RNA–Protein interactions for RNA: ENST00000640957.1

SCARB2-227, Transcript of scavenger receptor class B member 2, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCARB2, Length 3,255 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-227ENST00000640957 UBR2Q8IWV8 1755 aa14.51□□□□□ -0.09
SCARB2-227ENST00000640957 ATP5HO75947 161 aa14.51□□□□□ -0.09
SCARB2-227ENST00000640957 TROVE2P10155 538 aaKnown RBP eCLIP14.51□□□□□ -0.09
SCARB2-227ENST00000640957 ACVR2BQ13705 512 aa14.51□□□□□ -0.09
SCARB2-227ENST00000640957 MYBPC3Q14896 1274 aa14.51□□□□□ -0.09
SCARB2-227ENST00000640957 PDK4Q16654 411 aa14.51□□□□□ -0.09
SCARB2-227ENST00000640957 C1orf146Q5VVC0 180 aa14.51□□□□□ -0.09
SCARB2-227ENST00000640957 EPS8L1Q8TE68 723 aa14.51□□□□□ -0.09
SCARB2-227ENST00000640957 GRAMD1AQ96CP6 724 aa14.51□□□□□ -0.09
SCARB2-227ENST00000640957 NSL1Q96IY1 281 aa14.51□□□□□ -0.09
SCARB2-227ENST00000640957 HIC2Q96JB3 615 aa14.51□□□□□ -0.09
SCARB2-227ENST00000640957 DCLK3Q9C098 648 aa14.51□□□□□ -0.09
SCARB2-227ENST00000640957 WHRNQ9P202 907 aa14.51□□□□□ -0.09
SCARB2-227ENST00000640957 CNTNAP4Q9C0A0 1308 aa14.51□□□□□ -0.09
SCARB2-227ENST00000640957 PDE5AO76074 875 aa14.51□□□□□ -0.09
SCARB2-227ENST00000640957 PPP4CP60510 307 aa14.51□□□□□ -0.09
SCARB2-227ENST00000640957 BFSP1Q12934 665 aa14.51□□□□□ -0.09
SCARB2-227ENST00000640957 ASPRV1Q53RT3 343 aa14.51□□□□□ -0.09
SCARB2-227ENST00000640957 CCDC62Q6P9F0 684 aa14.51□□□□□ -0.09
SCARB2-227ENST00000640957 GSTCDQ8NEC7 633 aa14.51□□□□□ -0.09
SCARB2-227ENST00000640957 CEP70Q8NHQ1 597 aa14.51□□□□□ -0.09
SCARB2-227ENST00000640957 POMGNT1Q8WZA1 660 aa14.51□□□□□ -0.09
SCARB2-227ENST00000640957 TEKT1Q969V4 418 aa14.51□□□□□ -0.09
SCARB2-227ENST00000640957 TDRKHQ9Y2W6 561 aaKnown RBP14.51□□□□□ -0.09
SCARB2-227ENST00000640957 TCP10L2B9ZVM9 353 aa14.51□□□□□ -0.09
SCARB2-227ENST00000640957 H0YIN7 160 aa14.51□□□□□ -0.09
SCARB2-227ENST00000640957 CFHP08603 1231 aa14.51□□□□□ -0.09
SCARB2-227ENST00000640957 MMP10P09238 476 aa14.51□□□□□ -0.09
SCARB2-227ENST00000640957 FAM200BP0CF97 657 aa14.51□□□□□ -0.09
SCARB2-227ENST00000640957 GRIA2P42262 883 aa14.51□□□□□ -0.09
SCARB2-227ENST00000640957 ARSEP51690 589 aa14.51□□□□□ -0.09
SCARB2-227ENST00000640957 ZNF543Q08ER8 600 aa14.51□□□□□ -0.09
SCARB2-227ENST00000640957 VPS72Q15906 364 aa14.51□□□□□ -0.09
SCARB2-227ENST00000640957 RIPOR1Q6ZS17 1223 aa14.51□□□□□ -0.09
SCARB2-227ENST00000640957 RGS9BPQ6ZS82 235 aa14.51□□□□□ -0.09
SCARB2-227ENST00000640957 LRRN4Q8WUT4 740 aa14.51□□□□□ -0.09
SCARB2-227ENST00000640957 GJD4Q96KN9 370 aaPredicted RBP14.51□□□□□ -0.09
SCARB2-227ENST00000640957 MMADHCQ9H3L0 296 aaPredicted RBP14.51□□□□□ -0.09
SCARB2-227ENST00000640957 SYNCQ9H7C4 482 aa14.51□□□□□ -0.09
SCARB2-227ENST00000640957 DNPEPQ9ULA0 475 aa14.51□□□□□ -0.09
SCARB2-227ENST00000640957 ADGRA3Q8IWK6 1321 aa14.51□□□□□ -0.09
SCARB2-227ENST00000640957 ARL4CP56559 192 aa14.5□□□□□ -0.09
SCARB2-227ENST00000640957 TAS2R40P59535 323 aa14.5□□□□□ -0.09
SCARB2-227ENST00000640957 RASSF3Q86WH2 238 aa14.5□□□□□ -0.09
SCARB2-227ENST00000640957 CD101Q93033 1021 aa14.5□□□□□ -0.09
SCARB2-227ENST00000640957 TMEM121Q9BTD3 319 aa14.5□□□□□ -0.09
SCARB2-227ENST00000640957 KIFC3Q9BVG8 833 aa14.5□□□□□ -0.09
SCARB2-227ENST00000640957 ASCC2Q9H1I8 757 aaPredicted RBP14.5□□□□□ -0.09
SCARB2-227ENST00000640957 LRRC19Q9H756 370 aa14.5□□□□□ -0.09
SCARB2-227ENST00000640957 TDRD3Q9H7E2 651 aaKnown RBP14.5□□□□□ -0.09
SCARB2-227ENST00000640957 K7ENM7 598 aa14.5□□□□□ -0.09
SCARB2-227ENST00000640957 FCHO1O14526 889 aa14.5□□□□□ -0.09
SCARB2-227ENST00000640957 ZBTB5O15062 677 aa14.5□□□□□ -0.09
SCARB2-227ENST00000640957 MSH4O15457 936 aa14.5□□□□□ -0.09
SCARB2-227ENST00000640957 HSPA6P17066 643 aa14.5□□□□□ -0.09
SCARB2-227ENST00000640957 FMO1Q01740 532 aa14.5□□□□□ -0.09
SCARB2-227ENST00000640957 ZNF568Q3ZCX4 644 aa14.5□□□□□ -0.09
SCARB2-227ENST00000640957 TREML1Q86YW5 311 aa14.5□□□□□ -0.09
SCARB2-227ENST00000640957 CERS5Q8N5B7 392 aa14.5□□□□□ -0.09
SCARB2-227ENST00000640957 PLEKHO2Q8TD55 490 aa14.5□□□□□ -0.09
SCARB2-227ENST00000640957 DENND1AQ8TEH3 1009 aa14.5□□□□□ -0.09
SCARB2-227ENST00000640957 SEMA4DQ92854 862 aa14.5□□□□□ -0.09
SCARB2-227ENST00000640957 AGBL1Q96MI9 1066 aa14.5□□□□□ -0.09
SCARB2-227ENST00000640957 KREMEN1Q96MU8 473 aa14.5□□□□□ -0.09
SCARB2-227ENST00000640957 ANKFY1Q9P2R3 1169 aa14.5□□□□□ -0.09
SCARB2-227ENST00000640957 WRAP73Q9P2S5 460 aaPredicted RBP14.5□□□□□ -0.09
SCARB2-227ENST00000640957 PCDHGB4Q9UN71 923 aa14.5□□□□□ -0.09
SCARB2-227ENST00000640957 PCDHGB5Q9Y5G0 923 aa14.5□□□□□ -0.09
SCARB2-227ENST00000640957 FAM155BO75949 473 aa14.49□□□□□ -0.09
SCARB2-227ENST00000640957 CHRNA5P30532 468 aa14.49□□□□□ -0.09
SCARB2-227ENST00000640957 CCDC15Q0P6D6 951 aa14.49□□□□□ -0.09
SCARB2-227ENST00000640957 AP1B1Q10567 949 aa14.49□□□□□ -0.09
SCARB2-227ENST00000640957 LIN52Q52LA3 116 aa14.49□□□□□ -0.09
SCARB2-227ENST00000640957 C11orf63Q6NUN7 778 aa14.49□□□□□ -0.09
SCARB2-227ENST00000640957 SPATA24Q86W54 205 aa14.49□□□□□ -0.09
SCARB2-227ENST00000640957 RBM15BQ8NDT2 890 aaKnown RBP14.49□□□□□ -0.09
SCARB2-227ENST00000640957 ERMNQ8TAM6 284 aa14.49□□□□□ -0.09
SCARB2-227ENST00000640957 SLC26A7Q8TE54 656 aa14.49□□□□□ -0.09
SCARB2-227ENST00000640957 PSPC1Q8WXF1 523 aaKnown RBP14.49□□□□□ -0.09
SCARB2-227ENST00000640957 RILPQ96NA2 401 aa14.49□□□□□ -0.09
SCARB2-227ENST00000640957 C11orf70Q9BRQ4 267 aa14.49□□□□□ -0.09
SCARB2-227ENST00000640957 TSSK1BQ9BXA7 367 aa14.49□□□□□ -0.09
SCARB2-227ENST00000640957 GINM1Q9NU53 330 aa14.49□□□□□ -0.09
SCARB2-227ENST00000640957 ZMPSTE24O75844 475 aa14.49□□□□□ -0.09
SCARB2-227ENST00000640957 CYP3A4P08684 503 aa14.49□□□□□ -0.09
SCARB2-227ENST00000640957 MSX2P35548 267 aaPredicted RBP14.49□□□□□ -0.09
SCARB2-227ENST00000640957 NCOA4Q13772 614 aa14.49□□□□□ -0.09
SCARB2-227ENST00000640957 RASA3Q14644 834 aa14.49□□□□□ -0.09
SCARB2-227ENST00000640957 MYLK4Q86YV6 388 aaPredicted RBP14.49□□□□□ -0.09
SCARB2-227ENST00000640957 ATL2Q8NHH9 583 aa14.49□□□□□ -0.09
SCARB2-227ENST00000640957 ZFAND2BQ8WV99 257 aa14.49□□□□□ -0.09
SCARB2-227ENST00000640957 TRIM55Q9BYV6 548 aa14.49□□□□□ -0.09
SCARB2-227ENST00000640957 MANSC1Q9H8J5 431 aa14.49□□□□□ -0.09
SCARB2-227ENST00000640957 PARVGQ9HBI0 331 aa14.49□□□□□ -0.09
SCARB2-227ENST00000640957 DOT1LQ8TEK3 1739 aa14.49□□□□□ -0.09
SCARB2-227ENST00000640957 EYA4O95677 639 aa14.49□□□□□ -0.09
SCARB2-227ENST00000640957 ANPEPP15144 967 aa14.49□□□□□ -0.09
SCARB2-227ENST00000640957 GALK1P51570 392 aa14.49□□□□□ -0.09
SCARB2-227ENST00000640957 SLC25A3Q00325 362 aa14.49□□□□□ -0.09
SCARB2-227ENST00000640957 SPIRE1Q08AE8 756 aa14.49□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms