RNA–Protein interactions for RNA: ENST00000641947.1

PHGDH-232, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,774 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-232ENST00000641947 IGFBP6P24592 240 aaPredicted RBP18.77■□□□□ 0.6
PHGDH-232ENST00000641947 RAD23BP54727 409 aa18.77■□□□□ 0.6
PHGDH-232ENST00000641947 C1QTNF8P60827 252 aa18.77■□□□□ 0.6
PHGDH-232ENST00000641947 PAPD7Q5XG87 772 aaKnown RBP18.77■□□□□ 0.6
PHGDH-232ENST00000641947 MRPL10Q7Z7H8 261 aaKnown RBP18.77■□□□□ 0.6
PHGDH-232ENST00000641947 TPCN2Q8NHX9 752 aa18.77■□□□□ 0.6
PHGDH-232ENST00000641947 SLC35G2Q8TBE7 412 aa18.77■□□□□ 0.6
PHGDH-232ENST00000641947 CPA5Q8WXQ8 436 aa18.77■□□□□ 0.6
PHGDH-232ENST00000641947 CTNNBL1Q8WYA6 563 aaPredicted RBP18.77■□□□□ 0.6
PHGDH-232ENST00000641947 RFFLQ8WZ73 363 aa18.77■□□□□ 0.6
PHGDH-232ENST00000641947 TSC1Q92574 1164 aa18.77■□□□□ 0.6
PHGDH-232ENST00000641947 GAD1Q99259 594 aa18.77■□□□□ 0.6
PHGDH-232ENST00000641947 CACNG4Q9UBN1 327 aa18.77■□□□□ 0.6
PHGDH-232ENST00000641947 NME7Q9Y5B8 376 aa18.77■□□□□ 0.6
PHGDH-232ENST00000641947 SPTLC1O15269 473 aa18.76■□□□□ 0.59
PHGDH-232ENST00000641947 SRGAP2O75044 1071 aa18.76■□□□□ 0.59
PHGDH-232ENST00000641947 CD4P01730 458 aa18.76■□□□□ 0.59
PHGDH-232ENST00000641947 ITGA4P13612 1032 aa18.76■□□□□ 0.59
PHGDH-232ENST00000641947 ZSCAN20P17040 1043 aaPredicted RBP18.76■□□□□ 0.59
PHGDH-232ENST00000641947 TERF1P54274 439 aa18.76■□□□□ 0.59
PHGDH-232ENST00000641947 NOMO3P69849 1222 aa18.76■□□□□ 0.59
PHGDH-232ENST00000641947 NAA35Q5VZE5 725 aa18.76■□□□□ 0.59
PHGDH-232ENST00000641947 ACAD10Q6JQN1 1059 aa18.76■□□□□ 0.59
PHGDH-232ENST00000641947 LRRC52Q8N7C0 313 aa18.76■□□□□ 0.59
PHGDH-232ENST00000641947 SLC4A11Q8NBS3 891 aa18.76■□□□□ 0.59
PHGDH-232ENST00000641947 LINC01599Q8WXQ3 324 aa18.76■□□□□ 0.59
PHGDH-232ENST00000641947 ALS2CR12Q96Q35 445 aa18.76■□□□□ 0.59
PHGDH-232ENST00000641947 ADAM2Q99965 735 aa18.76■□□□□ 0.59
PHGDH-232ENST00000641947 TRAIPQ9BWF2 469 aa18.76■□□□□ 0.59
PHGDH-232ENST00000641947 TLR10Q9BXR5 811 aa18.76■□□□□ 0.59
PHGDH-232ENST00000641947 PUF60Q9UHX1 559 aaKnown RBP18.76■□□□□ 0.59
PHGDH-232ENST00000641947 SQORQ9Y6N5 450 aa18.76■□□□□ 0.59
PHGDH-232ENST00000641947 FTCDO95954 541 aa18.76■□□□□ 0.59
PHGDH-232ENST00000641947 GTF2F1P35269 517 aaKnown RBP eCLIP18.76■□□□□ 0.59
PHGDH-232ENST00000641947 NOP2P46087 812 aaKnown RBP18.76■□□□□ 0.59
PHGDH-232ENST00000641947 CENPCQ03188 943 aa18.76■□□□□ 0.59
PHGDH-232ENST00000641947 INCA1Q0VD86 236 aa18.76■□□□□ 0.59
PHGDH-232ENST00000641947 GPNMBQ14956 572 aa18.76■□□□□ 0.59
PHGDH-232ENST00000641947 C2CD6Q53TS8 623 aa18.76■□□□□ 0.59
PHGDH-232ENST00000641947 RTN4RL1Q86UN2 441 aaPredicted RBP18.76■□□□□ 0.59
PHGDH-232ENST00000641947 CYP3A43Q9HB55 503 aa18.76■□□□□ 0.59
PHGDH-232ENST00000641947 CDC23Q9UJX2 597 aa18.76■□□□□ 0.59
PHGDH-232ENST00000641947 JRKLQ9Y4A0 524 aa18.76■□□□□ 0.59
PHGDH-232ENST00000641947 TSC2P49815 1807 aa18.75■□□□□ 0.59
PHGDH-232ENST00000641947 ARL5CA6NH57 179 aa18.75■□□□□ 0.59
PHGDH-232ENST00000641947 ZNF623O75123 536 aa18.75■□□□□ 0.59
PHGDH-232ENST00000641947 YWHAEP62258 255 aaKnown RBP18.75■□□□□ 0.59
PHGDH-232ENST00000641947 TNNC1P63316 161 aa18.75■□□□□ 0.59
PHGDH-232ENST00000641947 MYO1EQ12965 1108 aa18.75■□□□□ 0.59
PHGDH-232ENST00000641947 PTPROQ16827 1216 aa18.75■□□□□ 0.59
PHGDH-232ENST00000641947 LLGL2Q6P1M3 1020 aa18.75■□□□□ 0.59
PHGDH-232ENST00000641947 MMS19Q96T76 1030 aa18.75■□□□□ 0.59
PHGDH-232ENST00000641947 MRPL45Q9BRJ2 306 aaKnown RBP18.75■□□□□ 0.59
PHGDH-232ENST00000641947 CARD6Q9BX69 1037 aa18.75■□□□□ 0.59
PHGDH-232ENST00000641947 PACSIN2Q9UNF0 486 aaPredicted RBP18.75■□□□□ 0.59
PHGDH-232ENST00000641947 SNX9Q9Y5X1 595 aa18.75■□□□□ 0.59
PHGDH-232ENST00000641947 A0A0U1RQF3 1178 aa18.74■□□□□ 0.59
PHGDH-232ENST00000641947 TLR3O15455 904 aaKnown RBP18.74■□□□□ 0.59
PHGDH-232ENST00000641947 SLU7O95391 586 aaKnown RBP18.74■□□□□ 0.59
PHGDH-232ENST00000641947 P4HA1P13674 534 aa18.74■□□□□ 0.59
PHGDH-232ENST00000641947 CYP3A5P20815 502 aa18.74■□□□□ 0.59
PHGDH-232ENST00000641947 IBSPP21815 317 aaPredicted RBP18.74■□□□□ 0.59
PHGDH-232ENST00000641947 GPC5P78333 572 aa18.74■□□□□ 0.59
PHGDH-232ENST00000641947 NAA30Q147X3 362 aaPredicted RBP18.74■□□□□ 0.59
PHGDH-232ENST00000641947 USP38Q8NB14 1042 aa18.74■□□□□ 0.59
PHGDH-232ENST00000641947 TSPAN18Q96SJ8 248 aa18.74■□□□□ 0.59
PHGDH-232ENST00000641947 CTIFO43310 598 aaKnown RBP18.73■□□□□ 0.59
PHGDH-232ENST00000641947 LRPAP1P30533 357 aa18.73■□□□□ 0.59
PHGDH-232ENST00000641947 SCNN1GP51170 649 aa18.73■□□□□ 0.59
PHGDH-232ENST00000641947 NDST1P52848 882 aa18.73■□□□□ 0.59
PHGDH-232ENST00000641947 MEI1Q5TIA1 1274 aa18.73■□□□□ 0.59
PHGDH-232ENST00000641947 MON1BQ7L1V2 547 aa18.73■□□□□ 0.59
PHGDH-232ENST00000641947 LRRC8DQ7L1W4 858 aa18.73■□□□□ 0.59
PHGDH-232ENST00000641947 SLFN11Q7Z7L1 901 aa18.73■□□□□ 0.59
PHGDH-232ENST00000641947 ZNF598Q86UK7 904 aaKnown RBP18.73■□□□□ 0.59
PHGDH-232ENST00000641947 MCOLN2Q8IZK6 566 aa18.73■□□□□ 0.59
PHGDH-232ENST00000641947 WDTC1Q8N5D0 677 aa18.73■□□□□ 0.59
PHGDH-232ENST00000641947 RNF169Q8NCN4 708 aa18.73■□□□□ 0.59
PHGDH-232ENST00000641947 CAGE1Q8TC20 777 aa18.73■□□□□ 0.59
PHGDH-232ENST00000641947 ZNF653Q96CK0 615 aa18.73■□□□□ 0.59
PHGDH-232ENST00000641947 CRISPLD2Q9H0B8 497 aa18.73■□□□□ 0.59
PHGDH-232ENST00000641947 SNX12Q9UMY4 172 aa18.73■□□□□ 0.59
PHGDH-232ENST00000641947 GIT1Q9Y2X7 761 aa18.73■□□□□ 0.59
PHGDH-232ENST00000641947 ZNF185O15231 689 aa18.73■□□□□ 0.59
PHGDH-232ENST00000641947 HCRTO43612 131 aa18.73■□□□□ 0.59
PHGDH-232ENST00000641947 BUB1BO60566 1050 aaPredicted RBP18.73■□□□□ 0.59
PHGDH-232ENST00000641947 NBNO60934 754 aa18.73■□□□□ 0.59
PHGDH-232ENST00000641947 CYP1A2P05177 515 aa18.73■□□□□ 0.59
PHGDH-232ENST00000641947 HSPA8P11142 646 aaKnown RBP18.73■□□□□ 0.59
PHGDH-232ENST00000641947 RAB27AP51159 221 aa18.73■□□□□ 0.59
PHGDH-232ENST00000641947 ATN1P54259 1190 aaPredicted RBP18.73■□□□□ 0.59
PHGDH-232ENST00000641947 PTP4A2Q12974 167 aa18.73■□□□□ 0.59
PHGDH-232ENST00000641947 TCEAL1Q15170 157 aa18.73■□□□□ 0.59
PHGDH-232ENST00000641947 SOWAHAQ2M3V2 549 aa18.73■□□□□ 0.59
PHGDH-232ENST00000641947 TRIM72Q6ZMU5 477 aa18.73■□□□□ 0.59
PHGDH-232ENST00000641947 ZNF333Q96JL9 665 aa18.73■□□□□ 0.59
PHGDH-232ENST00000641947 PDCL3Q9H2J4 239 aa18.73■□□□□ 0.59
PHGDH-232ENST00000641947 GTF3C4Q9UKN8 822 aa18.73■□□□□ 0.59
PHGDH-232ENST00000641947 BARX2Q9UMQ3 279 aaPredicted RBP18.73■□□□□ 0.59
PHGDH-232ENST00000641947 PCDHGC3Q9UN70 934 aa18.73■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 75.1 ms