RNA–Protein interactions for RNA: ENST00000638889.1

CCDC7-211, Transcript of coiled-coil domain containing 7, humanhuman

TSL 3

Gene CCDC7, Length 423 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-211ENST00000638889 DDB2Q92466 427 aa4.74□□□□□ -1.65
CCDC7-211ENST00000638889 PBKQ96KB5 322 aa4.74□□□□□ -1.65
CCDC7-211ENST00000638889 ALG8Q9BVK2 526 aa4.74□□□□□ -1.65
CCDC7-211ENST00000638889 SEMA4CQ9C0C4 833 aa4.74□□□□□ -1.65
CCDC7-211ENST00000638889 CALCOCO1Q9P1Z2 691 aa4.74□□□□□ -1.65
CCDC7-211ENST00000638889 TTLL1O95922 423 aa4.73□□□□□ -1.65
CCDC7-211ENST00000638889 NPTX2P47972 431 aa4.73□□□□□ -1.65
CCDC7-211ENST00000638889 HNRNPMP52272 730 aaKnown RBP eCLIP4.73□□□□□ -1.652e-6■■■■■ 31.6
CCDC7-211ENST00000638889 SLC16A1P53985 500 aa4.73□□□□□ -1.65
CCDC7-211ENST00000638889 FLYWCH1Q4VC44 716 aa4.73□□□□□ -1.65
CCDC7-211ENST00000638889 PPP4R3AQ6IN85 833 aa4.73□□□□□ -1.65
CCDC7-211ENST00000638889 RASAL3Q86YV0 1011 aa4.73□□□□□ -1.65
CCDC7-211ENST00000638889 PDPRQ8NCN5 879 aa4.73□□□□□ -1.65
CCDC7-211ENST00000638889 COG1Q8WTW3 980 aa4.73□□□□□ -1.65
CCDC7-211ENST00000638889 IMPG2Q9BZV3 1241 aa4.73□□□□□ -1.65
CCDC7-211ENST00000638889 USP35Q9P2H5 1018 aa4.73□□□□□ -1.65
CCDC7-211ENST00000638889 NIPSNAP3AQ9UFN0 247 aaPredicted RBP4.73□□□□□ -1.65
CCDC7-211ENST00000638889 PADI4Q9UM07 663 aa4.73□□□□□ -1.65
CCDC7-211ENST00000638889 ADGRA2Q96PE1 1338 aa4.72□□□□□ -1.65
CCDC7-211ENST00000638889 VWC2LB2RUY7 222 aa4.72□□□□□ -1.65
CCDC7-211ENST00000638889 CD1AP06126 327 aa4.72□□□□□ -1.65
CCDC7-211ENST00000638889 MC2RQ01718 297 aa4.72□□□□□ -1.65
CCDC7-211ENST00000638889 EIF2B5Q13144 721 aaKnown RBP4.72□□□□□ -1.65
CCDC7-211ENST00000638889 GRM1Q13255 1194 aa4.72□□□□□ -1.65
CCDC7-211ENST00000638889 TAPT1Q6NXT6 567 aa4.72□□□□□ -1.65
CCDC7-211ENST00000638889 PDSS2Q86YH6 399 aa4.72□□□□□ -1.65
CCDC7-211ENST00000638889 SLC17A8Q8NDX2 589 aa4.72□□□□□ -1.65
CCDC7-211ENST00000638889 NSUN7Q8NE18 718 aaKnown RBP4.72□□□□□ -1.65
CCDC7-211ENST00000638889 TMIEQ8NEW7 156 aa4.72□□□□□ -1.65
CCDC7-211ENST00000638889 POC1BQ8TC44 478 aa4.72□□□□□ -1.65
CCDC7-211ENST00000638889 LRIG1Q96JA1 1093 aa4.72□□□□□ -1.65
CCDC7-211ENST00000638889 MRGPRX4Q96LA9 322 aa4.72□□□□□ -1.65
CCDC7-211ENST00000638889 TRIB1Q96RU8 372 aa4.72□□□□□ -1.65
CCDC7-211ENST00000638889 OSBPL9Q96SU4 736 aa4.72□□□□□ -1.65
CCDC7-211ENST00000638889 SMOQ99835 787 aa4.72□□□□□ -1.65
CCDC7-211ENST00000638889 TMX1Q9H3N1 280 aa4.72□□□□□ -1.65
CCDC7-211ENST00000638889 ST3GAL5Q9UNP4 418 aa4.72□□□□□ -1.65
CCDC7-211ENST00000638889 PCDHA13Q9Y5I0 950 aa4.72□□□□□ -1.65
CCDC7-211ENST00000638889 PHLDB1Q86UU1 1377 aa4.71□□□□□ -1.66
CCDC7-211ENST00000638889 A0A0B4J269 797 aa4.71□□□□□ -1.66
CCDC7-211ENST00000638889 TRIAP1O43715 76 aa4.71□□□□□ -1.66
CCDC7-211ENST00000638889 NDUFS2O75306 463 aa4.71□□□□□ -1.66
CCDC7-211ENST00000638889 RPLP2P05387 115 aaKnown RBP4.71□□□□□ -1.66
CCDC7-211ENST00000638889 PTGER1P34995 402 aa4.71□□□□□ -1.66
CCDC7-211ENST00000638889 ZNF280AP59817 542 aaPredicted RBP4.71□□□□□ -1.66
CCDC7-211ENST00000638889 TFF2Q03403 129 aa4.71□□□□□ -1.66
CCDC7-211ENST00000638889 TLE1Q04724 770 aa4.71□□□□□ -1.66
CCDC7-211ENST00000638889 TUBB3Q13509 450 aa4.71□□□□□ -1.66
CCDC7-211ENST00000638889 CLUL1Q15846 466 aa4.71□□□□□ -1.66
CCDC7-211ENST00000638889 PLAC9Q5JTB6 97 aa4.71□□□□□ -1.66
CCDC7-211ENST00000638889 GADL1Q6ZQY3 521 aa4.71□□□□□ -1.66
CCDC7-211ENST00000638889 FAM9AQ8IZU1 332 aaPredicted RBP4.71□□□□□ -1.66
CCDC7-211ENST00000638889 VGLL2Q8N8G2 317 aa4.71□□□□□ -1.66
CCDC7-211ENST00000638889 RFKQ969G6 155 aa4.71□□□□□ -1.66
CCDC7-211ENST00000638889 MAN1C1Q9NR34 630 aa4.71□□□□□ -1.66
CCDC7-211ENST00000638889 SIDT1Q9NXL6 827 aaKnown RBP4.71□□□□□ -1.66
CCDC7-211ENST00000638889 EHD3Q9NZN3 535 aa4.71□□□□□ -1.66
CCDC7-211ENST00000638889 SLC45A2Q9UMX9 530 aa4.71□□□□□ -1.66
CCDC7-211ENST00000638889 TMA7Q9Y2S6 64 aaKnown RBP4.71□□□□□ -1.66
CCDC7-211ENST00000638889 SOAT2O75908 522 aa4.7□□□□□ -1.66
CCDC7-211ENST00000638889 CLSTN1O94985 981 aa4.7□□□□□ -1.66
CCDC7-211ENST00000638889 CNGA1P29973 690 aa4.7□□□□□ -1.66
CCDC7-211ENST00000638889 CCT8P50990 548 aa4.7□□□□□ -1.66
CCDC7-211ENST00000638889 INAVAQ3KP66 663 aa4.7□□□□□ -1.66
CCDC7-211ENST00000638889 SLC44A4Q53GD3 710 aa4.7□□□□□ -1.66
CCDC7-211ENST00000638889 MTX3Q5HYI7 312 aa4.7□□□□□ -1.66
CCDC7-211ENST00000638889 C11orf87Q6NUJ2 197 aa4.7□□□□□ -1.66
CCDC7-211ENST00000638889 ATL2Q8NHH9 583 aa4.7□□□□□ -1.66
CCDC7-211ENST00000638889 JADE3Q92613 823 aa4.7□□□□□ -1.66
CCDC7-211ENST00000638889 SCAMP4Q969E2 229 aa4.7□□□□□ -1.66
CCDC7-211ENST00000638889 RAB24Q969Q5 203 aa4.7□□□□□ -1.66
CCDC7-211ENST00000638889 PUS7LQ9H0K6 701 aaKnown RBP4.7□□□□□ -1.66
CCDC7-211ENST00000638889 RLIMQ9NVW2 624 aa4.7□□□□□ -1.66
CCDC7-211ENST00000638889 TUBD1Q9UJT1 453 aa4.7□□□□□ -1.66
CCDC7-211ENST00000638889 IPPQ9Y573 584 aa4.7□□□□□ -1.66
CCDC7-211ENST00000638889 NR2E3Q9Y5X4 410 aa4.7□□□□□ -1.66
CCDC7-211ENST00000638889 TARM1B6A8C7 271 aa4.69□□□□□ -1.66
CCDC7-211ENST00000638889 F5H697 171 aa4.69□□□□□ -1.66
CCDC7-211ENST00000638889 HTRA2O43464 458 aaPredicted RBP4.69□□□□□ -1.66
CCDC7-211ENST00000638889 LATS1O95835 1130 aa4.69□□□□□ -1.66
CCDC7-211ENST00000638889 PRR35P0CG20 571 aa4.69□□□□□ -1.66
CCDC7-211ENST00000638889 NR2F6P10588 404 aa4.69□□□□□ -1.66
CCDC7-211ENST00000638889 DRD4P21917 467 aa4.69□□□□□ -1.66
CCDC7-211ENST00000638889 CERS1P27544 350 aa4.69□□□□□ -1.66
CCDC7-211ENST00000638889 NDUFV1P49821 464 aa4.69□□□□□ -1.66
CCDC7-211ENST00000638889 BMPR2Q13873 1038 aa4.69□□□□□ -1.66
CCDC7-211ENST00000638889 SDE2Q6IQ49 451 aa4.69□□□□□ -1.66
CCDC7-211ENST00000638889 CLPTM1LQ96KA5 538 aa4.69□□□□□ -1.66
CCDC7-211ENST00000638889 SERTAD4Q9NUC0 356 aa4.69□□□□□ -1.66
CCDC7-211ENST00000638889 E9PLN8 166 aa4.68□□□□□ -1.66
CCDC7-211ENST00000638889 POLRMTO00411 1230 aaKnown RBP4.68□□□□□ -1.66
CCDC7-211ENST00000638889 IKBKBO14920 756 aa4.68□□□□□ -1.66
CCDC7-211ENST00000638889 KCNAB3O43448 404 aa4.68□□□□□ -1.66
CCDC7-211ENST00000638889 CHEK2O96017 543 aa4.68□□□□□ -1.66
CCDC7-211ENST00000638889 HNRNPCP07910 306 aaKnown RBP eCLIP4.68□□□□□ -1.66
CCDC7-211ENST00000638889 ZFXP17010 805 aaPredicted RBP4.68□□□□□ -1.66
CCDC7-211ENST00000638889 LPOP22079 712 aaPredicted RBP4.68□□□□□ -1.66
CCDC7-211ENST00000638889 KELP23276 732 aa4.68□□□□□ -1.66
CCDC7-211ENST00000638889 CYP2C19P33261 490 aa4.68□□□□□ -1.66
CCDC7-211ENST00000638889 TUBA4AP68366 448 aa4.68□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms