RNA–Protein interactions for RNA: ENST00000637485.1

CACNA1A-242, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 5,481 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-242ENST00000637485 SUPT20HL1Q3ZLR7 823 aa10.15□□□□□ -0.79
CACNA1A-242ENST00000637485 UNC13DQ70J99 1090 aa10.15□□□□□ -0.79
CACNA1A-242ENST00000637485 ATG9AQ7Z3C6 839 aa10.15□□□□□ -0.79
CACNA1A-242ENST00000637485 NOP9Q86U38 636 aaKnown RBP10.15□□□□□ -0.79
CACNA1A-242ENST00000637485 DHX40Q8IX18 779 aaKnown RBP10.15□□□□□ -0.79
CACNA1A-242ENST00000637485 EFHD2Q96C19 240 aaPredicted RBP10.15□□□□□ -0.79
CACNA1A-242ENST00000637485 RMND5BQ96G75 393 aaPredicted RBP10.15□□□□□ -0.79
CACNA1A-242ENST00000637485 MAGEB5Q9BZ81 275 aa10.15□□□□□ -0.79
CACNA1A-242ENST00000637485 MANSC1Q9H8J5 431 aa10.15□□□□□ -0.79
CACNA1A-242ENST00000637485 ALG13Q9NP73 1137 aaKnown RBP10.15□□□□□ -0.79
CACNA1A-242ENST00000637485 COX16Q9P0S2 106 aa10.15□□□□□ -0.79
CACNA1A-242ENST00000637485 TMCO1Q9UM00 188 aa10.15□□□□□ -0.79
CACNA1A-242ENST00000637485 KIDINS220Q9ULH0 1771 aa10.15□□□□□ -0.79
CACNA1A-242ENST00000637485 LRRIQ4A6NIV6 560 aa10.14□□□□□ -0.79
CACNA1A-242ENST00000637485 MYO1GB0I1T2 1018 aa10.14□□□□□ -0.79
CACNA1A-242ENST00000637485 HNRNPDLO14979 420 aaKnown RBP10.14□□□□□ -0.79
CACNA1A-242ENST00000637485 PSMA3P25788 255 aa10.14□□□□□ -0.79
CACNA1A-242ENST00000637485 WDR93Q6P2C0 686 aa10.14□□□□□ -0.79
CACNA1A-242ENST00000637485 TRIM74Q86UV6 250 aa10.14□□□□□ -0.79
CACNA1A-242ENST00000637485 TRIM73Q86UV7 250 aa10.14□□□□□ -0.79
CACNA1A-242ENST00000637485 NUP93Q8N1F7 819 aa10.14□□□□□ -0.79
CACNA1A-242ENST00000637485 ISCUQ9H1K1 167 aa10.14□□□□□ -0.79
CACNA1A-242ENST00000637485 PIGUQ9H490 435 aa10.14□□□□□ -0.79
CACNA1A-242ENST00000637485 DCP1AQ9NPI6 582 aaPredicted RBP10.14□□□□□ -0.79
CACNA1A-242ENST00000637485 KMT5AQ9NQR1 393 aa10.14□□□□□ -0.79
CACNA1A-242ENST00000637485 TMEM161AQ9NX61 479 aa10.14□□□□□ -0.79
CACNA1A-242ENST00000637485 CNOT8Q9UFF9 292 aaKnown RBP10.14□□□□□ -0.79
CACNA1A-242ENST00000637485 KLHL3Q9UH77 587 aa10.14□□□□□ -0.79
CACNA1A-242ENST00000637485 DNAJC12Q9UKB3 198 aa10.14□□□□□ -0.79
CACNA1A-242ENST00000637485 CPS1P31327 1500 aa10.14□□□□□ -0.79
CACNA1A-242ENST00000637485 MROH7-TTC4A0A0A0MT08 1334 aa10.14□□□□□ -0.79
CACNA1A-242ENST00000637485 ALOX5P09917 674 aa10.14□□□□□ -0.79
CACNA1A-242ENST00000637485 FOSL2P15408 326 aa10.14□□□□□ -0.79
CACNA1A-242ENST00000637485 LRRC41Q15345 812 aa10.14□□□□□ -0.79
CACNA1A-242ENST00000637485 RASGRP2Q7LDG7 609 aa10.14□□□□□ -0.79
CACNA1A-242ENST00000637485 STX12Q86Y82 276 aa10.14□□□□□ -0.79
CACNA1A-242ENST00000637485 L2HGDHQ9H9P8 463 aa10.14□□□□□ -0.79
CACNA1A-242ENST00000637485 CCDC59Q9P031 241 aaKnown RBP10.14□□□□□ -0.79
CACNA1A-242ENST00000637485 H2AFY2Q9P0M6 372 aaPredicted RBP10.14□□□□□ -0.79
CACNA1A-242ENST00000637485 SEPT9Q9UHD8 586 aaPredicted RBP10.14□□□□□ -0.79
CACNA1A-242ENST00000637485 PCDHGB4Q9UN71 923 aa10.14□□□□□ -0.79
CACNA1A-242ENST00000637485 PCDHGA3Q9Y5H0 932 aa10.14□□□□□ -0.79
CACNA1A-242ENST00000637485 SMIM31A0A1B0GVY4 71 aa10.14□□□□□ -0.79
CACNA1A-242ENST00000637485 ZBTB5O15062 677 aa10.14□□□□□ -0.79
CACNA1A-242ENST00000637485 PHGDHO43175 533 aaKnown RBP10.14□□□□□ -0.79
CACNA1A-242ENST00000637485 JAK1P23458 1154 aa10.14□□□□□ -0.79
CACNA1A-242ENST00000637485 PSMA2P25787 234 aa10.14□□□□□ -0.79
CACNA1A-242ENST00000637485 POU5F1BQ06416 359 aa10.14□□□□□ -0.79
CACNA1A-242ENST00000637485 LBRQ14739 615 aaKnown RBP10.14□□□□□ -0.79
CACNA1A-242ENST00000637485 PDZK1Q5T2W1 519 aa10.14□□□□□ -0.79
CACNA1A-242ENST00000637485 SNX30Q5VWJ9 437 aa10.14□□□□□ -0.79
CACNA1A-242ENST00000637485 SEPT12Q8IYM1 358 aa10.14□□□□□ -0.79
CACNA1A-242ENST00000637485 ATL2Q8NHH9 583 aa10.14□□□□□ -0.79
CACNA1A-242ENST00000637485 SLC7A3Q8WY07 619 aa10.14□□□□□ -0.79
CACNA1A-242ENST00000637485 VPS50Q96JG6 964 aa10.14□□□□□ -0.79
CACNA1A-242ENST00000637485 TMEM47Q9BQJ4 181 aa10.14□□□□□ -0.79
CACNA1A-242ENST00000637485 SMARCAD1Q9H4L7 1026 aa10.14□□□□□ -0.79
CACNA1A-242ENST00000637485 RSL24D1Q9UHA3 163 aaKnown RBP10.14□□□□□ -0.79
CACNA1A-242ENST00000637485 HAO1Q9UJM8 370 aa10.14□□□□□ -0.79
CACNA1A-242ENST00000637485 UTYO14607 1347 aa10.14□□□□□ -0.79
CACNA1A-242ENST00000637485 PRLP01236 227 aa10.14□□□□□ -0.79
CACNA1A-242ENST00000637485 ATN1P54259 1190 aaPredicted RBP10.14□□□□□ -0.79
CACNA1A-242ENST00000637485 EXOSC10Q01780 885 aaKnown RBP10.14□□□□□ -0.79
CACNA1A-242ENST00000637485 SCRN3Q0VDG4 424 aa10.14□□□□□ -0.79
CACNA1A-242ENST00000637485 LONRF1Q17RB8 773 aa10.14□□□□□ -0.79
CACNA1A-242ENST00000637485 SPANXN2Q5MJ10 180 aa10.14□□□□□ -0.79
CACNA1A-242ENST00000637485 CRELD2Q6UXH1 353 aaPredicted RBP10.14□□□□□ -0.79
CACNA1A-242ENST00000637485 CLVS1Q8IUQ0 354 aaPredicted RBP10.14□□□□□ -0.79
CACNA1A-242ENST00000637485 FAM45AQ8TCE6 357 aa10.14□□□□□ -0.79
CACNA1A-242ENST00000637485 PLEKHA8Q96JA3 519 aa10.14□□□□□ -0.79
CACNA1A-242ENST00000637485 HEMGNQ9BXL5 484 aa10.14□□□□□ -0.79
CACNA1A-242ENST00000637485 CACNA2D2Q9NY47 1150 aa10.14□□□□□ -0.79
CACNA1A-242ENST00000637485 DBR1Q9UK59 544 aaKnown RBP10.14□□□□□ -0.79
CACNA1A-242ENST00000637485 TTC7AQ9ULT0 858 aaPredicted RBP10.14□□□□□ -0.79
CACNA1A-242ENST00000637485 GSG1L2A8MUP6 293 aa10.13□□□□□ -0.79
CACNA1A-242ENST00000637485 EVPLLA8MZ36 301 aa10.13□□□□□ -0.79
CACNA1A-242ENST00000637485 CDH3P22223 829 aa10.13□□□□□ -0.79
CACNA1A-242ENST00000637485 PIK3R1P27986 724 aa10.13□□□□□ -0.79
CACNA1A-242ENST00000637485 CCNA1P78396 465 aa10.13□□□□□ -0.79
CACNA1A-242ENST00000637485 COX10Q12887 443 aa10.13□□□□□ -0.79
CACNA1A-242ENST00000637485 STX5Q13190 355 aa10.13□□□□□ -0.79
CACNA1A-242ENST00000637485 MYBPC2Q14324 1141 aa10.13□□□□□ -0.79
CACNA1A-242ENST00000637485 KCTD2Q14681 263 aa10.13□□□□□ -0.79
CACNA1A-242ENST00000637485 NAALADL2Q58DX5 795 aa10.13□□□□□ -0.79
CACNA1A-242ENST00000637485 C1orf228Q6PIY5 440 aa10.13□□□□□ -0.79
CACNA1A-242ENST00000637485 FAM162AQ96A26 154 aa10.13□□□□□ -0.79
CACNA1A-242ENST00000637485 ANKRD36BP1Q96IX9 119 aa10.13□□□□□ -0.79
CACNA1A-242ENST00000637485 RXFP1Q9HBX9 757 aa10.13□□□□□ -0.79
CACNA1A-242ENST00000637485 DDX56Q9NY93 547 aaKnown RBP10.13□□□□□ -0.79
CACNA1A-242ENST00000637485 PVALEFA0A1B0GWK0 134 aa10.13□□□□□ -0.79
CACNA1A-242ENST00000637485 TK2O00142 265 aa10.13□□□□□ -0.79
CACNA1A-242ENST00000637485 PSMD14O00487 310 aa10.13□□□□□ -0.79
CACNA1A-242ENST00000637485 RAD51BO15315 384 aa10.13□□□□□ -0.79
CACNA1A-242ENST00000637485 NSUN2Q08J23 767 aaKnown RBP eCLIP10.13□□□□□ -0.79
CACNA1A-242ENST00000637485 ITGADQ13349 1161 aa10.13□□□□□ -0.79
CACNA1A-242ENST00000637485 UBE2SQ16763 222 aa10.13□□□□□ -0.79
CACNA1A-242ENST00000637485 FASTKD1Q53R41 847 aaKnown RBP10.13□□□□□ -0.79
CACNA1A-242ENST00000637485 THOC7Q6I9Y2 204 aaKnown RBP10.13□□□□□ -0.79
CACNA1A-242ENST00000637485 MAGEB18Q96M61 343 aa10.13□□□□□ -0.79
CACNA1A-242ENST00000637485 SERPINB12Q96P63 405 aa10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms