RNA–Protein interactions for RNA: ENST00000641891.1

PHGDH-229, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,175 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-229ENST00000641891 EVPLQ92817 2033 aa18.02■□□□□ 0.48
PHGDH-229ENST00000641891 GPR25O00155 361 aa18.01■□□□□ 0.47
PHGDH-229ENST00000641891 MEFVO15553 781 aaPredicted RBP18.01■□□□□ 0.47
PHGDH-229ENST00000641891 INSRRP14616 1297 aa18.01■□□□□ 0.47
PHGDH-229ENST00000641891 MDH1P40925 334 aaKnown RBP18.01■□□□□ 0.47
PHGDH-229ENST00000641891 SLC26A2P50443 739 aa18.01■□□□□ 0.47
PHGDH-229ENST00000641891 ZNF252P-AS1Q0IIN9 211 aa18.01■□□□□ 0.47
PHGDH-229ENST00000641891 ATP13A4Q4VNC1 1196 aa18.01■□□□□ 0.47
PHGDH-229ENST00000641891 SPDYCQ5MJ68 293 aa18.01■□□□□ 0.47
PHGDH-229ENST00000641891 AGBL2Q5U5Z8 902 aa18.01■□□□□ 0.47
PHGDH-229ENST00000641891 GADD45GIP1Q8TAE8 222 aaPredicted RBP18.01■□□□□ 0.47
PHGDH-229ENST00000641891 JPH2Q9BR39 696 aaPredicted RBP18.01■□□□□ 0.47
PHGDH-229ENST00000641891 MTRF1LQ9UGC7 380 aaKnown RBP18.01■□□□□ 0.47
PHGDH-229ENST00000641891 PARP2Q9UGN5 583 aa18.01■□□□□ 0.47
PHGDH-229ENST00000641891 ANKRD65E5RJM6 399 aa18.01■□□□□ 0.47
PHGDH-229ENST00000641891 TP73O15350 636 aa18.01■□□□□ 0.47
PHGDH-229ENST00000641891 PSTPIP1O43586 416 aa18.01■□□□□ 0.47
PHGDH-229ENST00000641891 CAND2O75155 1236 aa18.01■□□□□ 0.47
PHGDH-229ENST00000641891 TNNC2P02585 160 aa18.01■□□□□ 0.47
PHGDH-229ENST00000641891 LGALS2P05162 132 aa18.01■□□□□ 0.47
PHGDH-229ENST00000641891 NFICP08651 508 aa18.01■□□□□ 0.47
PHGDH-229ENST00000641891 KRT19P08727 400 aa18.01■□□□□ 0.47
PHGDH-229ENST00000641891 ZNF286BP0CG31 522 aa18.01■□□□□ 0.47
PHGDH-229ENST00000641891 MAGOHP61326 146 aaKnown RBP18.01■□□□□ 0.47
PHGDH-229ENST00000641891 MKRN3Q13064 507 aaKnown RBP18.01■□□□□ 0.47
PHGDH-229ENST00000641891 SNAPC2Q13487 334 aa18.01■□□□□ 0.47
PHGDH-229ENST00000641891 SLC29A2Q14542 456 aa18.01■□□□□ 0.47
PHGDH-229ENST00000641891 DENND2CQ68D51 928 aa18.01■□□□□ 0.47
PHGDH-229ENST00000641891 TAPT1Q6NXT6 567 aa18.01■□□□□ 0.47
PHGDH-229ENST00000641891 WDTC1Q8N5D0 677 aa18.01■□□□□ 0.47
PHGDH-229ENST00000641891 MCEEQ96PE7 176 aa18.01■□□□□ 0.47
PHGDH-229ENST00000641891 IFT122Q9HBG6 1241 aa18.01■□□□□ 0.47
PHGDH-229ENST00000641891 ERAP1Q9NZ08 941 aa18.01■□□□□ 0.47
PHGDH-229ENST00000641891 RRP15Q9Y3B9 282 aaKnown RBP18.01■□□□□ 0.47
PHGDH-229ENST00000641891 ASB14A6NK59 587 aa18■□□□□ 0.47
PHGDH-229ENST00000641891 PI4K2BG5E9Z4 385 aa18■□□□□ 0.47
PHGDH-229ENST00000641891 NUDT17P0C025 328 aa18■□□□□ 0.47
PHGDH-229ENST00000641891 OGDHQ02218 1023 aa18■□□□□ 0.47
PHGDH-229ENST00000641891 KLF1Q13351 362 aaPredicted RBP18■□□□□ 0.47
PHGDH-229ENST00000641891 ORC1Q13415 861 aa18■□□□□ 0.47
PHGDH-229ENST00000641891 SURF1Q15526 300 aa18■□□□□ 0.47
PHGDH-229ENST00000641891 CYP4A22Q5TCH4 519 aa18■□□□□ 0.47
PHGDH-229ENST00000641891 MAMDC4Q6UXC1 1216 aa18■□□□□ 0.47
PHGDH-229ENST00000641891 SRLQ86TD4 932 aa18■□□□□ 0.47
PHGDH-229ENST00000641891 CCDC25Q86WR0 208 aa18■□□□□ 0.47
PHGDH-229ENST00000641891 SLCO2A1Q92959 643 aa18■□□□□ 0.47
PHGDH-229ENST00000641891 ANKRD36BP1Q96IX9 119 aa18■□□□□ 0.47
PHGDH-229ENST00000641891 L3MBTL3Q96JM7 780 aaPredicted RBP18■□□□□ 0.47
PHGDH-229ENST00000641891 CCDC114Q96M63 670 aa18■□□□□ 0.47
PHGDH-229ENST00000641891 SYT17Q9BSW7 474 aa18■□□□□ 0.47
PHGDH-229ENST00000641891 ASIC3Q9UHC3 531 aa18■□□□□ 0.47
PHGDH-229ENST00000641891 SIX4Q9UIU6 781 aa18■□□□□ 0.47
PHGDH-229ENST00000641891 TCRBV5S1A1TA0A578 114 aa18■□□□□ 0.47
PHGDH-229ENST00000641891 SMIM23A6NLE4 172 aa18■□□□□ 0.47
PHGDH-229ENST00000641891 B4GALT4O60513 344 aa18■□□□□ 0.47
PHGDH-229ENST00000641891 TMOD1P28289 359 aa18■□□□□ 0.47
PHGDH-229ENST00000641891 GBP1P32455 592 aa18■□□□□ 0.47
PHGDH-229ENST00000641891 ODF2Q5BJF6 829 aa18■□□□□ 0.47
PHGDH-229ENST00000641891 LDLRAD1Q5T700 205 aa18■□□□□ 0.47
PHGDH-229ENST00000641891 DPY19L2Q6NUT2 758 aa18■□□□□ 0.47
PHGDH-229ENST00000641891 KATNAL2Q8IYT4 538 aa18■□□□□ 0.47
PHGDH-229ENST00000641891 SHCBP1Q8NEM2 672 aa18■□□□□ 0.47
PHGDH-229ENST00000641891 ZC3H15Q8WU90 426 aaKnown RBP18■□□□□ 0.47
PHGDH-229ENST00000641891 CPB2Q96IY4 423 aa18■□□□□ 0.47
PHGDH-229ENST00000641891 ZNF408Q9H9D4 720 aa18■□□□□ 0.47
PHGDH-229ENST00000641891 RPF1Q9H9Y2 349 aaKnown RBP18■□□□□ 0.47
PHGDH-229ENST00000641891 TNFSF13BQ9Y275 285 aa18■□□□□ 0.47
PHGDH-229ENST00000641891 A0A087WZ62 844 aa17.99■□□□□ 0.47
PHGDH-229ENST00000641891 TMEM191CA6NGB0 347 aa17.99■□□□□ 0.47
PHGDH-229ENST00000641891 VTNP04004 478 aa17.99■□□□□ 0.47
PHGDH-229ENST00000641891 ADORA2AP29274 412 aa17.99■□□□□ 0.47
PHGDH-229ENST00000641891 VPS41P49754 854 aa17.99■□□□□ 0.47
PHGDH-229ENST00000641891 SEC24CP53992 1094 aa17.99■□□□□ 0.47
PHGDH-229ENST00000641891 CDH8P55286 799 aa17.99■□□□□ 0.47
PHGDH-229ENST00000641891 EIF3BP55884 814 aaKnown RBP17.99■□□□□ 0.47
PHGDH-229ENST00000641891 PTGISQ16647 500 aa17.99■□□□□ 0.47
PHGDH-229ENST00000641891 ZNF792Q3KQV3 632 aa17.99■□□□□ 0.47
PHGDH-229ENST00000641891 DENND1BQ6P3S1 775 aa17.99■□□□□ 0.47
PHGDH-229ENST00000641891 FDXACB1Q9BRP7 624 aaPredicted RBP17.99■□□□□ 0.47
PHGDH-229ENST00000641891 OSBPL8Q9BZF1 889 aa17.99■□□□□ 0.47
PHGDH-229ENST00000641891 TJP2Q9UDY2 1190 aa17.99■□□□□ 0.47
PHGDH-229ENST00000641891 SLC12A6Q9UHW9 1150 aa17.99■□□□□ 0.47
PHGDH-229ENST00000641891 LACTBL1A8MY62 500 aa17.98■□□□□ 0.47
PHGDH-229ENST00000641891 F8VP50 259 aa17.98■□□□□ 0.47
PHGDH-229ENST00000641891 LSM8O95777 96 aaKnown RBP17.98■□□□□ 0.47
PHGDH-229ENST00000641891 CHKAP35790 457 aa17.98■□□□□ 0.47
PHGDH-229ENST00000641891 ADCY2Q08462 1091 aa17.98■□□□□ 0.47
PHGDH-229ENST00000641891 DNAJC24Q6P3W2 148 aa17.98■□□□□ 0.47
PHGDH-229ENST00000641891 C1orf127Q8N9H9 656 aa17.98■□□□□ 0.47
PHGDH-229ENST00000641891 TMEM35BQ8NCS4 154 aa17.98■□□□□ 0.47
PHGDH-229ENST00000641891 AFG1LQ8WV93 481 aa17.98■□□□□ 0.47
PHGDH-229ENST00000641891 MAIP1Q8WWC4 291 aa17.98■□□□□ 0.47
PHGDH-229ENST00000641891 ACSF2Q96CM8 615 aaPredicted RBP17.98■□□□□ 0.47
PHGDH-229ENST00000641891 SLC10A4Q96EP9 437 aa17.98■□□□□ 0.47
PHGDH-229ENST00000641891 SDCBP2Q9H190 292 aa17.98■□□□□ 0.47
PHGDH-229ENST00000641891 AAASQ9NRG9 546 aa17.98■□□□□ 0.47
PHGDH-229ENST00000641891 IP6K2Q9UHH9 426 aa17.98■□□□□ 0.47
PHGDH-229ENST00000641891 PLXNA1Q9UIW2 1896 aa17.98■□□□□ 0.47
PHGDH-229ENST00000641891 C11orf97A0A1B0GVM6 126 aaPredicted RBP17.98■□□□□ 0.47
PHGDH-229ENST00000641891 TLDC2A0PJX2 215 aa17.98■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms