RNA–Protein interactions for RNA: ENST00000640076.1

SCARB2-220, Transcript of scavenger receptor class B member 2, humanhuman

TSL 2

Gene SCARB2, Length 1,991 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-220ENST00000640076 ARVCFO00192 962 aa8.64□□□□□ -1.03
SCARB2-220ENST00000640076 CLIC2O15247 247 aa8.64□□□□□ -1.03
SCARB2-220ENST00000640076 FGFR1OPO95684 399 aaKnown RBP8.64□□□□□ -1.03
SCARB2-220ENST00000640076 TFRCP02786 760 aaKnown RBP8.64□□□□□ -1.03
SCARB2-220ENST00000640076 EDN1P05305 212 aa8.64□□□□□ -1.03
SCARB2-220ENST00000640076 PRKCBP05771 671 aa8.64□□□□□ -1.03
SCARB2-220ENST00000640076 CELA3AP09093 270 aa8.64□□□□□ -1.03
SCARB2-220ENST00000640076 IQCF3P0C7M6 154 aa8.64□□□□□ -1.03
SCARB2-220ENST00000640076 IMPDH2P12268 514 aa8.64□□□□□ -1.03
SCARB2-220ENST00000640076 RPL13P26373 211 aaKnown RBP8.64□□□□□ -1.03
SCARB2-220ENST00000640076 ADSSP30520 456 aa8.64□□□□□ -1.03
SCARB2-220ENST00000640076 ADAM9Q13443 819 aa8.64□□□□□ -1.03
SCARB2-220ENST00000640076 CCDC70Q6NSX1 233 aa8.64□□□□□ -1.03
SCARB2-220ENST00000640076 SARM1Q6SZW1 724 aa8.64□□□□□ -1.03
SCARB2-220ENST00000640076 SRGAP1Q7Z6B7 1085 aa8.64□□□□□ -1.03
SCARB2-220ENST00000640076 TMEM174Q8WUU8 243 aa8.64□□□□□ -1.03
SCARB2-220ENST00000640076 ANP32BQ92688 251 aaKnown RBP8.64□□□□□ -1.03
SCARB2-220ENST00000640076 CBWD1Q9BRT8 395 aa8.64□□□□□ -1.03
SCARB2-220ENST00000640076 SEZ6LQ9BYH1 1024 aa8.64□□□□□ -1.03
SCARB2-220ENST00000640076 DMAC2Q9NW81 257 aa8.64□□□□□ -1.03
SCARB2-220ENST00000640076 USP20Q9Y2K6 914 aa8.64□□□□□ -1.03
SCARB2-220ENST00000640076 KCNJ18B7U540 433 aa8.63□□□□□ -1.03
SCARB2-220ENST00000640076 ACKR2O00590 384 aa8.63□□□□□ -1.03
SCARB2-220ENST00000640076 CETN3O15182 167 aa8.63□□□□□ -1.03
SCARB2-220ENST00000640076 B4GALT4O60513 344 aa8.63□□□□□ -1.03
SCARB2-220ENST00000640076 CSDE1O75534 798 aaKnown RBP8.63□□□□□ -1.03
SCARB2-220ENST00000640076 ADH1BP00325 375 aa8.63□□□□□ -1.03
SCARB2-220ENST00000640076 RPLP2P05387 115 aaKnown RBP8.63□□□□□ -1.03
SCARB2-220ENST00000640076 EEF1GP26641 437 aaKnown RBP8.63□□□□□ -1.03
SCARB2-220ENST00000640076 DGKGP49619 791 aa8.63□□□□□ -1.03
SCARB2-220ENST00000640076 LIG4P49917 911 aa8.63□□□□□ -1.03
SCARB2-220ENST00000640076 CDK7P50613 346 aa8.63□□□□□ -1.03
SCARB2-220ENST00000640076 NEK3P51956 506 aa8.63□□□□□ -1.03
SCARB2-220ENST00000640076 SPAG1Q07617 926 aa8.63□□□□□ -1.03
SCARB2-220ENST00000640076 KCNJ12Q14500 433 aa8.63□□□□□ -1.03
SCARB2-220ENST00000640076 FAM187BQ17R55 369 aa8.63□□□□□ -1.03
SCARB2-220ENST00000640076 TCP11X2Q5H9J9 407 aa8.63□□□□□ -1.03
SCARB2-220ENST00000640076 ZPBP2Q6X784 338 aa8.63□□□□□ -1.03
SCARB2-220ENST00000640076 APTXQ7Z2E3 356 aaKnown RBP8.63□□□□□ -1.03
SCARB2-220ENST00000640076 RSPH3Q86UC2 560 aa8.63□□□□□ -1.03
SCARB2-220ENST00000640076 FAM114A1Q8IWE2 563 aa8.63□□□□□ -1.03
SCARB2-220ENST00000640076 C1orf127Q8N9H9 656 aa8.63□□□□□ -1.03
SCARB2-220ENST00000640076 BICD1Q96G01 975 aa8.63□□□□□ -1.03
SCARB2-220ENST00000640076 CNOT6LQ96LI5 555 aaKnown RBP8.63□□□□□ -1.03
SCARB2-220ENST00000640076 OSMRQ99650 979 aa8.63□□□□□ -1.03
SCARB2-220ENST00000640076 MRPL4Q9BYD3 311 aaKnown RBP8.63□□□□□ -1.03
SCARB2-220ENST00000640076 TRPV6Q9H1D0 765 aa8.63□□□□□ -1.03
SCARB2-220ENST00000640076 PRMT7Q9NVM4 692 aaPredicted RBP8.63□□□□□ -1.03
SCARB2-220ENST00000640076 GINS2Q9Y248 185 aa8.63□□□□□ -1.03
SCARB2-220ENST00000640076 STYXL1Q9Y6J8 313 aa8.63□□□□□ -1.03
SCARB2-220ENST00000640076 LRRC10BA6NIK2 292 aa8.62□□□□□ -1.03
SCARB2-220ENST00000640076 B4GALT5O43286 388 aa8.62□□□□□ -1.03
SCARB2-220ENST00000640076 AKAP3O75969 853 aa8.62□□□□□ -1.03
SCARB2-220ENST00000640076 GNA14O95837 355 aa8.62□□□□□ -1.03
SCARB2-220ENST00000640076 FAM200BP0CF97 657 aa8.62□□□□□ -1.03
SCARB2-220ENST00000640076 DARSP14868 501 aaKnown RBP8.62□□□□□ -1.03
SCARB2-220ENST00000640076 CASP4P49662 377 aa8.62□□□□□ -1.03
SCARB2-220ENST00000640076 CYP2J2P51589 502 aa8.62□□□□□ -1.03
SCARB2-220ENST00000640076 CRYBB1P53674 252 aaPredicted RBP8.62□□□□□ -1.03
SCARB2-220ENST00000640076 MRPS6P82932 125 aaKnown RBP8.62□□□□□ -1.03
SCARB2-220ENST00000640076 PRPF4BQ13523 1007 aaKnown RBP8.62□□□□□ -1.03
SCARB2-220ENST00000640076 SNX17Q15036 470 aa8.62□□□□□ -1.03
SCARB2-220ENST00000640076 TRIM71Q2Q1W2 868 aaKnown RBP8.62□□□□□ -1.03
SCARB2-220ENST00000640076 FNDC3BQ53EP0 1204 aaKnown RBP8.62□□□□□ -1.03
SCARB2-220ENST00000640076 RNF219Q5W0B1 726 aaPredicted RBP8.62□□□□□ -1.03
SCARB2-220ENST00000640076 ARMCX5Q6P1M9 558 aa8.62□□□□□ -1.03
SCARB2-220ENST00000640076 BNC2Q6ZN30 1099 aaPredicted RBP8.62□□□□□ -1.03
SCARB2-220ENST00000640076 LRRTM3Q86VH5 581 aa8.62□□□□□ -1.03
SCARB2-220ENST00000640076 C19orf47Q8N9M1 422 aaKnown RBP8.62□□□□□ -1.03
SCARB2-220ENST00000640076 PJA1Q8NG27 643 aa8.62□□□□□ -1.03
SCARB2-220ENST00000640076 TMEM40Q8WWA1 233 aa8.62□□□□□ -1.03
SCARB2-220ENST00000640076 ACO2Q99798 780 aaKnown RBP8.62□□□□□ -1.03
SCARB2-220ENST00000640076 SARGQ9BW04 601 aa8.62□□□□□ -1.03
SCARB2-220ENST00000640076 RHOBTB2Q9BYZ6 727 aa8.62□□□□□ -1.03
SCARB2-220ENST00000640076 CELF4Q9BZC1 486 aaKnown RBP8.62□□□□□ -1.03
SCARB2-220ENST00000640076 GCOM2Q9BZD3 368 aaPredicted RBP8.62□□□□□ -1.03
SCARB2-220ENST00000640076 SENP6Q9GZR1 1112 aaPredicted RBP8.62□□□□□ -1.03
SCARB2-220ENST00000640076 MCOLN1Q9GZU1 580 aa8.62□□□□□ -1.03
SCARB2-220ENST00000640076 HSPBP1Q9NZL4 362 aa8.62□□□□□ -1.03
SCARB2-220ENST00000640076 LUZP4Q9P127 313 aa8.62□□□□□ -1.03
SCARB2-220ENST00000640076 LIMA1Q9UHB6 759 aaKnown RBP8.62□□□□□ -1.03
SCARB2-220ENST00000640076 KCNMB2Q9Y691 235 aa8.62□□□□□ -1.03
SCARB2-220ENST00000640076 CNTNAP2Q9UHC6 1331 aa8.62□□□□□ -1.03
SCARB2-220ENST00000640076 A0A1W2PP55 124 aa8.62□□□□□ -1.03
SCARB2-220ENST00000640076 VSTM5A8MXK1 200 aa8.62□□□□□ -1.03
SCARB2-220ENST00000640076 PLD2O14939 933 aa8.62□□□□□ -1.03
SCARB2-220ENST00000640076 SLC16A3O15427 465 aaKnown RBP8.62□□□□□ -1.03
SCARB2-220ENST00000640076 TOM1L1O75674 476 aa8.62□□□□□ -1.03
SCARB2-220ENST00000640076 ABLIM3O94929 683 aa8.62□□□□□ -1.03
SCARB2-220ENST00000640076 CHRNA1P02708 482 aa8.62□□□□□ -1.03
SCARB2-220ENST00000640076 THPOP40225 353 aa8.62□□□□□ -1.03
SCARB2-220ENST00000640076 MGAT3Q09327 533 aa8.62□□□□□ -1.03
SCARB2-220ENST00000640076 KRT31Q15323 416 aa8.62□□□□□ -1.03
SCARB2-220ENST00000640076 ALFQ53S48 1182 aa8.62□□□□□ -1.03
SCARB2-220ENST00000640076 CEP135Q66GS9 1140 aa8.62□□□□□ -1.03
SCARB2-220ENST00000640076 SLFN12LQ6IEE8 588 aa8.62□□□□□ -1.03
SCARB2-220ENST00000640076 CC2D1AQ6P1N0 951 aaPredicted RBP8.62□□□□□ -1.03
SCARB2-220ENST00000640076 LHFPL2Q6ZUX7 228 aa8.62□□□□□ -1.03
SCARB2-220ENST00000640076 FAM126BQ8IXS8 530 aa8.62□□□□□ -1.03
SCARB2-220ENST00000640076 ANKLE1Q8NAG6 615 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms