RNA–Protein interactions for RNA: ENST00000641570.1

PHGDH-220, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,036 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-220ENST00000641570 A8MXQ7 604 aa13.85□□□□□ -0.19
PHGDH-220ENST00000641570 RBAK-RBAKDNI3L0D1 243 aa13.85□□□□□ -0.19
PHGDH-220ENST00000641570 PPEF2O14830 753 aa13.85□□□□□ -0.19
PHGDH-220ENST00000641570 LRRN2O75325 713 aa13.85□□□□□ -0.19
PHGDH-220ENST00000641570 FGF18O76093 207 aa13.85□□□□□ -0.19
PHGDH-220ENST00000641570 RB1P06400 928 aa13.85□□□□□ -0.19
PHGDH-220ENST00000641570 BMPR1AP36894 532 aa13.85□□□□□ -0.19
PHGDH-220ENST00000641570 BRCC3P46736 316 aa13.85□□□□□ -0.19
PHGDH-220ENST00000641570 BPIFB4P59827 614 aa13.85□□□□□ -0.19
PHGDH-220ENST00000641570 MCCD1P59942 119 aaPredicted RBP13.85□□□□□ -0.19
PHGDH-220ENST00000641570 SMAD3P84022 425 aaKnown RBP13.85□□□□□ -0.19
PHGDH-220ENST00000641570 NAB2Q15742 525 aa13.85□□□□□ -0.19
PHGDH-220ENST00000641570 PRPF38BQ5VTL8 546 aaKnown RBP13.85□□□□□ -0.19
PHGDH-220ENST00000641570 OVOS1Q6IE37 1185 aa13.85□□□□□ -0.19
PHGDH-220ENST00000641570 APTXQ7Z2E3 356 aaKnown RBP13.85□□□□□ -0.19
PHGDH-220ENST00000641570 SLC39A11Q8N1S5 342 aa13.85□□□□□ -0.19
PHGDH-220ENST00000641570 SPC24Q8NBT2 197 aa13.85□□□□□ -0.19
PHGDH-220ENST00000641570 SPATA18Q8TC71 538 aa13.85□□□□□ -0.19
PHGDH-220ENST00000641570 SP7Q8TDD2 431 aaPredicted RBP13.85□□□□□ -0.19
PHGDH-220ENST00000641570 MICAL1Q8TDZ2 1067 aa13.85□□□□□ -0.19
PHGDH-220ENST00000641570 JAKMIP2Q96AA8 810 aa13.85□□□□□ -0.19
PHGDH-220ENST00000641570 TIFAQ96CG3 184 aa13.85□□□□□ -0.19
PHGDH-220ENST00000641570 SUSD3Q96L08 255 aa13.85□□□□□ -0.19
PHGDH-220ENST00000641570 PAAF1Q9BRP4 392 aa13.85□□□□□ -0.19
PHGDH-220ENST00000641570 TTPALQ9BTX7 342 aa13.85□□□□□ -0.19
PHGDH-220ENST00000641570 OXCT2Q9BYC2 517 aaPredicted RBP13.85□□□□□ -0.19
PHGDH-220ENST00000641570 EDEM3Q9BZQ6 932 aa13.85□□□□□ -0.19
PHGDH-220ENST00000641570 NKX2-4Q9H2Z4 354 aa13.85□□□□□ -0.19
PHGDH-220ENST00000641570 NLRC4Q9NPP4 1024 aa13.85□□□□□ -0.19
PHGDH-220ENST00000641570 POLIQ9UNA4 740 aa13.85□□□□□ -0.19
PHGDH-220ENST00000641570 ATP8B3O60423 1300 aa13.85□□□□□ -0.19
PHGDH-220ENST00000641570 AKR1B15C9JRZ8 316 aaPredicted RBP13.84□□□□□ -0.19
PHGDH-220ENST00000641570 TYMPP19971 482 aa13.84□□□□□ -0.19
PHGDH-220ENST00000641570 GNL1P36915 607 aaPredicted RBP13.84□□□□□ -0.19
PHGDH-220ENST00000641570 GLUD2P49448 558 aa13.84□□□□□ -0.19
PHGDH-220ENST00000641570 KLK7P49862 253 aa13.84□□□□□ -0.19
PHGDH-220ENST00000641570 PDE6CP51160 858 aa13.84□□□□□ -0.19
PHGDH-220ENST00000641570 SLC8A3P57103 927 aa13.84□□□□□ -0.19
PHGDH-220ENST00000641570 ASIC2Q16515 512 aa13.84□□□□□ -0.19
PHGDH-220ENST00000641570 SFMBT2Q5VUG0 894 aa13.84□□□□□ -0.19
PHGDH-220ENST00000641570 ANKS3Q6ZW76 656 aa13.84□□□□□ -0.19
PHGDH-220ENST00000641570 TMC7Q7Z402 723 aa13.84□□□□□ -0.19
PHGDH-220ENST00000641570 VPS36Q86VN1 386 aa13.84□□□□□ -0.19
PHGDH-220ENST00000641570 CLP1Q92989 425 aaKnown RBP13.84□□□□□ -0.19
PHGDH-220ENST00000641570 PPP2R3CQ969Q6 453 aa13.84□□□□□ -0.19
PHGDH-220ENST00000641570 NT5C1AQ9BXI3 368 aa13.84□□□□□ -0.19
PHGDH-220ENST00000641570 STK33Q9BYT3 514 aa13.84□□□□□ -0.19
PHGDH-220ENST00000641570 PBX4Q9BYU1 374 aa13.84□□□□□ -0.19
PHGDH-220ENST00000641570 XYLT2Q9H1B5 865 aa13.84□□□□□ -0.19
PHGDH-220ENST00000641570 SMYD3Q9H7B4 428 aa13.84□□□□□ -0.19
PHGDH-220ENST00000641570 MRPL17Q9NRX2 175 aaKnown RBP13.84□□□□□ -0.19
PHGDH-220ENST00000641570 IMPACTQ9P2X3 320 aa13.84□□□□□ -0.19
PHGDH-220ENST00000641570 HCSTQ9UBK5 93 aa13.84□□□□□ -0.19
PHGDH-220ENST00000641570 FBXL5Q9UKA1 691 aa13.84□□□□□ -0.19
PHGDH-220ENST00000641570 SIK3Q9Y2K2 1263 aa13.84□□□□□ -0.19
PHGDH-220ENST00000641570 FHOD1Q9Y613 1164 aa13.84□□□□□ -0.19
PHGDH-220ENST00000641570 A0A1W2PQJ5 194 aa13.83□□□□□ -0.2
PHGDH-220ENST00000641570 LCHNA4D1U4 455 aa13.83□□□□□ -0.2
PHGDH-220ENST00000641570 SPDYE4A6NLX3 237 aa13.83□□□□□ -0.2
PHGDH-220ENST00000641570 I3L4J1 428 aa13.83□□□□□ -0.2
PHGDH-220ENST00000641570 C2CD2LO14523 706 aa13.83□□□□□ -0.2
PHGDH-220ENST00000641570 MED7O43513 233 aa13.83□□□□□ -0.2
PHGDH-220ENST00000641570 TACC1O75410 805 aa13.83□□□□□ -0.2
PHGDH-220ENST00000641570 CSPG5O95196 566 aa13.83□□□□□ -0.2
PHGDH-220ENST00000641570 SOD2P04179 222 aa13.83□□□□□ -0.2
PHGDH-220ENST00000641570 WEE2P0C1S8 567 aa13.83□□□□□ -0.2
PHGDH-220ENST00000641570 FAM163BP0C2L3 166 aa13.83□□□□□ -0.2
PHGDH-220ENST00000641570 CPB1P15086 417 aa13.83□□□□□ -0.2
PHGDH-220ENST00000641570 MYOGP15173 224 aa13.83□□□□□ -0.2
PHGDH-220ENST00000641570 CD19P15391 556 aa13.83□□□□□ -0.2
PHGDH-220ENST00000641570 DNAJB2P25686 324 aa13.83□□□□□ -0.2
PHGDH-220ENST00000641570 ASPAP45381 313 aa13.83□□□□□ -0.2
PHGDH-220ENST00000641570 RAP1GAPP47736 663 aa13.83□□□□□ -0.2
PHGDH-220ENST00000641570 GSDMDP57764 484 aa13.83□□□□□ -0.2
PHGDH-220ENST00000641570 ZBED6P86452 979 aa13.83□□□□□ -0.2
PHGDH-220ENST00000641570 UBE3AQ05086 875 aa13.83□□□□□ -0.2
PHGDH-220ENST00000641570 PTK2Q05397 1052 aa13.83□□□□□ -0.2
PHGDH-220ENST00000641570 KCNMA1Q12791 1236 aa13.83□□□□□ -0.2
PHGDH-220ENST00000641570 MAPRE1Q15691 268 aaKnown RBP13.83□□□□□ -0.2
PHGDH-220ENST00000641570 PTPN21Q16825 1174 aa13.83□□□□□ -0.2
PHGDH-220ENST00000641570 PTPROQ16827 1216 aa13.83□□□□□ -0.2
PHGDH-220ENST00000641570 CTXN3Q4LDR2 81 aa13.83□□□□□ -0.2
PHGDH-220ENST00000641570 TIGD5Q53EQ6 642 aa13.83□□□□□ -0.2
PHGDH-220ENST00000641570 TDRD12Q587J7 1177 aaKnown RBP13.83□□□□□ -0.2
PHGDH-220ENST00000641570 FIGNQ5HY92 759 aa13.83□□□□□ -0.2
PHGDH-220ENST00000641570 IQCEQ6IPM2 695 aa13.83□□□□□ -0.2
PHGDH-220ENST00000641570 ELMSAN1Q6PJG2 1045 aa13.83□□□□□ -0.2
PHGDH-220ENST00000641570 TMEM270Q6UE05 265 aa13.83□□□□□ -0.2
PHGDH-220ENST00000641570 DDX53Q86TM3 631 aaKnown RBP13.83□□□□□ -0.2
PHGDH-220ENST00000641570 UNC93AQ86WB7 457 aa13.83□□□□□ -0.2
PHGDH-220ENST00000641570 ARHGEF19Q8IW93 802 aa13.83□□□□□ -0.2
PHGDH-220ENST00000641570 DCP1BQ8IZD4 617 aaKnown RBP13.83□□□□□ -0.2
PHGDH-220ENST00000641570 VPS52Q8N1B4 723 aa13.83□□□□□ -0.2
PHGDH-220ENST00000641570 PDCL2Q8N4E4 241 aa13.83□□□□□ -0.2
PHGDH-220ENST00000641570 KLHL23Q8NBE8 558 aa13.83□□□□□ -0.2
PHGDH-220ENST00000641570 ARNTL2Q8WYA1 636 aa13.83□□□□□ -0.2
PHGDH-220ENST00000641570 RIN2Q8WYP3 895 aaPredicted RBP13.83□□□□□ -0.2
PHGDH-220ENST00000641570 TATDN2Q93075 761 aa13.83□□□□□ -0.2
PHGDH-220ENST00000641570 HERC2P3Q9BVR0 1158 aa13.83□□□□□ -0.2
PHGDH-220ENST00000641570 EMILIN2Q9BXX0 1053 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms