RNA–Protein interactions for RNA: ENST00000637667.1

CLN6-222, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 1 (best)

Gene CLN6, Length 874 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-222ENST00000637667 ZFP14Q9HCL3 533 aa21.75■■□□□ 1.07
CLN6-222ENST00000637667 TBC1D7Q9P0N9 293 aa21.75■■□□□ 1.07
CLN6-222ENST00000637667 EXOC7Q9UPT5 735 aa21.75■■□□□ 1.07
CLN6-222ENST00000637667 CACNA1IQ9P0X4 2223 aa21.74■■□□□ 1.07
CLN6-222ENST00000637667 LRRN2O75325 713 aa21.74■■□□□ 1.07
CLN6-222ENST00000637667 MOSPD3O75425 235 aa21.74■■□□□ 1.07
CLN6-222ENST00000637667 GLULP15104 373 aa21.74■■□□□ 1.07
CLN6-222ENST00000637667 KCNA1Q09470 495 aa21.74■■□□□ 1.07
CLN6-222ENST00000637667 PLD1Q13393 1074 aa21.74■■□□□ 1.07
CLN6-222ENST00000637667 L1TD1Q5T7N2 865 aaKnown RBP21.74■■□□□ 1.07
CLN6-222ENST00000637667 CENPPQ6IPU0 288 aa21.74■■□□□ 1.07
CLN6-222ENST00000637667 ARMCX5Q6P1M9 558 aa21.74■■□□□ 1.07
CLN6-222ENST00000637667 CRELD2Q6UXH1 353 aaPredicted RBP21.74■■□□□ 1.07
CLN6-222ENST00000637667 ATAD1Q8NBU5 361 aa21.74■■□□□ 1.07
CLN6-222ENST00000637667 ACCSQ96QU6 501 aa21.74■■□□□ 1.07
CLN6-222ENST00000637667 PANK2Q9BZ23 570 aa21.74■■□□□ 1.07
CLN6-222ENST00000637667 DPP3Q9NY33 737 aa21.74■■□□□ 1.07
CLN6-222ENST00000637667 VPS13AQ96RL7 3174 aa21.74■■□□□ 1.07
CLN6-222ENST00000637667 A0A087X0B3 334 aa21.73■■□□□ 1.07
CLN6-222ENST00000637667 MTMR11A4FU01 709 aa21.73■■□□□ 1.07
CLN6-222ENST00000637667 GCNT3O95395 438 aa21.73■■□□□ 1.07
CLN6-222ENST00000637667 CYP11A1P05108 521 aa21.73■■□□□ 1.07
CLN6-222ENST00000637667 IDEP14735 1019 aa21.73■■□□□ 1.07
CLN6-222ENST00000637667 GJA1P17302 382 aa21.73■■□□□ 1.07
CLN6-222ENST00000637667 NASPP49321 788 aaPredicted RBP21.73■■□□□ 1.07
CLN6-222ENST00000637667 EPHB3P54753 998 aa21.73■■□□□ 1.07
CLN6-222ENST00000637667 UBXN2BQ14CS0 331 aa21.73■■□□□ 1.07
CLN6-222ENST00000637667 C1orf210Q8IVY1 113 aa21.73■■□□□ 1.07
CLN6-222ENST00000637667 SMARCD2Q92925 531 aa21.73■■□□□ 1.07
CLN6-222ENST00000637667 ZSWIM3Q96MP5 696 aa21.73■■□□□ 1.07
CLN6-222ENST00000637667 TMEM209Q96SK2 561 aa21.73■■□□□ 1.07
CLN6-222ENST00000637667 OLFML3Q9NRN5 406 aa21.73■■□□□ 1.07
CLN6-222ENST00000637667 DSEQ9UL01 958 aa21.73■■□□□ 1.07
CLN6-222ENST00000637667 SPTBN4Q9H254 2564 aa21.72■■□□□ 1.07
CLN6-222ENST00000637667 IL18RAPO95256 599 aa21.72■■□□□ 1.07
CLN6-222ENST00000637667 ALDH1A3P47895 512 aa21.72■■□□□ 1.07
CLN6-222ENST00000637667 TAF6P49848 677 aa21.72■■□□□ 1.07
CLN6-222ENST00000637667 GRM2Q14416 872 aa21.72■■□□□ 1.07
CLN6-222ENST00000637667 TPRG1Q6ZUI0 275 aa21.72■■□□□ 1.07
CLN6-222ENST00000637667 EFCAB13Q8IY85 973 aa21.72■■□□□ 1.07
CLN6-222ENST00000637667 OR10T2Q8NGX3 314 aa21.72■■□□□ 1.07
CLN6-222ENST00000637667 SHKBP1Q8TBC3 707 aa21.72■■□□□ 1.07
CLN6-222ENST00000637667 LRRC3Q9BY71 257 aa21.72■■□□□ 1.07
CLN6-222ENST00000637667 OSBPL6Q9BZF3 934 aa21.72■■□□□ 1.07
CLN6-222ENST00000637667 DNAJC25Q9H1X3 360 aa21.72■■□□□ 1.07
CLN6-222ENST00000637667 LTB4R2Q9NPC1 389 aa21.72■■□□□ 1.07
CLN6-222ENST00000637667 SLC27A5Q9Y2P5 690 aa21.72■■□□□ 1.07
CLN6-222ENST00000637667 MTF2Q9Y483 593 aaPredicted RBP21.72■■□□□ 1.07
CLN6-222ENST00000637667 PCDHB13Q9Y5F0 798 aa21.72■■□□□ 1.07
CLN6-222ENST00000637667 CFAP54Q96N23 3096 aa21.72■■□□□ 1.07
CLN6-222ENST00000637667 MYO15AQ9UKN7 3530 aa21.71■■□□□ 1.07
CLN6-222ENST00000637667 FRMD3A2A2Y4 597 aa21.71■■□□□ 1.07
CLN6-222ENST00000637667 FAM170BA6NMN3 283 aa21.71■■□□□ 1.07
CLN6-222ENST00000637667 CYB561D2O14569 222 aa21.71■■□□□ 1.07
CLN6-222ENST00000637667 CD72P21854 359 aa21.71■■□□□ 1.07
CLN6-222ENST00000637667 CASP5P51878 434 aa21.71■■□□□ 1.07
CLN6-222ENST00000637667 ALCAMQ13740 583 aa21.71■■□□□ 1.07
CLN6-222ENST00000637667 STK38Q15208 465 aa21.71■■□□□ 1.07
CLN6-222ENST00000637667 TEAD2Q15562 447 aa21.71■■□□□ 1.07
CLN6-222ENST00000637667 TMC8Q8IU68 726 aa21.71■■□□□ 1.07
CLN6-222ENST00000637667 TTC9BQ8N6N2 239 aa21.71■■□□□ 1.07
CLN6-222ENST00000637667 ZSCAN18Q8TBC5 510 aaPredicted RBP21.71■■□□□ 1.07
CLN6-222ENST00000637667 DNASE1L2Q92874 299 aa21.71■■□□□ 1.07
CLN6-222ENST00000637667 FAM213AQ9BRX8 229 aa21.71■■□□□ 1.07
CLN6-222ENST00000637667 TRMT61BQ9BVS5 477 aaKnown RBP21.71■■□□□ 1.07
CLN6-222ENST00000637667 BCO2Q9BYV7 579 aa21.71■■□□□ 1.07
CLN6-222ENST00000637667 BRD9Q9H8M2 597 aa21.71■■□□□ 1.07
CLN6-222ENST00000637667 TRPV4Q9HBA0 871 aa21.71■■□□□ 1.07
CLN6-222ENST00000637667 METTL23Q86XA0 190 aa21.7■■□□□ 1.06
CLN6-222ENST00000637667 NT5DC4Q86YG4 428 aa21.7■■□□□ 1.06
CLN6-222ENST00000637667 BRSK2Q8IWQ3 736 aa21.7■■□□□ 1.06
CLN6-222ENST00000637667 SYCP3Q8IZU3 236 aa21.7■■□□□ 1.06
CLN6-222ENST00000637667 PDILTQ8N807 584 aa21.7■■□□□ 1.06
CLN6-222ENST00000637667 LINC00301Q8NCQ3 95 aa21.7■■□□□ 1.06
CLN6-222ENST00000637667 PYM1Q9BRP8 204 aaKnown RBP21.7■■□□□ 1.06
CLN6-222ENST00000637667 FGFBP2Q9BYJ0 223 aa21.7■■□□□ 1.06
CLN6-222ENST00000637667 GPR88Q9GZN0 384 aa21.7■■□□□ 1.06
CLN6-222ENST00000637667 SLITRK6Q9H5Y7 841 aa21.7■■□□□ 1.06
CLN6-222ENST00000637667 HEBP1Q9NRV9 189 aa21.7■■□□□ 1.06
CLN6-222ENST00000637667 PANK4Q9NVE7 773 aa21.7■■□□□ 1.06
CLN6-222ENST00000637667 HSFX1Q9UBD0 423 aa21.7■■□□□ 1.06
CLN6-222ENST00000637667 ASB3Q9Y575 518 aa21.7■■□□□ 1.06
CLN6-222ENST00000637667 GPR179Q6PRD1 2367 aa21.7■■□□□ 1.06
CLN6-222ENST00000637667 COL4A3Q01955 1670 aa21.69■■□□□ 1.06
CLN6-222ENST00000637667 SCN1AP35498 2009 aa21.69■■□□□ 1.06
CLN6-222ENST00000637667 A0A1W2PRU2 124 aa21.69■■□□□ 1.06
CLN6-222ENST00000637667 SP9P0CG40 484 aa21.69■■□□□ 1.06
CLN6-222ENST00000637667 GARTP22102 1010 aa21.69■■□□□ 1.06
CLN6-222ENST00000637667 TARSP26639 723 aaKnown RBP21.69■■□□□ 1.06
CLN6-222ENST00000637667 VIPR2P41587 438 aa21.69■■□□□ 1.06
CLN6-222ENST00000637667 WSCD1Q658N2 575 aa21.69■■□□□ 1.06
CLN6-222ENST00000637667 VITQ6UXI7 678 aa21.69■■□□□ 1.06
CLN6-222ENST00000637667 ZNF852Q6ZMS4 543 aa21.69■■□□□ 1.06
CLN6-222ENST00000637667 ZSWIM2Q8NEG5 633 aa21.69■■□□□ 1.06
CLN6-222ENST00000637667 DEPDC1BQ8WUY9 529 aa21.69■■□□□ 1.06
CLN6-222ENST00000637667 SAAL1Q96ER3 474 aa21.69■■□□□ 1.06
CLN6-222ENST00000637667 NELL2Q99435 816 aa21.69■■□□□ 1.06
CLN6-222ENST00000637667 ZCWPW1Q9H0M4 648 aa21.69■■□□□ 1.06
CLN6-222ENST00000637667 SEMA4AQ9H3S1 761 aa21.69■■□□□ 1.06
CLN6-222ENST00000637667 WDR87Q6ZQQ6 2873 aa21.69■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms