RNA–Protein interactions for RNA: ENST00000638142.2

SYNGAP1-227, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 2,499 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-227ENST00000638142 PASD1Q8IV76 773 aa21.29■■□□□ 1
SYNGAP1-227ENST00000638142 ANKLE1Q8NAG6 615 aa21.29■■□□□ 1
SYNGAP1-227ENST00000638142 FEZF2Q8TBJ5 459 aa21.29■■□□□ 1
SYNGAP1-227ENST00000638142 KIAA1683Q9H0B3 1180 aa21.29■■□□□ 1
SYNGAP1-227ENST00000638142 QTRT2Q9H974 415 aaKnown RBP21.29■■□□□ 1
SYNGAP1-227ENST00000638142 PGAP2Q9UHJ9 254 aa21.29■■□□□ 1
SYNGAP1-227ENST00000638142 KCNG1Q9UIX4 513 aa21.29■■□□□ 1
SYNGAP1-227ENST00000638142 PCDHB4Q9Y5E5 795 aa21.29■■□□□ 1
SYNGAP1-227ENST00000638142 BRWD3Q6RI45 1802 aa21.29■■□□□ 1
SYNGAP1-227ENST00000638142 MAFGO15525 162 aa21.29■■□□□ 1
SYNGAP1-227ENST00000638142 CFHP08603 1231 aa21.29■■□□□ 1
SYNGAP1-227ENST00000638142 GCAP28676 217 aa21.29■■□□□ 1
SYNGAP1-227ENST00000638142 EAPPQ56P03 285 aaPredicted RBP21.29■■□□□ 1
SYNGAP1-227ENST00000638142 SPOPLQ6IQ16 392 aa21.29■■□□□ 1
SYNGAP1-227ENST00000638142 DENND1AQ8TEH3 1009 aa21.29■■□□□ 1
SYNGAP1-227ENST00000638142 FAXDC2Q96IV6 333 aa21.29■■□□□ 1
SYNGAP1-227ENST00000638142 RAB3IPQ96QF0 476 aaPredicted RBP21.29■■□□□ 1
SYNGAP1-227ENST00000638142 PPCSQ9HAB8 311 aa21.29■■□□□ 1
SYNGAP1-227ENST00000638142 SMG5Q9UPR3 1016 aaKnown RBP21.29■■□□□ 1
SYNGAP1-227ENST00000638142 PLSCR1O15162 318 aa21.28■■□□□ 1
SYNGAP1-227ENST00000638142 ZBED4O75132 1171 aa21.28■■□□□ 1
SYNGAP1-227ENST00000638142 ATP5HO75947 161 aa21.28■■□□□ 1
SYNGAP1-227ENST00000638142 TJP3O95049 919 aa21.28■■□□□ 1
SYNGAP1-227ENST00000638142 VNN1O95497 513 aa21.28■■□□□ 1
SYNGAP1-227ENST00000638142 ATP11AP98196 1134 aa21.28■■□□□ 1
SYNGAP1-227ENST00000638142 SPARCL1Q14515 664 aa21.28■■□□□ 1
SYNGAP1-227ENST00000638142 TMEM270Q6UE05 265 aa21.28■■□□□ 1
SYNGAP1-227ENST00000638142 PRUNE1Q86TP1 453 aa21.28■■□□□ 1
SYNGAP1-227ENST00000638142 CNTN6Q9UQ52 1028 aa21.28■■□□□ 1
SYNGAP1-227ENST00000638142 STK38LQ9Y2H1 464 aa21.28■■□□□ 1
SYNGAP1-227ENST00000638142 CTDP1Q9Y5B0 961 aaPredicted RBP21.28■■□□□ 1
SYNGAP1-227ENST00000638142 STYXL1Q9Y6J8 313 aa21.28■■□□□ 1
SYNGAP1-227ENST00000638142 NDC80O14777 642 aa21.28■■□□□ 1
SYNGAP1-227ENST00000638142 TBXAS1P24557 533 aaPredicted RBP21.28■■□□□ 1
SYNGAP1-227ENST00000638142 CCND2P30279 289 aa21.28■■□□□ 1
SYNGAP1-227ENST00000638142 POLGP54098 1239 aaPredicted RBP21.28■■□□□ 1
SYNGAP1-227ENST00000638142 YARSP54577 528 aaKnown RBP21.28■■□□□ 1
SYNGAP1-227ENST00000638142 MCL1Q07820 350 aa21.28■■□□□ 1
SYNGAP1-227ENST00000638142 SETDB1Q15047 1291 aa21.28■■□□□ 1
SYNGAP1-227ENST00000638142 FAM47EQ6ZV65 393 aa21.28■■□□□ 1
SYNGAP1-227ENST00000638142 VSIG10LQ86VR7 867 aa21.28■■□□□ 1
SYNGAP1-227ENST00000638142 MTMR14Q8NCE2 650 aa21.28■■□□□ 1
SYNGAP1-227ENST00000638142 PRCCQ92733 491 aaPredicted RBP21.28■■□□□ 1
SYNGAP1-227ENST00000638142 THOC1Q96FV9 657 aaKnown RBP21.28■■□□□ 1
SYNGAP1-227ENST00000638142 POLR3FQ9H1D9 316 aaPredicted RBP21.28■■□□□ 1
SYNGAP1-227ENST00000638142 DNPEPQ9ULA0 475 aa21.28■■□□□ 1
SYNGAP1-227ENST00000638142 WDR81Q562E7 1941 aa21.27■■□□□ 1
SYNGAP1-227ENST00000638142 WFS1O76024 890 aa21.27■■□□□ 1
SYNGAP1-227ENST00000638142 PSAPP07602 524 aa21.27■■□□□ 1
SYNGAP1-227ENST00000638142 MORF4L2Q15014 288 aa21.27■■□□□ 1
SYNGAP1-227ENST00000638142 ALLCQ8N6M5 410 aa21.27■■□□□ 1
SYNGAP1-227ENST00000638142 RBBP8NLQ8NC74 664 aaPredicted RBP21.27■■□□□ 1
SYNGAP1-227ENST00000638142 SLITRK1Q96PX8 696 aa21.27■■□□□ 1
SYNGAP1-227ENST00000638142 PAIP2Q9BPZ3 127 aaKnown RBP21.27■■□□□ 1
SYNGAP1-227ENST00000638142 FHDC1Q9C0D6 1143 aaPredicted RBP21.27■■□□□ 1
SYNGAP1-227ENST00000638142 TRABDQ9H4I3 376 aa21.27■■□□□ 1
SYNGAP1-227ENST00000638142 APOBEC3GQ9HC16 384 aaKnown RBP21.27■■□□□ 1
SYNGAP1-227ENST00000638142 AGO2Q9UKV8 859 aaKnown RBP21.27■■□□□ 1
SYNGAP1-227ENST00000638142 ZNF148Q9UQR1 794 aa21.27■■□□□ 1
SYNGAP1-227ENST00000638142 USH1CQ9Y6N9 552 aa21.27■■□□□ 1
SYNGAP1-227ENST00000638142 NLRP11P59045 1033 aaKnown RBP21.27■□□□□ 0.99
SYNGAP1-227ENST00000638142 CCDC142Q17RM4 750 aa21.27■□□□□ 0.99
SYNGAP1-227ENST00000638142 LRRC38Q5VT99 294 aa21.27■□□□□ 0.99
SYNGAP1-227ENST00000638142 ETNK1Q9HBU6 452 aa21.27■□□□□ 0.99
SYNGAP1-227ENST00000638142 CYP26B1Q9NR63 512 aa21.27■□□□□ 0.99
SYNGAP1-227ENST00000638142 SEPT9Q9UHD8 586 aaPredicted RBP21.27■□□□□ 0.99
SYNGAP1-227ENST00000638142 TRIM33Q9UPN9 1127 aa21.27■□□□□ 0.99
SYNGAP1-227ENST00000638142 DRG1Q9Y295 367 aaKnown RBP21.27■□□□□ 0.99
SYNGAP1-227ENST00000638142 PAX7P23759 505 aa21.26■□□□□ 0.99
SYNGAP1-227ENST00000638142 ARSEP51690 589 aa21.26■□□□□ 0.99
SYNGAP1-227ENST00000638142 WNT7BP56706 349 aa21.26■□□□□ 0.99
SYNGAP1-227ENST00000638142 RASA2Q15283 850 aa21.26■□□□□ 0.99
SYNGAP1-227ENST00000638142 POTEAQ6S8J7 498 aa21.26■□□□□ 0.99
SYNGAP1-227ENST00000638142 SMC6Q96SB8 1091 aa21.26■□□□□ 0.99
SYNGAP1-227ENST00000638142 TRIM6Q9C030 488 aaPredicted RBP21.26■□□□□ 0.99
SYNGAP1-227ENST00000638142 PHTF1Q9UMS5 762 aa21.26■□□□□ 0.99
SYNGAP1-227ENST00000638142 ZBTB12Q9Y330 459 aaPredicted RBP21.26■□□□□ 0.99
SYNGAP1-227ENST00000638142 DYNC1LI1Q9Y6G9 523 aaKnown RBP21.26■□□□□ 0.99
SYNGAP1-227ENST00000638142 PTPRJQ12913 1337 aa21.26■□□□□ 0.99
SYNGAP1-227ENST00000638142 A8MUI8 341 aa21.26■□□□□ 0.99
SYNGAP1-227ENST00000638142 SPAG7O75391 227 aa21.26■□□□□ 0.99
SYNGAP1-227ENST00000638142 PECAM1P16284 738 aaPredicted RBP21.26■□□□□ 0.99
SYNGAP1-227ENST00000638142 PDK4Q16654 411 aa21.26■□□□□ 0.99
SYNGAP1-227ENST00000638142 SWSAP1Q6NVH7 229 aa21.26■□□□□ 0.99
SYNGAP1-227ENST00000638142 GLIS1Q8NBF1 620 aa21.26■□□□□ 0.99
SYNGAP1-227ENST00000638142 KCNN1Q92952 543 aa21.26■□□□□ 0.99
SYNGAP1-227ENST00000638142 KRT1P04264 644 aa21.25■□□□□ 0.99
SYNGAP1-227ENST00000638142 KRT10P13645 584 aa21.25■□□□□ 0.99
SYNGAP1-227ENST00000638142 KCNA2P16389 499 aa21.25■□□□□ 0.99
SYNGAP1-227ENST00000638142 ACOT2P49753 483 aa21.25■□□□□ 0.99
SYNGAP1-227ENST00000638142 PRKCEQ02156 737 aa21.25■□□□□ 0.99
SYNGAP1-227ENST00000638142 DNAJC3Q13217 504 aa21.25■□□□□ 0.99
SYNGAP1-227ENST00000638142 MOGSQ13724 837 aa21.25■□□□□ 0.99
SYNGAP1-227ENST00000638142 PARP6Q2NL67 630 aa21.25■□□□□ 0.99
SYNGAP1-227ENST00000638142 KAZNQ674X7 775 aa21.25■□□□□ 0.99
SYNGAP1-227ENST00000638142 MYLK2Q9H1R3 596 aa21.25■□□□□ 0.99
SYNGAP1-227ENST00000638142 LRMDAQ9H2I8 198 aa21.25■□□□□ 0.99
SYNGAP1-227ENST00000638142 TMEM191CA6NGB0 347 aa21.24■□□□□ 0.99
SYNGAP1-227ENST00000638142 POC1B-GALNT4F8VUJ3 575 aa21.24■□□□□ 0.99
SYNGAP1-227ENST00000638142 PI4K2BG5E9Z4 385 aa21.24■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms