RNA–Protein interactions for RNA: ENST00000641811.1

PHGDH-227, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,031 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-227ENST00000641811 TMEM209Q96SK2 561 aa18.67■□□□□ 0.58
PHGDH-227ENST00000641811 CGRRF1Q99675 332 aa18.67■□□□□ 0.58
PHGDH-227ENST00000641811 EPHX3Q9H6B9 360 aa18.67■□□□□ 0.58
PHGDH-227ENST00000641811 PIDD1Q9HB75 910 aa18.67■□□□□ 0.58
PHGDH-227ENST00000641811 KINO60870 393 aaKnown RBP18.66■□□□□ 0.58
PHGDH-227ENST00000641811 KIF20AO95235 890 aa18.66■□□□□ 0.58
PHGDH-227ENST00000641811 PAPLNO95428 1278 aa18.66■□□□□ 0.58
PHGDH-227ENST00000641811 CYP11A1P05108 521 aa18.66■□□□□ 0.58
PHGDH-227ENST00000641811 CPB1P15086 417 aa18.66■□□□□ 0.58
PHGDH-227ENST00000641811 TNNI1P19237 187 aa18.66■□□□□ 0.58
PHGDH-227ENST00000641811 CDR1P51861 262 aa18.66■□□□□ 0.58
PHGDH-227ENST00000641811 SPATA20Q8TB22 786 aa18.66■□□□□ 0.58
PHGDH-227ENST00000641811 SMARCE1Q969G3 411 aa18.66■□□□□ 0.58
PHGDH-227ENST00000641811 GSDMAQ96QA5 445 aa18.66■□□□□ 0.58
PHGDH-227ENST00000641811 TRAF3IP3Q9Y228 551 aa18.66■□□□□ 0.58
PHGDH-227ENST00000641811 PRRG1O14668 218 aa18.65■□□□□ 0.58
PHGDH-227ENST00000641811 CALUO43852 315 aaPredicted RBP18.65■□□□□ 0.58
PHGDH-227ENST00000641811 PRPF40AO75400 957 aaKnown RBP18.65■□□□□ 0.58
PHGDH-227ENST00000641811 SMC2O95347 1197 aa18.65■□□□□ 0.58
PHGDH-227ENST00000641811 VNN2O95498 520 aa18.65■□□□□ 0.58
PHGDH-227ENST00000641811 HNRNPA1P09651 372 aaKnown RBP eCLIP18.65■□□□□ 0.58
PHGDH-227ENST00000641811 ATF2P15336 505 aa18.65■□□□□ 0.58
PHGDH-227ENST00000641811 ELF1P32519 619 aa18.65■□□□□ 0.58
PHGDH-227ENST00000641811 PNPLA4P41247 253 aa18.65■□□□□ 0.58
PHGDH-227ENST00000641811 NTHL1P78549 312 aa18.65■□□□□ 0.58
PHGDH-227ENST00000641811 ADCY1Q08828 1119 aa18.65■□□□□ 0.58
PHGDH-227ENST00000641811 UVSSAQ2YD98 709 aa18.65■□□□□ 0.58
PHGDH-227ENST00000641811 CEP135Q66GS9 1140 aa18.65■□□□□ 0.58
PHGDH-227ENST00000641811 ISM2Q6H9L7 571 aa18.65■□□□□ 0.58
PHGDH-227ENST00000641811 CYP26C1Q6V0L0 522 aa18.65■□□□□ 0.58
PHGDH-227ENST00000641811 CCDC149Q6ZUS6 474 aa18.65■□□□□ 0.58
PHGDH-227ENST00000641811 TRAPPC11Q7Z392 1133 aa18.65■□□□□ 0.58
PHGDH-227ENST00000641811 GRASPQ7Z6J2 395 aaPredicted RBP18.65■□□□□ 0.58
PHGDH-227ENST00000641811 LRRC52Q8N7C0 313 aa18.65■□□□□ 0.58
PHGDH-227ENST00000641811 OR10T2Q8NGX3 314 aa18.65■□□□□ 0.58
PHGDH-227ENST00000641811 PGLYRP2Q96PD5 576 aa18.65■□□□□ 0.58
PHGDH-227ENST00000641811 RTP3Q9BQQ7 232 aa18.65■□□□□ 0.58
PHGDH-227ENST00000641811 RHOBTB2Q9BYZ6 727 aa18.65■□□□□ 0.58
PHGDH-227ENST00000641811 CYP4F11Q9HBI6 524 aa18.65■□□□□ 0.58
PHGDH-227ENST00000641811 WDR6Q9NNW5 1121 aaKnown RBP18.65■□□□□ 0.58
PHGDH-227ENST00000641811 RMND1Q9NWS8 449 aa18.65■□□□□ 0.58
PHGDH-227ENST00000641811 MUTYHQ9UIF7 546 aa18.65■□□□□ 0.58
PHGDH-227ENST00000641811 POLIQ9UNA4 740 aa18.65■□□□□ 0.58
PHGDH-227ENST00000641811 NR2E1Q9Y466 385 aa18.65■□□□□ 0.58
PHGDH-227ENST00000641811 TSC2P49815 1807 aa18.65■□□□□ 0.58
PHGDH-227ENST00000641811 OR6C75A6NL08 312 aa18.64■□□□□ 0.57
PHGDH-227ENST00000641811 N4BP1O75113 896 aaKnown RBP18.64■□□□□ 0.57
PHGDH-227ENST00000641811 CST3P01034 146 aaPredicted RBP18.64■□□□□ 0.57
PHGDH-227ENST00000641811 HOXA9P31269 272 aa18.64■□□□□ 0.57
PHGDH-227ENST00000641811 PRCPP42785 496 aa18.64■□□□□ 0.57
PHGDH-227ENST00000641811 ZNF658Q5TYW1 1059 aaPredicted RBP18.64■□□□□ 0.57
PHGDH-227ENST00000641811 TPGS2Q68CL5 300 aa18.64■□□□□ 0.57
PHGDH-227ENST00000641811 METTL23Q86XA0 190 aa18.64■□□□□ 0.57
PHGDH-227ENST00000641811 TCEAL8Q8IYN2 117 aa18.64■□□□□ 0.57
PHGDH-227ENST00000641811 PARD3BQ8TEW8 1205 aa18.64■□□□□ 0.57
PHGDH-227ENST00000641811 TMEM174Q8WUU8 243 aa18.64■□□□□ 0.57
PHGDH-227ENST00000641811 HPDLQ96IR7 371 aa18.64■□□□□ 0.57
PHGDH-227ENST00000641811 HCFC1R1Q9NWW0 138 aa18.64■□□□□ 0.57
PHGDH-227ENST00000641811 AFF4Q9UHB7 1163 aaKnown RBP18.64■□□□□ 0.57
PHGDH-227ENST00000641811 HOOK1Q9UJC3 728 aaKnown RBP18.64■□□□□ 0.57
PHGDH-227ENST00000641811 DSEQ9UL01 958 aa18.64■□□□□ 0.57
PHGDH-227ENST00000641811 L1RE1Q9UN81 338 aa18.64■□□□□ 0.57
PHGDH-227ENST00000641811 SNX9Q9Y5X1 595 aa18.64■□□□□ 0.57
PHGDH-227ENST00000641811 CLUHO75153 1309 aa18.64■□□□□ 0.57
PHGDH-227ENST00000641811 DENND4AQ7Z401 1863 aa18.63■□□□□ 0.57
PHGDH-227ENST00000641811 ARHGEF37A1IGU5 675 aa18.63■□□□□ 0.57
PHGDH-227ENST00000641811 LRRIQ3A6PVS8 624 aaPredicted RBP18.63■□□□□ 0.57
PHGDH-227ENST00000641811 NR2F2P24468 414 aa18.63■□□□□ 0.57
PHGDH-227ENST00000641811 UBE2HP62256 183 aa18.63■□□□□ 0.57
PHGDH-227ENST00000641811 DLG4P78352 724 aa18.63■□□□□ 0.57
PHGDH-227ENST00000641811 MYBPC2Q14324 1141 aa18.63■□□□□ 0.57
PHGDH-227ENST00000641811 ZCWPW2Q504Y3 356 aa18.63■□□□□ 0.57
PHGDH-227ENST00000641811 PDCL2Q8N4E4 241 aa18.63■□□□□ 0.57
PHGDH-227ENST00000641811 TDRD5Q8NAT2 981 aaKnown RBP18.63■□□□□ 0.57
PHGDH-227ENST00000641811 OXCT2Q9BYC2 517 aaPredicted RBP18.63■□□□□ 0.57
PHGDH-227ENST00000641811 CRISPLD1Q9H336 500 aa18.63■□□□□ 0.57
PHGDH-227ENST00000641811 R3HCC1Q9Y3T6 440 aaKnown RBP18.63■□□□□ 0.57
PHGDH-227ENST00000641811 INSL5Q9Y5Q6 135 aa18.63■□□□□ 0.57
PHGDH-227ENST00000641811 PI4K2BG5E9Z4 385 aa18.62■□□□□ 0.57
PHGDH-227ENST00000641811 HUS1O60921 280 aa18.62■□□□□ 0.57
PHGDH-227ENST00000641811 XYLBO75191 536 aa18.62■□□□□ 0.57
PHGDH-227ENST00000641811 GPR17Q13304 367 aa18.62■□□□□ 0.57
PHGDH-227ENST00000641811 ELOA2Q8IYF1 753 aaPredicted RBP18.62■□□□□ 0.57
PHGDH-227ENST00000641811 ATAD1Q8NBU5 361 aa18.62■□□□□ 0.57
PHGDH-227ENST00000641811 EEF2KMTQ96G04 330 aa18.62■□□□□ 0.57
PHGDH-227ENST00000641811 GDAP2Q9NXN4 497 aa18.62■□□□□ 0.57
PHGDH-227ENST00000641811 DNMT3BQ9UBC3 853 aaKnown RBP18.62■□□□□ 0.57
PHGDH-227ENST00000641811 LIMD1Q9UGP4 676 aa18.62■□□□□ 0.57
PHGDH-227ENST00000641811 MAN1B1Q9UKM7 699 aa18.62■□□□□ 0.57
PHGDH-227ENST00000641811 USTQ9Y2C2 406 aa18.62■□□□□ 0.57
PHGDH-227ENST00000641811 FRMD4BQ9Y2L6 1034 aa18.62■□□□□ 0.57
PHGDH-227ENST00000641811 DOCK6Q96HP0 2047 aa18.61■□□□□ 0.57
PHGDH-227ENST00000641811 DCXO43602 365 aa18.61■□□□□ 0.57
PHGDH-227ENST00000641811 HCRTO43612 131 aa18.61■□□□□ 0.57
PHGDH-227ENST00000641811 AKAP3O75969 853 aa18.61■□□□□ 0.57
PHGDH-227ENST00000641811 LRG1P02750 347 aa18.61■□□□□ 0.57
PHGDH-227ENST00000641811 GBP2P32456 591 aaPredicted RBP18.61■□□□□ 0.57
PHGDH-227ENST00000641811 MYO1EQ12965 1108 aa18.61■□□□□ 0.57
PHGDH-227ENST00000641811 DUSP4Q13115 394 aa18.61■□□□□ 0.57
PHGDH-227ENST00000641811 ADAM9Q13443 819 aa18.61■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms