RNA–Protein interactions for RNA: ENST00000641371.1

PHGDH-215, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 725 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-215ENST00000641371 NOMO3P69849 1222 aa10.36□□□□□ -0.75
PHGDH-215ENST00000641371 TMEM62Q0P6H9 643 aa10.36□□□□□ -0.75
PHGDH-215ENST00000641371 SV2CQ496J9 727 aa10.36□□□□□ -0.75
PHGDH-215ENST00000641371 GLE1Q53GS7 698 aaKnown RBP10.36□□□□□ -0.75
PHGDH-215ENST00000641371 TAF3Q5VWG9 929 aa10.36□□□□□ -0.75
PHGDH-215ENST00000641371 CDR2LQ86X02 465 aaPredicted RBP10.36□□□□□ -0.75
PHGDH-215ENST00000641371 TMEM192Q8IY95 271 aa10.36□□□□□ -0.75
PHGDH-215ENST00000641371 MCOLN2Q8IZK6 566 aa10.36□□□□□ -0.75
PHGDH-215ENST00000641371 CXorf38Q8TB03 319 aa10.36□□□□□ -0.75
PHGDH-215ENST00000641371 ZNF564Q8TBZ8 553 aaPredicted RBP10.36□□□□□ -0.75
PHGDH-215ENST00000641371 SPATA18Q8TC71 538 aa10.36□□□□□ -0.75
PHGDH-215ENST00000641371 ZNF606Q8WXB4 792 aa10.36□□□□□ -0.75
PHGDH-215ENST00000641371 ANKRD7Q92527 254 aa10.36□□□□□ -0.75
PHGDH-215ENST00000641371 WNT8AQ9H1J5 351 aa10.36□□□□□ -0.75
PHGDH-215ENST00000641371 CARD9Q9H257 536 aa10.36□□□□□ -0.75
PHGDH-215ENST00000641371 ABCB6Q9NP58 842 aa10.36□□□□□ -0.75
PHGDH-215ENST00000641371 RNF216Q9NWF9 866 aaPredicted RBP10.36□□□□□ -0.75
PHGDH-215ENST00000641371 NXF1Q9UBU9 619 aaKnown RBP10.36□□□□□ -0.75
PHGDH-215ENST00000641371 SALL4Q9UJQ4 1053 aa10.36□□□□□ -0.75
PHGDH-215ENST00000641371 TFR2Q9UP52 801 aa10.36□□□□□ -0.75
PHGDH-215ENST00000641371 TARSL2A2RTX5 802 aaKnown RBP10.35□□□□□ -0.75
PHGDH-215ENST00000641371 CCDC66A2RUB6 948 aa10.35□□□□□ -0.75
PHGDH-215ENST00000641371 CILPO75339 1184 aa10.35□□□□□ -0.75
PHGDH-215ENST00000641371 PARNO95453 639 aaKnown RBP10.35□□□□□ -0.75
PHGDH-215ENST00000641371 SETSIPP0DME0 302 aa10.35□□□□□ -0.75
PHGDH-215ENST00000641371 ITGA4P13612 1032 aa10.35□□□□□ -0.75
PHGDH-215ENST00000641371 LRPAP1P30533 357 aa10.35□□□□□ -0.75
PHGDH-215ENST00000641371 MAN1A1P33908 653 aa10.35□□□□□ -0.75
PHGDH-215ENST00000641371 TAF6P49848 677 aa10.35□□□□□ -0.75
PHGDH-215ENST00000641371 GSCP56915 257 aaPredicted RBP10.35□□□□□ -0.75
PHGDH-215ENST00000641371 ZNF200P98182 395 aaPredicted RBP10.35□□□□□ -0.75
PHGDH-215ENST00000641371 TRIM32Q13049 653 aa10.35□□□□□ -0.75
PHGDH-215ENST00000641371 PAK2Q13177 524 aa10.35□□□□□ -0.75
PHGDH-215ENST00000641371 HIC1Q14526 733 aa10.35□□□□□ -0.75
PHGDH-215ENST00000641371 UBXN11Q5T124 520 aa10.35□□□□□ -0.75
PHGDH-215ENST00000641371 COL13A1Q5TAT6 717 aaPredicted RBP10.35□□□□□ -0.75
PHGDH-215ENST00000641371 NT5DC3Q86UY8 548 aa10.35□□□□□ -0.75
PHGDH-215ENST00000641371 GPIHBP1Q8IV16 184 aa10.35□□□□□ -0.75
PHGDH-215ENST00000641371 SLC43A3Q8NBI5 491 aa10.35□□□□□ -0.75
PHGDH-215ENST00000641371 GADD45GIP1Q8TAE8 222 aaPredicted RBP10.35□□□□□ -0.75
PHGDH-215ENST00000641371 ACTRT1Q8TDG2 376 aa10.35□□□□□ -0.75
PHGDH-215ENST00000641371 ZNF296Q8WUU4 475 aaPredicted RBP10.35□□□□□ -0.75
PHGDH-215ENST00000641371 TMEM40Q8WWA1 233 aa10.35□□□□□ -0.75
PHGDH-215ENST00000641371 TMEM176AQ96HP8 235 aa10.35□□□□□ -0.75
PHGDH-215ENST00000641371 HES6Q96HZ4 224 aa10.35□□□□□ -0.75
PHGDH-215ENST00000641371 PCDHB18PQ96TA0 734 aa10.35□□□□□ -0.75
PHGDH-215ENST00000641371 ARID3AQ99856 593 aa10.35□□□□□ -0.75
PHGDH-215ENST00000641371 NT5C1AQ9BXI3 368 aa10.35□□□□□ -0.75
PHGDH-215ENST00000641371 EIF2AQ9BY44 585 aaKnown RBP10.35□□□□□ -0.75
PHGDH-215ENST00000641371 CDHR5Q9HBB8 845 aa10.35□□□□□ -0.75
PHGDH-215ENST00000641371 ERVK-5Q9HDB9 667 aa10.35□□□□□ -0.75
PHGDH-215ENST00000641371 FAM105AQ9NUU6 356 aa10.35□□□□□ -0.75
PHGDH-215ENST00000641371 PARVAQ9NVD7 372 aa10.35□□□□□ -0.75
PHGDH-215ENST00000641371 GDAP2Q9NXN4 497 aa10.35□□□□□ -0.75
PHGDH-215ENST00000641371 ADAM22Q9P0K1 906 aa10.35□□□□□ -0.75
PHGDH-215ENST00000641371 CNOT8Q9UFF9 292 aaKnown RBP10.35□□□□□ -0.75
PHGDH-215ENST00000641371 PARP2Q9UGN5 583 aa10.35□□□□□ -0.75
PHGDH-215ENST00000641371 PUF60Q9UHX1 559 aaKnown RBP10.35□□□□□ -0.75
PHGDH-215ENST00000641371 TTC7AQ9ULT0 858 aaPredicted RBP10.35□□□□□ -0.75
PHGDH-215ENST00000641371 ST3GAL5Q9UNP4 418 aa10.35□□□□□ -0.75
PHGDH-215ENST00000641371 PHF24Q9UPV7 400 aa10.35□□□□□ -0.75
PHGDH-215ENST00000641371 SBDSQ9Y3A5 250 aaKnown RBP eCLIP10.35□□□□□ -0.75
PHGDH-215ENST00000641371 NOC2LQ9Y3T9 749 aaKnown RBP10.35□□□□□ -0.75
PHGDH-215ENST00000641371 IPPQ9Y573 584 aa10.35□□□□□ -0.75
PHGDH-215ENST00000641371 UMODL1Q5DID0 1318 aa10.34□□□□□ -0.75
PHGDH-215ENST00000641371 CCDC188H7C350 402 aa10.34□□□□□ -0.75
PHGDH-215ENST00000641371 MYO1FO00160 1098 aa10.34□□□□□ -0.75
PHGDH-215ENST00000641371 DNM1LO00429 736 aa10.34□□□□□ -0.75
PHGDH-215ENST00000641371 BUB1BO60566 1050 aaPredicted RBP10.34□□□□□ -0.75
PHGDH-215ENST00000641371 ERLIN1O75477 346 aa10.34□□□□□ -0.75
PHGDH-215ENST00000641371 DESP17661 470 aa10.34□□□□□ -0.75
PHGDH-215ENST00000641371 FGFR4P22455 802 aa10.34□□□□□ -0.75
PHGDH-215ENST00000641371 MMP8P22894 467 aa10.34□□□□□ -0.75
PHGDH-215ENST00000641371 RPL9P32969 192 aaKnown RBP10.34□□□□□ -0.75
PHGDH-215ENST00000641371 THPOP40225 353 aa10.34□□□□□ -0.75
PHGDH-215ENST00000641371 IRX5P78411 483 aaPredicted RBP10.34□□□□□ -0.75
PHGDH-215ENST00000641371 BRD3Q15059 726 aa10.34□□□□□ -0.75
PHGDH-215ENST00000641371 CNGA2Q16280 664 aa10.34□□□□□ -0.75
PHGDH-215ENST00000641371 MAP9Q49MG5 647 aa10.34□□□□□ -0.75
PHGDH-215ENST00000641371 SGO2Q562F6 1265 aa10.34□□□□□ -0.75
PHGDH-215ENST00000641371 FBXO47Q5MNV8 452 aa10.34□□□□□ -0.75
PHGDH-215ENST00000641371 TEX35Q5T0J7 233 aa10.34□□□□□ -0.75
PHGDH-215ENST00000641371 NAA35Q5VZE5 725 aa10.34□□□□□ -0.75
PHGDH-215ENST00000641371 C9orf57Q5W0N0 161 aa10.34□□□□□ -0.75
PHGDH-215ENST00000641371 MON1BQ7L1V2 547 aa10.34□□□□□ -0.75
PHGDH-215ENST00000641371 MRPL10Q7Z7H8 261 aaKnown RBP10.34□□□□□ -0.75
PHGDH-215ENST00000641371 CREG2Q8IUH2 290 aa10.34□□□□□ -0.75
PHGDH-215ENST00000641371 MMGT1Q8N4V1 131 aa10.34□□□□□ -0.75
PHGDH-215ENST00000641371 MAIP1Q8WWC4 291 aa10.34□□□□□ -0.75
PHGDH-215ENST00000641371 DDX27Q96GQ7 796 aaKnown RBP10.34□□□□□ -0.75
PHGDH-215ENST00000641371 UROC1Q96N76 676 aa10.34□□□□□ -0.75
PHGDH-215ENST00000641371 RUNDC3BQ96NL0 473 aa10.34□□□□□ -0.75
PHGDH-215ENST00000641371 NCAPGQ9BPX3 1015 aa10.34□□□□□ -0.75
PHGDH-215ENST00000641371 NUP85Q9BW27 656 aa10.34□□□□□ -0.75
PHGDH-215ENST00000641371 FTHL17Q9BXU8 183 aa10.34□□□□□ -0.75
PHGDH-215ENST00000641371 NXF3Q9H4D5 531 aaKnown RBP10.34□□□□□ -0.75
PHGDH-215ENST00000641371 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.34□□□□□ -0.753e-8■■■■■ 240.4
PHGDH-215ENST00000641371 STARD7Q9NQZ5 370 aa10.34□□□□□ -0.75
PHGDH-215ENST00000641371 TAS2R14Q9NYV8 317 aa10.34□□□□□ -0.75
PHGDH-215ENST00000641371 STXBP5LQ9Y2K9 1186 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms