RNA–Protein interactions for RNA: ENST00000640615.1

HLA-B-258, Transcript of major histocompatibility complex, class I, B, humanhuman

BASIC

Gene HLA-B, Length 240 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-B-258ENST00000640615 PRG3Q9Y2Y8 225 aaPredicted RBP9.39□□□□□ -0.91
HLA-B-258ENST00000640615 PCDHB4Q9Y5E5 795 aa9.39□□□□□ -0.91
HLA-B-258ENST00000640615 SLC4A7Q9Y6M7 1214 aa9.39□□□□□ -0.91
HLA-B-258ENST00000640615 CYB561D2O14569 222 aa9.38□□□□□ -0.91
HLA-B-258ENST00000640615 CYP26A1O43174 497 aa9.38□□□□□ -0.91
HLA-B-258ENST00000640615 HUS1O60921 280 aa9.38□□□□□ -0.91
HLA-B-258ENST00000640615 TADA2AO75478 443 aa9.38□□□□□ -0.91
HLA-B-258ENST00000640615 CCDC172P0C7W6 258 aa9.38□□□□□ -0.91
HLA-B-258ENST00000640615 ACO1P21399 889 aaKnown RBP9.38□□□□□ -0.91
HLA-B-258ENST00000640615 KLHL30Q0D2K2 578 aa9.38□□□□□ -0.91
HLA-B-258ENST00000640615 BTG3Q14201 252 aaPredicted RBP9.38□□□□□ -0.91
HLA-B-258ENST00000640615 SPOUT1Q5T280 376 aaKnown RBP9.38□□□□□ -0.91
HLA-B-258ENST00000640615 E4F1Q66K89 784 aaPredicted RBP9.38□□□□□ -0.91
HLA-B-258ENST00000640615 TMEM270Q6UE05 265 aa9.38□□□□□ -0.91
HLA-B-258ENST00000640615 IRF2BP2Q7Z5L9 587 aa9.38□□□□□ -0.91
HLA-B-258ENST00000640615 TMTC1Q8IUR5 882 aa9.38□□□□□ -0.91
HLA-B-258ENST00000640615 FMNL3Q8IVF7 1028 aa9.38□□□□□ -0.91
HLA-B-258ENST00000640615 FAM71AQ8IYT1 594 aa9.38□□□□□ -0.91
HLA-B-258ENST00000640615 C3orf58Q8NDZ4 430 aa9.38□□□□□ -0.91
HLA-B-258ENST00000640615 CCDC112Q8NEF3 446 aa9.38□□□□□ -0.91
HLA-B-258ENST00000640615 APPL2Q8NEU8 664 aa9.38□□□□□ -0.91
HLA-B-258ENST00000640615 HASPINQ8TF76 798 aa9.38□□□□□ -0.91
HLA-B-258ENST00000640615 YME1L1Q96TA2 773 aa9.38□□□□□ -0.91
HLA-B-258ENST00000640615 MRPL45Q9BRJ2 306 aaKnown RBP9.38□□□□□ -0.91
HLA-B-258ENST00000640615 TMEM175Q9BSA9 504 aa9.38□□□□□ -0.91
HLA-B-258ENST00000640615 ZBED2Q9BTP6 218 aa9.38□□□□□ -0.91
HLA-B-258ENST00000640615 COLEC11Q9BWP8 271 aa9.38□□□□□ -0.91
HLA-B-258ENST00000640615 BCO2Q9BYV7 579 aa9.38□□□□□ -0.91
HLA-B-258ENST00000640615 MTIF3Q9H2K0 278 aaKnown RBP9.38□□□□□ -0.91
HLA-B-258ENST00000640615 CISHQ9NSE2 258 aa9.38□□□□□ -0.91
HLA-B-258ENST00000640615 GDAP2Q9NXN4 497 aa9.38□□□□□ -0.91
HLA-B-258ENST00000640615 HCSTQ9UBK5 93 aa9.38□□□□□ -0.91
HLA-B-258ENST00000640615 FAN1Q9Y2M0 1017 aa9.38□□□□□ -0.91
HLA-B-258ENST00000640615 TET1Q8NFU7 2136 aa9.37□□□□□ -0.91
HLA-B-258ENST00000640615 ANK1P16157 1881 aa9.37□□□□□ -0.91
HLA-B-258ENST00000640615 RALGAPA2Q2PPJ7 1873 aa9.37□□□□□ -0.91
HLA-B-258ENST00000640615 F8W810 466 aa9.37□□□□□ -0.91
HLA-B-258ENST00000640615 I3L4J1 428 aa9.37□□□□□ -0.91
HLA-B-258ENST00000640615 DLL1O00548 723 aa9.37□□□□□ -0.91
HLA-B-258ENST00000640615 NRP1O14786 923 aa9.37□□□□□ -0.91
HLA-B-258ENST00000640615 KIF4AO95239 1232 aa9.37□□□□□ -0.91
HLA-B-258ENST00000640615 SERPING1P05155 500 aa9.37□□□□□ -0.91
HLA-B-258ENST00000640615 ITGB1P05556 798 aa9.37□□□□□ -0.91
HLA-B-258ENST00000640615 GALTP07902 379 aa9.37□□□□□ -0.91
HLA-B-258ENST00000640615 PAX3P23760 479 aa9.37□□□□□ -0.91
HLA-B-258ENST00000640615 HNRNPH3P31942 346 aaKnown RBP9.37□□□□□ -0.91
HLA-B-258ENST00000640615 CLCN1P35523 988 aa9.37□□□□□ -0.91
HLA-B-258ENST00000640615 BRCC3P46736 316 aa9.37□□□□□ -0.91
HLA-B-258ENST00000640615 SLC11A1P49279 550 aa9.37□□□□□ -0.91
HLA-B-258ENST00000640615 MEA1Q16626 185 aa9.37□□□□□ -0.91
HLA-B-258ENST00000640615 SOWAHAQ2M3V2 549 aa9.37□□□□□ -0.91
HLA-B-258ENST00000640615 TIGD5Q53EQ6 642 aa9.37□□□□□ -0.91
HLA-B-258ENST00000640615 ZNF394Q53GI3 561 aa9.37□□□□□ -0.91
HLA-B-258ENST00000640615 TDRD12Q587J7 1177 aaKnown RBP9.37□□□□□ -0.91
HLA-B-258ENST00000640615 WDR59Q6PJI9 974 aa9.37□□□□□ -0.91
HLA-B-258ENST00000640615 CD300LGQ6UXG3 332 aa9.37□□□□□ -0.91
HLA-B-258ENST00000640615 CYP26C1Q6V0L0 522 aa9.37□□□□□ -0.91
HLA-B-258ENST00000640615 CMTR2Q8IYT2 770 aaKnown RBP9.37□□□□□ -0.91
HLA-B-258ENST00000640615 PDCL2Q8N4E4 241 aa9.37□□□□□ -0.91
HLA-B-258ENST00000640615 TTC39CQ8N584 583 aa9.37□□□□□ -0.91
HLA-B-258ENST00000640615 DEFB123Q8N688 67 aa9.37□□□□□ -0.91
HLA-B-258ENST00000640615 TOP6BLQ8N6T0 577 aa9.37□□□□□ -0.91
HLA-B-258ENST00000640615 UBR7Q8N806 425 aa9.37□□□□□ -0.91
HLA-B-258ENST00000640615 RBBP8NLQ8NC74 664 aaPredicted RBP9.37□□□□□ -0.91
HLA-B-258ENST00000640615 OR6B3Q8NGW1 331 aa9.37□□□□□ -0.91
HLA-B-258ENST00000640615 ZNF689Q96CS4 500 aaPredicted RBP9.37□□□□□ -0.91
HLA-B-258ENST00000640615 SENP8Q96LD8 212 aa9.37□□□□□ -0.91
HLA-B-258ENST00000640615 SLC9A7Q96T83 725 aa9.37□□□□□ -0.91
HLA-B-258ENST00000640615 CHP1Q99653 195 aa9.37□□□□□ -0.91
HLA-B-258ENST00000640615 SNX25Q9H3E2 840 aa9.37□□□□□ -0.91
HLA-B-258ENST00000640615 KCNF1Q9H3M0 494 aa9.37□□□□□ -0.91
HLA-B-258ENST00000640615 HAUS4Q9H6D7 363 aa9.37□□□□□ -0.91
HLA-B-258ENST00000640615 PUF60Q9UHX1 559 aaKnown RBP9.37□□□□□ -0.91
HLA-B-258ENST00000640615 L1RE1Q9UN81 338 aa9.37□□□□□ -0.91
HLA-B-258ENST00000640615 BZW2Q9Y6E2 419 aaKnown RBP9.37□□□□□ -0.91
HLA-B-258ENST00000640615 CITO14578 2027 aa9.36□□□□□ -0.91
HLA-B-258ENST00000640615 SOWAHDA6NJG2 315 aa9.36□□□□□ -0.91
HLA-B-258ENST00000640615 A8MXQ7 604 aa9.36□□□□□ -0.91
HLA-B-258ENST00000640615 NT5C1B-RDH14C9J2C7 533 aa9.36□□□□□ -0.91
HLA-B-258ENST00000640615 TRAPPC3O43617 180 aa9.36□□□□□ -0.91
HLA-B-258ENST00000640615 CILPO75339 1184 aa9.36□□□□□ -0.91
HLA-B-258ENST00000640615 TACC1O75410 805 aa9.36□□□□□ -0.91
HLA-B-258ENST00000640615 GJB5O95377 273 aa9.36□□□□□ -0.91
HLA-B-258ENST00000640615 CALCAP01258 141 aa9.36□□□□□ -0.91
HLA-B-258ENST00000640615 PLEKP08567 350 aaPredicted RBP9.36□□□□□ -0.91
HLA-B-258ENST00000640615 ODC1P11926 461 aa9.36□□□□□ -0.91
HLA-B-258ENST00000640615 ATP2A2P16615 1042 aaKnown RBP9.36□□□□□ -0.91
HLA-B-258ENST00000640615 GNL1P36915 607 aaPredicted RBP9.36□□□□□ -0.91
HLA-B-258ENST00000640615 EIF4A3P38919 411 aaKnown RBP9.36□□□□□ -0.91
HLA-B-258ENST00000640615 PBX3P40426 434 aa9.36□□□□□ -0.91
HLA-B-258ENST00000640615 ALDH7A1P49419 539 aaKnown RBP9.36□□□□□ -0.91
HLA-B-258ENST00000640615 AARSP49588 968 aaKnown RBP eCLIP9.36□□□□□ -0.91
HLA-B-258ENST00000640615 NDST1P52848 882 aa9.36□□□□□ -0.91
HLA-B-258ENST00000640615 BCAR1P56945 870 aa9.36□□□□□ -0.91
HLA-B-258ENST00000640615 BPIFB4P59827 614 aa9.36□□□□□ -0.91
HLA-B-258ENST00000640615 CCZ1BP86790 482 aa9.36□□□□□ -0.91
HLA-B-258ENST00000640615 CCZ1P86791 482 aaPredicted RBP9.36□□□□□ -0.91
HLA-B-258ENST00000640615 CDK17Q00537 523 aa9.36□□□□□ -0.91
HLA-B-258ENST00000640615 PTK2Q05397 1052 aa9.36□□□□□ -0.91
HLA-B-258ENST00000640615 WSCD1Q658N2 575 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms