C-A	O13536	103 aa		3.5	□□□□□ -1.85
SIR2	YDL042C	YBR121C-A	P0C5L4	52 aa		3.5	□□□□□ -1.85
SIR2	YDL042C	URA6	P15700	204 aa		3.5	□□□□□ -1.85
SIR2	YDL042C	VMA11	P32842	164 aa		3.5	□□□□□ -1.85
SIR2	YDL042C	AYR1	P40471	297 aa		3.5	□□□□□ -1.85
SIR2	YDL042C	ALG13	P53178	202 aa		3.5	□□□□□ -1.85
SIR2	YDL042C	ERV29	P53337	310 aa		3.5	□□□□□ -1.85
SIR2	YDL042C	EMC6	Q12431	108 aa		3.5	□□□□□ -1.85
SIR2	YDL042C	KSS1	P14681	368 aa		3.49	□□□□□ -1.85
SIR2	YDL042C	FCY2	P17064	533 aa		3.49	□□□□□ -1.85
SIR2	YDL042C	ECM4	P36156	370 aa		3.49	□□□□□ -1.85
SIR2	YDL042C	CTR2	P38865	189 aa		3.49	□□□□□ -1.85
SIR2	YDL042C	ICE2	P40499	491 aa		3.49	□□□□□ -1.85
SIR2	YDL042C	YIL001W	P40560	513 aa		3.49	□□□□□ -1.85
SIR2	YDL042C	MNN5	P46982	586 aa		3.49	□□□□□ -1.85
SIR2	YDL042C	YJR056C	P47115	236 aa		3.49	□□□□□ -1.85
SIR2	YDL042C	ABF2	Q02486	183 aa		3.49	□□□□□ -1.85
SIR2	YDL042C	YOL024W	Q08172	172 aa		3.49	□□□□□ -1.85
SIR2	YDL042C	YOL131W	Q08270	108 aa		3.49	□□□□□ -1.85
SIR2	YDL042C	GET4	Q12125	312 aa		3.49	□□□□□ -1.85
SIR2	YDL042C	YKL183C-A	Q3E765	70 aa		3.49	□□□□□ -1.85
SIR2	YDL042C	RPC19	P28000	142 aa	Known RBP	3.49	□□□□□ -1.85
SIR2	YDL042C	YAR068W	P39564	161 aa		3.49	□□□□□ -1.85
SIR2	YDL042C	ERG28	P40030	148 aa		3.49	□□□□□ -1.85
SIR2	YDL042C	FMP32	P43557	207 aa		3.49	□□□□□ -1.85
SIR2	YDL042C	CGI121	Q03705	181 aa	Known RBP	3.49	□□□□□ -1.85
SIR2	YDL042C	SLH1	P53327	1967 aa	Known RBP	3.48	□□□□□ -1.85
SIR2	YDL042C	STE18	P18852	110 aa		3.48	□□□□□ -1.85
SIR2	YDL042C	SEC17	P32602	292 aa		3.48	□□□□□ -1.85
SIR2	YDL042C	SRY1	P36007	326 aa		3.48	□□□□□ -1.85
SIR2	YDL042C	YPR174C	Q06616	221 aa	Predicted RBP	3.48	□□□□□ -1.85
SIR2	YDL042C	DCN1	Q12395	269 aa		3.48	□□□□□ -1.85
SIR2	YDL042C	RPL28	P02406	149 aa	Known RBP	3.47	□□□□□ -1.85
SIR2	YDL042C	CBT1	P36038	271 aa	Predicted RBP	3.47	□□□□□ -1.85
SIR2	YDL042C	YML108W	Q03759	105 aa		3.47	□□□□□ -1.85
SIR2	YDL042C	RAS2	P01120	322 aa	Known RBP	3.46	□□□□□ -1.85
SIR2	YDL042C	PUT1	P09368	476 aa		3.46	□□□□□ -1.85
SIR2	YDL042C	MRPL17	P36528	281 aa		3.46	□□□□□ -1.85
SIR2	YDL042C	YBR063C	P38083	404 aa		3.46	□□□□□ -1.85

Retrieved 100 of 5,963 RNA–protein pairs in 102 ms