RNA–Protein interactions for RNA: ENST00000639628.1

HNRNPU-219, Transcript of heterogeneous nuclear ribonucleoprotein U, humanhuman

TSL 1 (best) BASIC

Gene HNRNPU, Length 4,546 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPU-219ENST00000639628 C1orf131Q8NDD1 294 aaKnown RBP9.04□□□□□ -0.96
HNRNPU-219ENST00000639628 MAGEB18Q96M61 343 aa9.04□□□□□ -0.96
HNRNPU-219ENST00000639628 CGRRF1Q99675 332 aa9.04□□□□□ -0.96
HNRNPU-219ENST00000639628 TSSK1BQ9BXA7 367 aa9.04□□□□□ -0.96
HNRNPU-219ENST00000639628 ZNF518BQ9C0D4 1074 aa9.04□□□□□ -0.96
HNRNPU-219ENST00000639628 SPC25Q9HBM1 224 aa9.04□□□□□ -0.96
HNRNPU-219ENST00000639628 IPO11Q9UI26 975 aaKnown RBP9.04□□□□□ -0.96
HNRNPU-219ENST00000639628 TGFB1I1O43294 461 aa9.04□□□□□ -0.96
HNRNPU-219ENST00000639628 PPFIA2O75334 1257 aa9.04□□□□□ -0.96
HNRNPU-219ENST00000639628 GPC4O75487 556 aa9.04□□□□□ -0.96
HNRNPU-219ENST00000639628 RARAP10276 462 aa9.04□□□□□ -0.96
HNRNPU-219ENST00000639628 RBP3P10745 1247 aa9.04□□□□□ -0.96
HNRNPU-219ENST00000639628 MX2P20592 715 aa9.04□□□□□ -0.96
HNRNPU-219ENST00000639628 PPP3CAQ08209 521 aa9.04□□□□□ -0.96
HNRNPU-219ENST00000639628 SLC15A2Q16348 729 aa9.04□□□□□ -0.96
HNRNPU-219ENST00000639628 NOP9Q86U38 636 aaKnown RBP9.04□□□□□ -0.96
HNRNPU-219ENST00000639628 MAP4K3Q8IVH8 894 aa9.04□□□□□ -0.96
HNRNPU-219ENST00000639628 EPS8L1Q8TE68 723 aa9.04□□□□□ -0.96
HNRNPU-219ENST00000639628 VCPIP1Q96JH7 1222 aa9.04□□□□□ -0.96
HNRNPU-219ENST00000639628 FGFBP2Q9BYJ0 223 aa9.04□□□□□ -0.96
HNRNPU-219ENST00000639628 WWP1Q9H0M0 922 aa9.04□□□□□ -0.96
HNRNPU-219ENST00000639628 DEFB129Q9H1M3 183 aa9.04□□□□□ -0.96
HNRNPU-219ENST00000639628 GOLGA8RI6L899 631 aa9.04□□□□□ -0.96
HNRNPU-219ENST00000639628 ADAMTS3O15072 1205 aa9.04□□□□□ -0.96
HNRNPU-219ENST00000639628 FSBPO95073 299 aa9.04□□□□□ -0.96
HNRNPU-219ENST00000639628 SUPT20HL2P0C7V6 817 aa9.04□□□□□ -0.96
HNRNPU-219ENST00000639628 NCF2P19878 526 aaPredicted RBP9.04□□□□□ -0.96
HNRNPU-219ENST00000639628 CLK2P49760 499 aaKnown RBP9.04□□□□□ -0.96
HNRNPU-219ENST00000639628 RAD23BP54727 409 aa9.04□□□□□ -0.96
HNRNPU-219ENST00000639628 GEMIN4P57678 1058 aaKnown RBP9.04□□□□□ -0.96
HNRNPU-219ENST00000639628 ZNF200P98182 395 aaPredicted RBP9.04□□□□□ -0.96
HNRNPU-219ENST00000639628 TAF12Q16514 161 aa9.04□□□□□ -0.96
HNRNPU-219ENST00000639628 TTC16Q8NEE8 873 aa9.04□□□□□ -0.96
HNRNPU-219ENST00000639628 WDR18Q9BV38 432 aa9.04□□□□□ -0.96
HNRNPU-219ENST00000639628 FRMD8Q9BZ67 464 aaPredicted RBP9.04□□□□□ -0.96
HNRNPU-219ENST00000639628 DHX35Q9H5Z1 703 aaKnown RBP9.04□□□□□ -0.96
HNRNPU-219ENST00000639628 SPATS2LQ9NUQ6 558 aaKnown RBP9.04□□□□□ -0.96
HNRNPU-219ENST00000639628 STAP1Q9ULZ2 295 aa9.04□□□□□ -0.96
HNRNPU-219ENST00000639628 IGF2BP3O00425 579 aaKnown RBP eCLIP9.03□□□□□ -0.962e-8■□□□□ 8.3
HNRNPU-219ENST00000639628 LSM8O95777 96 aaKnown RBP9.03□□□□□ -0.96
HNRNPU-219ENST00000639628 WEE2P0C1S8 567 aa9.03□□□□□ -0.96
HNRNPU-219ENST00000639628 RBP5P82980 135 aa9.03□□□□□ -0.96
HNRNPU-219ENST00000639628 C1QBPQ07021 282 aaKnown RBP9.03□□□□□ -0.96
HNRNPU-219ENST00000639628 PSMD6Q15008 389 aa9.03□□□□□ -0.96
HNRNPU-219ENST00000639628 MORF4L2Q15014 288 aa9.03□□□□□ -0.96
HNRNPU-219ENST00000639628 RPS6KA2Q15349 733 aa9.03□□□□□ -0.96
HNRNPU-219ENST00000639628 NFIL3Q16649 462 aa9.03□□□□□ -0.96
HNRNPU-219ENST00000639628 TFDP3Q5H9I0 405 aa9.03□□□□□ -0.96
HNRNPU-219ENST00000639628 TATDN1Q6P1N9 297 aa9.03□□□□□ -0.96
HNRNPU-219ENST00000639628 RNF169Q8NCN4 708 aa9.03□□□□□ -0.96
HNRNPU-219ENST00000639628 SPATA18Q8TC71 538 aa9.03□□□□□ -0.96
HNRNPU-219ENST00000639628 TATDN2Q93075 761 aa9.03□□□□□ -0.96
HNRNPU-219ENST00000639628 CENPTQ96BT3 561 aa9.03□□□□□ -0.96
HNRNPU-219ENST00000639628 SERPINI1Q99574 410 aa9.03□□□□□ -0.96
HNRNPU-219ENST00000639628 SH3GL2Q99962 352 aa9.03□□□□□ -0.96
HNRNPU-219ENST00000639628 KIAA1683Q9H0B3 1180 aa9.03□□□□□ -0.96
HNRNPU-219ENST00000639628 FAM49AQ9H0Q0 323 aaPredicted RBP9.03□□□□□ -0.96
HNRNPU-219ENST00000639628 DNAJC5Q9H3Z4 198 aa9.03□□□□□ -0.96
HNRNPU-219ENST00000639628 SMARCAD1Q9H4L7 1026 aa9.03□□□□□ -0.96
HNRNPU-219ENST00000639628 NOD2Q9HC29 1040 aa9.03□□□□□ -0.96
HNRNPU-219ENST00000639628 NPHS2Q9NP85 383 aa9.03□□□□□ -0.96
HNRNPU-219ENST00000639628 SMYD2Q9NRG4 433 aa9.03□□□□□ -0.96
HNRNPU-219ENST00000639628 RAB6BQ9NRW1 208 aa9.03□□□□□ -0.96
HNRNPU-219ENST00000639628 FAM53CQ9NYF3 392 aa9.03□□□□□ -0.96
HNRNPU-219ENST00000639628 PAK5Q9P286 719 aa9.03□□□□□ -0.96
HNRNPU-219ENST00000639628 KLHL8Q9P2G9 620 aaPredicted RBP9.03□□□□□ -0.96
HNRNPU-219ENST00000639628 PCYOX1Q9UHG3 505 aa9.03□□□□□ -0.96
HNRNPU-219ENST00000639628 VAV3Q9UKW4 847 aa9.03□□□□□ -0.96
HNRNPU-219ENST00000639628 COL14A1Q05707 1796 aaKnown RBP9.03□□□□□ -0.96
HNRNPU-219ENST00000639628 MYH2Q9UKX2 1941 aa9.03□□□□□ -0.96
HNRNPU-219ENST00000639628 OGTO15294 1046 aa9.03□□□□□ -0.96
HNRNPU-219ENST00000639628 KCNN4O15554 427 aa9.03□□□□□ -0.96
HNRNPU-219ENST00000639628 MMP14P50281 582 aa9.03□□□□□ -0.96
HNRNPU-219ENST00000639628 TPD52P55327 224 aaPredicted RBP9.03□□□□□ -0.96
HNRNPU-219ENST00000639628 MAP7Q14244 749 aa9.03□□□□□ -0.96
HNRNPU-219ENST00000639628 C2CD6Q53TS8 623 aa9.03□□□□□ -0.96
HNRNPU-219ENST00000639628 ANKRD20A8PQ5CZ79 823 aa9.03□□□□□ -0.96
HNRNPU-219ENST00000639628 ATF7IP2Q5U623 682 aa9.03□□□□□ -0.96
HNRNPU-219ENST00000639628 FKBP1CQ5VVH2 108 aa9.03□□□□□ -0.96
HNRNPU-219ENST00000639628 LVRNQ6Q4G3 990 aa9.03□□□□□ -0.96
HNRNPU-219ENST00000639628 PTF1AQ7RTS3 328 aa9.03□□□□□ -0.96
HNRNPU-219ENST00000639628 PACS2Q86VP3 889 aa9.03□□□□□ -0.96
HNRNPU-219ENST00000639628 ABRAQ8N0Z2 381 aa9.03□□□□□ -0.96
HNRNPU-219ENST00000639628 KCNV2Q8TDN2 545 aa9.03□□□□□ -0.96
HNRNPU-219ENST00000639628 KRT35Q92764 455 aa9.03□□□□□ -0.96
HNRNPU-219ENST00000639628 SHISA4Q96DD7 197 aa9.03□□□□□ -0.96
HNRNPU-219ENST00000639628 KIF12Q96FN5 646 aa9.03□□□□□ -0.96
HNRNPU-219ENST00000639628 MMP19Q99542 508 aa9.03□□□□□ -0.96
HNRNPU-219ENST00000639628 NUF2Q9BZD4 464 aa9.03□□□□□ -0.96
HNRNPU-219ENST00000639628 SLC13A1Q9BZW2 595 aa9.03□□□□□ -0.96
HNRNPU-219ENST00000639628 DCLK3Q9C098 648 aa9.03□□□□□ -0.96
HNRNPU-219ENST00000639628 BATF3Q9NR55 127 aa9.03□□□□□ -0.96
HNRNPU-219ENST00000639628 TAS2R14Q9NYV8 317 aa9.03□□□□□ -0.96
HNRNPU-219ENST00000639628 AGAP1Q9UPQ3 857 aa9.03□□□□□ -0.96
HNRNPU-219ENST00000639628 NUP188Q5SRE5 1749 aa9.03□□□□□ -0.96
HNRNPU-219ENST00000639628 ASB14A6NK59 587 aa9.03□□□□□ -0.96
HNRNPU-219ENST00000639628 HUS1O60921 280 aa9.03□□□□□ -0.96
HNRNPU-219ENST00000639628 ZNF189O75820 626 aaPredicted RBP9.03□□□□□ -0.96
HNRNPU-219ENST00000639628 HSPA4LO95757 839 aa9.03□□□□□ -0.96
HNRNPU-219ENST00000639628 VCAM1P19320 739 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms