RNA–Protein interactions for RNA: ENST00000641458.1

RGPD1-206, Transcript of RANBP2-like and GRIP domain containing 1, humanhuman

APPRIS ALT2 BASIC

Gene RGPD1, Length 5,271 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD1-206ENST00000641458 RSAD1Q9HA92 442 aa6.64□□□□□ -1.35
RGPD1-206ENST00000641458 GLI1P08151 1106 aa6.64□□□□□ -1.35
RGPD1-206ENST00000641458 TPM1P09493 284 aa6.64□□□□□ -1.35
RGPD1-206ENST00000641458 FGFR1P11362 822 aa6.64□□□□□ -1.35
RGPD1-206ENST00000641458 VDRP11473 427 aa6.64□□□□□ -1.35
RGPD1-206ENST00000641458 P4HA1P13674 534 aa6.64□□□□□ -1.35
RGPD1-206ENST00000641458 MMP8P22894 467 aa6.64□□□□□ -1.35
RGPD1-206ENST00000641458 DRAP1Q14919 205 aaPredicted RBP6.64□□□□□ -1.35
RGPD1-206ENST00000641458 MON1BQ7L1V2 547 aa6.64□□□□□ -1.35
RGPD1-206ENST00000641458 PPFIBP1Q86W92 1011 aa6.64□□□□□ -1.35
RGPD1-206ENST00000641458 SLC4A11Q8NBS3 891 aa6.64□□□□□ -1.35
RGPD1-206ENST00000641458 HERC2P3Q9BVR0 1158 aa6.64□□□□□ -1.35
RGPD1-206ENST00000641458 LSM14BQ9BX40 385 aaKnown RBP6.64□□□□□ -1.35
RGPD1-206ENST00000641458 PLVAPQ9BX97 442 aa6.64□□□□□ -1.35
RGPD1-206ENST00000641458 SDCBP2Q9H190 292 aa6.64□□□□□ -1.35
RGPD1-206ENST00000641458 NXF3Q9H4D5 531 aaKnown RBP6.64□□□□□ -1.35
RGPD1-206ENST00000641458 NOTCH4Q99466 2003 aa6.64□□□□□ -1.35
RGPD1-206ENST00000641458 FSCN2O14926 492 aa6.63□□□□□ -1.35
RGPD1-206ENST00000641458 EVI5O60447 810 aa6.63□□□□□ -1.35
RGPD1-206ENST00000641458 TRIM49P0CI25 452 aa6.63□□□□□ -1.35
RGPD1-206ENST00000641458 TRIM49CP0CI26 452 aa6.63□□□□□ -1.35
RGPD1-206ENST00000641458 C7P10643 843 aa6.63□□□□□ -1.35
RGPD1-206ENST00000641458 CYP11B1P15538 503 aa6.63□□□□□ -1.35
RGPD1-206ENST00000641458 UBE3AQ05086 875 aa6.63□□□□□ -1.35
RGPD1-206ENST00000641458 SOX4Q06945 474 aaPredicted RBP6.63□□□□□ -1.35
RGPD1-206ENST00000641458 RNF43Q68DV7 783 aa6.63□□□□□ -1.35
RGPD1-206ENST00000641458 LNX1Q8TBB1 728 aaPredicted RBP6.63□□□□□ -1.35
RGPD1-206ENST00000641458 CD101Q93033 1021 aa6.63□□□□□ -1.35
RGPD1-206ENST00000641458 C18orf25Q96B23 403 aaPredicted RBP6.63□□□□□ -1.35
RGPD1-206ENST00000641458 RTP3Q9BQQ7 232 aa6.63□□□□□ -1.35
RGPD1-206ENST00000641458 IFIH1Q9BYX4 1025 aaKnown RBP6.63□□□□□ -1.35
RGPD1-206ENST00000641458 WDR3Q9UNX4 943 aaKnown RBP eCLIP6.63□□□□□ -1.35
RGPD1-206ENST00000641458 FOXN3O00409 490 aaPredicted RBP6.63□□□□□ -1.35
RGPD1-206ENST00000641458 ITGA4P13612 1032 aa6.63□□□□□ -1.35
RGPD1-206ENST00000641458 DEKP35659 375 aaKnown RBP6.63□□□□□ -1.35
RGPD1-206ENST00000641458 CYLC1P35663 651 aaPredicted RBP6.63□□□□□ -1.35
RGPD1-206ENST00000641458 ACOT2P49753 483 aa6.63□□□□□ -1.35
RGPD1-206ENST00000641458 YARSP54577 528 aaKnown RBP6.63□□□□□ -1.35
RGPD1-206ENST00000641458 SP4Q02446 784 aa6.63□□□□□ -1.35
RGPD1-206ENST00000641458 TAP1Q03518 808 aa6.63□□□□□ -1.35
RGPD1-206ENST00000641458 TLE2Q04725 743 aa6.63□□□□□ -1.35
RGPD1-206ENST00000641458 ELAVL2Q12926 359 aaKnown RBP6.63□□□□□ -1.35
RGPD1-206ENST00000641458 CLEC16AQ2KHT3 1053 aa6.63□□□□□ -1.35
RGPD1-206ENST00000641458 ARTNQ5T4W7 220 aa6.63□□□□□ -1.35
RGPD1-206ENST00000641458 PAPD7Q5XG87 772 aaKnown RBP6.63□□□□□ -1.35
RGPD1-206ENST00000641458 PAXIP1Q6ZW49 1069 aaPredicted RBP6.63□□□□□ -1.35
RGPD1-206ENST00000641458 ZBTB10Q96DT7 871 aa6.63□□□□□ -1.35
RGPD1-206ENST00000641458 MCRS1Q96EZ8 462 aa6.63□□□□□ -1.35
RGPD1-206ENST00000641458 SLC9A7Q96T83 725 aa6.63□□□□□ -1.35
RGPD1-206ENST00000641458 ZSWIM1Q9BR11 485 aa6.63□□□□□ -1.35
RGPD1-206ENST00000641458 NHEJ1Q9H9Q4 299 aaPredicted RBP6.63□□□□□ -1.35
RGPD1-206ENST00000641458 GTF3C4Q9UKN8 822 aa6.63□□□□□ -1.35
RGPD1-206ENST00000641458 USP3Q9Y6I4 520 aa6.63□□□□□ -1.35
RGPD1-206ENST00000641458 ANKRD62A6NC57 917 aa6.63□□□□□ -1.35
RGPD1-206ENST00000641458 RTN2O75298 545 aa6.63□□□□□ -1.35
RGPD1-206ENST00000641458 THPOP40225 353 aa6.63□□□□□ -1.35
RGPD1-206ENST00000641458 NOMO3P69849 1222 aa6.63□□□□□ -1.35
RGPD1-206ENST00000641458 CFAP221Q4G0U5 840 aa6.63□□□□□ -1.35
RGPD1-206ENST00000641458 C16orf59Q7L2K0 433 aa6.63□□□□□ -1.35
RGPD1-206ENST00000641458 HSFY1Q96LI6 401 aa6.63□□□□□ -1.35
RGPD1-206ENST00000641458 AGPAT1Q99943 283 aa6.63□□□□□ -1.35
RGPD1-206ENST00000641458 UVRAGQ9P2Y5 699 aa6.63□□□□□ -1.35
RGPD1-206ENST00000641458 TCF3P15923 654 aa6.63□□□□□ -1.35
RGPD1-206ENST00000641458 CD52P31358 61 aa6.63□□□□□ -1.35
RGPD1-206ENST00000641458 PLA2G4AP47712 749 aa6.63□□□□□ -1.35
RGPD1-206ENST00000641458 GCLMP48507 274 aa6.63□□□□□ -1.35
RGPD1-206ENST00000641458 LHX1P48742 406 aa6.63□□□□□ -1.35
RGPD1-206ENST00000641458 KLK7P49862 253 aa6.63□□□□□ -1.35
RGPD1-206ENST00000641458 AMPD2Q01433 879 aa6.63□□□□□ -1.35
RGPD1-206ENST00000641458 PPIGQ13427 754 aaKnown RBP eCLIP6.63□□□□□ -1.35
RGPD1-206ENST00000641458 SOWAHAQ2M3V2 549 aa6.63□□□□□ -1.35
RGPD1-206ENST00000641458 TRIM60Q495X7 471 aa6.63□□□□□ -1.35
RGPD1-206ENST00000641458 LRRC38Q5VT99 294 aa6.63□□□□□ -1.35
RGPD1-206ENST00000641458 PM20D1Q6GTS8 502 aa6.63□□□□□ -1.35
RGPD1-206ENST00000641458 C1orf131Q8NDD1 294 aaKnown RBP6.63□□□□□ -1.35
RGPD1-206ENST00000641458 CENPIQ92674 756 aaPredicted RBP6.63□□□□□ -1.35
RGPD1-206ENST00000641458 FNBP1Q96RU3 617 aa6.63□□□□□ -1.35
RGPD1-206ENST00000641458 RPS6KC1Q96S38 1066 aa6.63□□□□□ -1.35
RGPD1-206ENST00000641458 MARCH5Q9NX47 278 aa6.63□□□□□ -1.35
RGPD1-206ENST00000641458 SNTG2Q9NY99 539 aa6.63□□□□□ -1.35
RGPD1-206ENST00000641458 WDR35Q9P2L0 1181 aa6.63□□□□□ -1.35
RGPD1-206ENST00000641458 EFR3BQ9Y2G0 817 aa6.63□□□□□ -1.35
RGPD1-206ENST00000641458 O00370 1275 aa6.63□□□□□ -1.35
RGPD1-206ENST00000641458 ZSCAN12O43309 604 aa6.63□□□□□ -1.35
RGPD1-206ENST00000641458 CLSTN1O94985 981 aa6.63□□□□□ -1.35
RGPD1-206ENST00000641458 THP07101 528 aa6.63□□□□□ -1.35
RGPD1-206ENST00000641458 TUBB4BP68371 445 aa6.63□□□□□ -1.35
RGPD1-206ENST00000641458 PTK2Q05397 1052 aa6.63□□□□□ -1.35
RGPD1-206ENST00000641458 SLC8B1Q6J4K2 584 aa6.63□□□□□ -1.35
RGPD1-206ENST00000641458 PSRC1Q6PGN9 363 aaPredicted RBP6.63□□□□□ -1.35
RGPD1-206ENST00000641458 PDZRN4Q6ZMN7 1036 aaPredicted RBP6.63□□□□□ -1.35
RGPD1-206ENST00000641458 SLC35F5Q8WV83 523 aa6.63□□□□□ -1.35
RGPD1-206ENST00000641458 IRGQQ8WZA9 623 aa6.63□□□□□ -1.35
RGPD1-206ENST00000641458 NCAPGQ9BPX3 1015 aa6.63□□□□□ -1.35
RGPD1-206ENST00000641458 RNF39Q9H2S5 420 aa6.63□□□□□ -1.35
RGPD1-206ENST00000641458 HIPK3Q9H422 1215 aa6.63□□□□□ -1.35
RGPD1-206ENST00000641458 PCIF1Q9H4Z3 704 aa6.63□□□□□ -1.35
RGPD1-206ENST00000641458 MIOSQ9NXC5 875 aa6.63□□□□□ -1.35
RGPD1-206ENST00000641458 CDH9Q9ULB4 789 aa6.63□□□□□ -1.35
RGPD1-206ENST00000641458 RWDD3Q9Y3V2 267 aa6.63□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms