RNA–Protein interactions for RNA: ENST00000637450.1

CLN6-220, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 3

Gene CLN6, Length 868 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-220ENST00000637450 STYXL1Q9Y6J8 313 aa20.03■□□□□ 0.8
CLN6-220ENST00000637450 DCHS1Q96JQ0 3298 aa20.02■□□□□ 0.8
CLN6-220ENST00000637450 ANO9A1A5B4 782 aa20.02■□□□□ 0.8
CLN6-220ENST00000637450 NFICP08651 508 aa20.02■□□□□ 0.8
CLN6-220ENST00000637450 PSMC3P17980 439 aa20.02■□□□□ 0.8
CLN6-220ENST00000637450 VIPR2P41587 438 aa20.02■□□□□ 0.8
CLN6-220ENST00000637450 ACOT2P49753 483 aa20.02■□□□□ 0.8
CLN6-220ENST00000637450 PTPAQ15257 358 aa20.02■□□□□ 0.8
CLN6-220ENST00000637450 TEAD2Q15562 447 aa20.02■□□□□ 0.8
CLN6-220ENST00000637450 ADALQ6DHV7 355 aa20.02■□□□□ 0.8
CLN6-220ENST00000637450 SLFN12LQ6IEE8 588 aa20.02■□□□□ 0.8
CLN6-220ENST00000637450 VITQ6UXI7 678 aa20.02■□□□□ 0.8
CLN6-220ENST00000637450 USP49Q70CQ1 688 aa20.02■□□□□ 0.8
CLN6-220ENST00000637450 ZNF720Q7Z2F6 126 aa20.02■□□□□ 0.8
CLN6-220ENST00000637450 KRI1Q8N9T8 703 aaKnown RBP20.02■□□□□ 0.8
CLN6-220ENST00000637450 SHKBP1Q8TBC3 707 aa20.02■□□□□ 0.8
CLN6-220ENST00000637450 ZSCAN18Q8TBC5 510 aaPredicted RBP20.02■□□□□ 0.8
CLN6-220ENST00000637450 BORCS6Q96GS4 357 aa20.02■□□□□ 0.8
CLN6-220ENST00000637450 DNAJC25Q9H1X3 360 aa20.02■□□□□ 0.8
CLN6-220ENST00000637450 ASB7Q9H672 318 aa20.02■□□□□ 0.8
CLN6-220ENST00000637450 ZNF334Q9HCZ1 680 aaPredicted RBP20.02■□□□□ 0.8
CLN6-220ENST00000637450 SLC27A5Q9Y2P5 690 aa20.02■□□□□ 0.8
CLN6-220ENST00000637450 CLIC4Q9Y696 253 aa20.02■□□□□ 0.8
CLN6-220ENST00000637450 MTMR11A4FU01 709 aa20.01■□□□□ 0.79
CLN6-220ENST00000637450 VPS37CA5D8V6 355 aaPredicted RBP20.01■□□□□ 0.79
CLN6-220ENST00000637450 TISP43B9A030 160 aa20.01■□□□□ 0.79
CLN6-220ENST00000637450 MAN2B1O00754 1011 aa20.01■□□□□ 0.79
CLN6-220ENST00000637450 ODC1P11926 461 aa20.01■□□□□ 0.79
CLN6-220ENST00000637450 ALDH1A3P47895 512 aa20.01■□□□□ 0.79
CLN6-220ENST00000637450 EPHB3P54753 998 aa20.01■□□□□ 0.79
CLN6-220ENST00000637450 POU5F1Q01860 360 aaKnown RBP20.01■□□□□ 0.79
CLN6-220ENST00000637450 CSTF1Q05048 431 aaKnown RBP20.01■□□□□ 0.79
CLN6-220ENST00000637450 TMEM132DQ14C87 1099 aa20.01■□□□□ 0.79
CLN6-220ENST00000637450 ARMCX5Q6P1M9 558 aa20.01■□□□□ 0.79
CLN6-220ENST00000637450 TMC8Q8IU68 726 aa20.01■□□□□ 0.79
CLN6-220ENST00000637450 MFSD6LQ8IWD5 586 aa20.01■□□□□ 0.79
CLN6-220ENST00000637450 ZNF687Q8N1G0 1237 aa20.01■□□□□ 0.79
CLN6-220ENST00000637450 ATAD1Q8NBU5 361 aa20.01■□□□□ 0.79
CLN6-220ENST00000637450 DEPDC1BQ8WUY9 529 aa20.01■□□□□ 0.79
CLN6-220ENST00000637450 TMEM209Q96SK2 561 aa20.01■□□□□ 0.79
CLN6-220ENST00000637450 AGO2Q9UKV8 859 aaKnown RBP20.01■□□□□ 0.79
CLN6-220ENST00000637450 C2CD2Q9Y426 696 aa20.01■□□□□ 0.79
CLN6-220ENST00000637450 PDCD11Q14690 1871 aaKnown RBP20.01■□□□□ 0.79
CLN6-220ENST00000637450 F5P12259 2224 aa20■□□□□ 0.79
CLN6-220ENST00000637450 CYP11A1P05108 521 aa20■□□□□ 0.79
CLN6-220ENST00000637450 PDCP20941 246 aa20■□□□□ 0.79
CLN6-220ENST00000637450 GDI1P31150 447 aa20■□□□□ 0.79
CLN6-220ENST00000637450 FOXK2Q01167 660 aa20■□□□□ 0.79
CLN6-220ENST00000637450 DYMQ7RTS9 669 aa20■□□□□ 0.79
CLN6-220ENST00000637450 SUMF1Q8NBK3 374 aa20■□□□□ 0.79
CLN6-220ENST00000637450 E2F7Q96AV8 911 aa20■□□□□ 0.79
CLN6-220ENST00000637450 STRA6Q9BX79 667 aa20■□□□□ 0.79
CLN6-220ENST00000637450 HSFX1Q9UBD0 423 aa20■□□□□ 0.79
CLN6-220ENST00000637450 FBXO2Q9UK22 296 aaPredicted RBP20■□□□□ 0.79
CLN6-220ENST00000637450 ASB3Q9Y575 518 aa20■□□□□ 0.79
CLN6-220ENST00000637450 SRPRBQ9Y5M8 271 aaKnown RBP20■□□□□ 0.79
CLN6-220ENST00000637450 GPR179Q6PRD1 2367 aa19.99■□□□□ 0.79
CLN6-220ENST00000637450 A0A1W2PRU2 124 aa19.99■□□□□ 0.79
CLN6-220ENST00000637450 KINO60870 393 aaKnown RBP19.99■□□□□ 0.79
CLN6-220ENST00000637450 ID4P47928 161 aa19.99■□□□□ 0.79
CLN6-220ENST00000637450 CRELD2Q6UXH1 353 aaPredicted RBP19.99■□□□□ 0.79
CLN6-220ENST00000637450 DNAJB7Q7Z6W7 309 aaPredicted RBP19.99■□□□□ 0.79
CLN6-220ENST00000637450 SFR1Q86XK3 245 aa19.99■□□□□ 0.79
CLN6-220ENST00000637450 SLITRK6Q9H5Y7 841 aa19.99■□□□□ 0.79
CLN6-220ENST00000637450 STK17AQ9UEE5 414 aa19.99■□□□□ 0.79
CLN6-220ENST00000637450 CCDC39Q9UFE4 941 aa19.99■□□□□ 0.79
CLN6-220ENST00000637450 OTOGLQ3ZCN5 2332 aa19.99■□□□□ 0.79
CLN6-220ENST00000637450 NCANO14594 1321 aa19.99■□□□□ 0.79
CLN6-220ENST00000637450 HEPACAM2A8MVW5 462 aa19.98■□□□□ 0.79
CLN6-220ENST00000637450 ZNF263O14978 683 aa19.98■□□□□ 0.79
CLN6-220ENST00000637450 PPP1R37O75864 691 aa19.98■□□□□ 0.79
CLN6-220ENST00000637450 ADSSP30520 456 aa19.98■□□□□ 0.79
CLN6-220ENST00000637450 POSTNQ15063 836 aa19.98■□□□□ 0.79
CLN6-220ENST00000637450 TTC9BQ8N6N2 239 aa19.98■□□□□ 0.79
CLN6-220ENST00000637450 OR10T2Q8NGX3 314 aa19.98■□□□□ 0.79
CLN6-220ENST00000637450 RUBCNQ92622 972 aa19.98■□□□□ 0.79
CLN6-220ENST00000637450 NELL1Q92832 810 aa19.98■□□□□ 0.79
CLN6-220ENST00000637450 PSMG2Q969U7 264 aa19.98■□□□□ 0.79
CLN6-220ENST00000637450 HVCN1Q96D96 273 aa19.98■□□□□ 0.79
CLN6-220ENST00000637450 RSPRY1Q96DX4 576 aa19.98■□□□□ 0.79
CLN6-220ENST00000637450 CLIC6Q96NY7 704 aa19.98■□□□□ 0.79
CLN6-220ENST00000637450 IKZF4Q9H2S9 585 aa19.98■□□□□ 0.79
CLN6-220ENST00000637450 DPP3Q9NY33 737 aa19.98■□□□□ 0.79
CLN6-220ENST00000637450 SEL1LQ9UBV2 794 aa19.98■□□□□ 0.79
CLN6-220ENST00000637450 DSEQ9UL01 958 aa19.98■□□□□ 0.79
CLN6-220ENST00000637450 PCDHGA2Q9Y5H1 932 aa19.98■□□□□ 0.79
CLN6-220ENST00000637450 MYMKA6NI61 221 aa19.97■□□□□ 0.79
CLN6-220ENST00000637450 ARNTLO00327 626 aa19.97■□□□□ 0.79
CLN6-220ENST00000637450 CYB561D2O14569 222 aa19.97■□□□□ 0.79
CLN6-220ENST00000637450 SOAT2O75908 522 aa19.97■□□□□ 0.79
CLN6-220ENST00000637450 MTAPQ13126 283 aa19.97■□□□□ 0.79
CLN6-220ENST00000637450 RESTQ13127 1097 aa19.97■□□□□ 0.79
CLN6-220ENST00000637450 SLC39A12Q504Y0 691 aa19.97■□□□□ 0.79
CLN6-220ENST00000637450 RRAGBQ5VZM2 374 aa19.97■□□□□ 0.79
CLN6-220ENST00000637450 MAMSTRQ6ZN01 415 aa19.97■□□□□ 0.79
CLN6-220ENST00000637450 GAREM2Q75VX8 874 aa19.97■□□□□ 0.79
CLN6-220ENST00000637450 SV2BQ7L1I2 683 aa19.97■□□□□ 0.79
CLN6-220ENST00000637450 ZBTB44Q8NCP5 570 aa19.97■□□□□ 0.79
CLN6-220ENST00000637450 ATRIPQ8WXE1 791 aa19.97■□□□□ 0.79
CLN6-220ENST00000637450 POMGNT1Q8WZA1 660 aa19.97■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms