RNA–Protein interactions for RNA: YCL020W

YCL020W, Transcript of Retrotransposon TYA Gag gene co-transcribed with TYB Pol, yeast

Gene YCL020W, Length 1,317 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YCL020W	YCL020W	YFH7	P43591	353 aa		0.89	□□□□□ -2.27
YCL020W	YCL020W	GET1	P53192	235 aa		0.89	□□□□□ -2.27
YCL020W	YCL020W	MRPS17	Q03246	237 aa	Predicted RBP	0.89	□□□□□ -2.27
YCL020W	YCL020W	YMR252C	Q04814	134 aa		0.89	□□□□□ -2.27
YCL020W	YCL020W	RNH202	Q05635	350 aa		0.89	□□□□□ -2.27
YCL020W	YCL020W	YOL014W	Q08110	124 aa		0.89	□□□□□ -2.27
YCL020W	YCL020W	IRC23	Q08416	157 aa		0.89	□□□□□ -2.27
YCL020W	YCL020W	ODC2	Q99297	307 aa		0.89	□□□□□ -2.27
YCL020W	YCL020W	QCR7	P00128	127 aa		0.88	□□□□□ -2.27
YCL020W	YCL020W	YEA4	P40004	342 aa		0.88	□□□□□ -2.27
YCL020W	YCL020W	RPL37B	P51402	88 aa	Known RBP	0.88	□□□□□ -2.27
YCL020W	YCL020W	NOP19	P53317	196 aa	Predicted RBP	0.88	□□□□□ -2.27
YCL020W	YCL020W	CWC27	Q02770	301 aa		0.88	□□□□□ -2.27
YCL020W	YCL020W	YMR226C	Q05016	267 aa	Known RBP	0.88	□□□□□ -2.27
YCL020W	YCL020W	ASF2	P32448	525 aa	Predicted RBP	0.87	□□□□□ -2.27
YCL020W	YCL020W	FMP23	P38231	175 aa		0.87	□□□□□ -2.27
YCL020W	YCL020W	EDC3	P39998	551 aa	Known RBP	0.87	□□□□□ -2.27
YCL020W	YCL020W	RFC4	P40339	323 aa	Known RBP	0.87	□□□□□ -2.27
YCL020W	YCL020W	SKI6	P46948	246 aa	Predicted RBP	0.87	□□□□□ -2.27
YCL020W	YCL020W	GET4	Q12125	312 aa		0.87	□□□□□ -2.27
YCL020W	YCL020W	MBF1	O14467	151 aa	Known RBP	0.86	□□□□□ -2.27
YCL020W	YCL020W	COX8	P04039	78 aa		0.86	□□□□□ -2.27
YCL020W	YCL020W	YCR090C	P25654	182 aa	Known RBP	0.86	□□□□□ -2.27
YCL020W	YCL020W	YHL042W	P38729	150 aa		0.86	□□□□□ -2.27
YCL020W	YCL020W	SER2	P42941	309 aa		0.86	□□□□□ -2.27
YCL020W	YCL020W	ARP3	P47117	449 aa	Known RBP	0.86	□□□□□ -2.27
YCL020W	YCL020W	UBC12	P52491	188 aa		0.86	□□□□□ -2.27
YCL020W	YCL020W	MRS1	P07266	363 aa		0.85	□□□□□ -2.27
YCL020W	YCL020W	MATALPHA2	P0CY08	210 aa		0.85	□□□□□ -2.27
YCL020W	YCL020W	HMLALPHA2	P0CY09	210 aa		0.85	□□□□□ -2.27
YCL020W	YCL020W	PHO85	P17157	305 aa		0.85	□□□□□ -2.27
YCL020W	YCL020W	YPK2	P18961	677 aa		0.85	□□□□□ -2.27
YCL020W	YCL020W	ADE1	P27616	306 aa		0.85	□□□□□ -2.27
YCL020W	YCL020W	YJR111C	P47148	283 aa	Known RBP	0.85	□□□□□ -2.27
YCL020W	YCL020W	CGR1	P53188	120 aa		0.85	□□□□□ -2.27
YCL020W	YCL020W	ARO80	Q04052	950 aa		0.85	□□□□□ -2.27
YCL020W	YCL020W	YPR013C	Q12145	317 aa		0.85	□□□□□ -2.27
YCL020W	YCL020W	PAM17	P36147	197 aa		0.84	□□□□□ -2.28
YCL020W	YCL020W	MMS2	P53152	137 aa		0.84	□□□□□ -2.28
YCL020W	YCL020W	YNL184C	P53876	108 aa		0.84	□□□□□ -2.28
YCL020W	YCL020W	DYN3	Q04949	312 aa		0.84	□□□□□ -2.28
YCL020W	YCL020W	PRP11	Q07350	266 aa	Predicted RBP	0.84	□□□□□ -2.28
YCL020W	YCL020W	YAR023C	D6VPM8	179 aa		0.83	□□□□□ -2.28
YCL020W	YCL020W	YER188C-A	P0C0V2	99 aa		0.83	□□□□□ -2.28
YCL020W	YCL020W	YLR460C	P54007	376 aa		0.83	□□□□□ -2.28
YCL020W	YCL020W	YMR315W	Q04869	349 aa	Known RBP	0.83	□□□□□ -2.28
YCL020W	YCL020W	YML100W-A	Q8TGT0	57 aa		0.83	□□□□□ -2.28
YCL020W	YCL020W	YLR422W	Q06409	1932 aa		0.82	□□□□□ -2.28
YCL020W	YCL020W	APA2	P22108	325 aa		0.82	□□□□□ -2.28
YCL020W	YCL020W	YER134C	P40081	178 aa		0.82	□□□□□ -2.28
YCL020W	YCL020W	TDA4	P47153	279 aa		0.82	□□□□□ -2.28
YCL020W	YCL020W	NAT3	Q06504	195 aa		0.82	□□□□□ -2.28
YCL020W	YCL020W	SNF4	P12904	322 aa		0.81	□□□□□ -2.28
YCL020W	YCL020W	RTC4	P53850	401 aa		0.81	□□□□□ -2.28
YCL020W	YCL020W	DAD4	P69851	72 aa		0.81	□□□□□ -2.28
YCL020W	YCL020W	DIG2	Q03373	323 aa	Known RBP	0.81	□□□□□ -2.28
YCL020W	YCL020W	YMR007W	Q03675	126 aa		0.81	□□□□□ -2.28
YCL020W	YCL020W	FUS2	Q05670	677 aa		0.81	□□□□□ -2.28
YCL020W	YCL020W	COA3	Q3E7B2	85 aa		0.81	□□□□□ -2.28
YCL020W	YCL020W	AIM2	P39721	246 aa		0.8	□□□□□ -2.28
YCL020W	YCL020W	YFL019C	P43576	117 aa		0.8	□□□□□ -2.28
YCL020W	YCL020W	THG1	P53215	237 aa	Known RBP	0.8	□□□□□ -2.28
YCL020W	YCL020W	YNL033W	P53964	284 aa		0.8	□□□□□ -2.28
YCL020W	YCL020W	YMR295C	Q03559	197 aa		0.8	□□□□□ -2.28
YCL020W	YCL020W	YLR031W	Q07978	186 aa		0.8	□□□□□ -2.28
YCL020W	YCL020W	YDL085C-A	Q3E7B7	68 aa	Known RBP	0.8	□□□□□ -2.28
YCL020W	YCL020W	IGO2	Q9P305	131 aa		0.8	□□□□□ -2.28
YCL020W	YCL020W	DUR1,2	P32528	1835 aa	Known RBP	0.79	□□□□□ -2.28
YCL020W	YCL020W	TIR1	P10863	254 aa		0.79	□□□□□ -2.28
YCL020W	YCL020W	MGT1	P26188	188 aa		0.79	□□□□□ -2.28
YCL020W	YCL020W	RPB7	P34087	171 aa		0.79	□□□□□ -2.28
YCL020W	YCL020W	CLG1	P35190	452 aa		0.79	□□□□□ -2.28
YCL020W	YCL020W	SHG1	P38337	142 aa		0.79	□□□□□ -2.28
YCL020W	YCL020W	MTW1	P39731	289 aa		0.79	□□□□□ -2.28
YCL020W	YCL020W	HPA3	P39979	161 aa		0.79	□□□□□ -2.28
YCL020W	YCL020W	PDS1	P40316	373 aa	Predicted RBP	0.79	□□□□□ -2.28
YCL020W	YCL020W	PGA1	P53896	198 aa		0.79	□□□□□ -2.28
YCL020W	YCL020W	NRK1	P53915	240 aa		0.79	□□□□□ -2.28
YCL020W	YCL020W	NOC4	Q06512	552 aa	Predicted RBP	0.79	□□□□□ -2.28
YCL020W	YCL020W	YOL024W	Q08172	172 aa		0.79	□□□□□ -2.28
YCL020W	YCL020W	FYV12	Q08559	129 aa		0.79	□□□□□ -2.28
YCL020W	YCL020W	PST2	Q12335	198 aa	Known RBP	0.79	□□□□□ -2.28
YCL020W	YCL020W	RAD9	P14737	1309 aa		0.79	□□□□□ -2.28
YCL020W	YCL020W	TAH1	P25638	111 aa	Predicted RBP	0.78	□□□□□ -2.28
YCL020W	YCL020W	YKR041W	P36134	250 aa		0.78	□□□□□ -2.28
YCL020W	YCL020W	JAC1	P53193	184 aa		0.78	□□□□□ -2.28
YCL020W	YCL020W	SHH3	Q04487	196 aa		0.78	□□□□□ -2.28
YCL020W	YCL020W	YMR253C	Q04835	414 aa		0.78	□□□□□ -2.28
YCL020W	YCL020W	GRX8	Q05926	109 aa		0.78	□□□□□ -2.28
YCL020W	YCL020W	YLR036C	Q07986	203 aa		0.78	□□□□□ -2.28
YCL020W	YCL020W	YLR412C-A	Q3E742	68 aa		0.78	□□□□□ -2.28
YCL020W	YCL020W	IDP1	P21954	428 aa	Known RBP	0.77	□□□□□ -2.29
YCL020W	YCL020W	AHC2	P25649	128 aa		0.77	□□□□□ -2.29
YCL020W	YCL020W	ARO7	P32178	256 aa		0.77	□□□□□ -2.29
YCL020W	YCL020W	MAK5	P38112	773 aa	Predicted RBP	0.77	□□□□□ -2.29
YCL020W	YCL020W	SPC25	P40014	221 aa		0.77	□□□□□ -2.29
YCL020W	YCL020W	FMP32	P43557	207 aa		0.77	□□□□□ -2.29
YCL020W	YCL020W	TMA22	P47089	198 aa	Predicted RBP	0.77	□□□□□ -2.29
YCL020W	YCL020W	SNO1	Q03144	224 aa		0.77	□□□□□ -2.29
YCL020W	YCL020W	VPS71	Q03433	280 aa		0.77	□□□□□ -2.29

Retrieved 100 of 5,963 RNA–protein pairs in 286.2 ms