RNA–Protein interactions for RNA: ENST00000637325.1

PNKP-228, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 100 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-228ENST00000637325 MFSD1Q9H3U5 465 aa14.91□□□□□ -0.02
PNKP-228ENST00000637325 SLC39A2Q9NP94 309 aa14.91□□□□□ -0.02
PNKP-228ENST00000637325 FBXL21Q9UKT6 434 aa14.91□□□□□ -0.02
PNKP-228ENST00000637325 CDH7Q9ULB5 785 aa14.91□□□□□ -0.02
PNKP-228ENST00000637325 RHOP08100 348 aa14.9□□□□□ -0.02
PNKP-228ENST00000637325 KRT19P08727 400 aa14.9□□□□□ -0.02
PNKP-228ENST00000637325 OR4Q2P0C623 313 aa14.9□□□□□ -0.02
PNKP-228ENST00000637325 TMEM191BP0C7N4 346 aa14.9□□□□□ -0.02
PNKP-228ENST00000637325 POLR2BP30876 1174 aaKnown RBP14.9□□□□□ -0.02
PNKP-228ENST00000637325 PNPLA4P41247 253 aa14.9□□□□□ -0.02
PNKP-228ENST00000637325 TWF1Q12792 350 aa14.9□□□□□ -0.02
PNKP-228ENST00000637325 MYBPC2Q14324 1141 aa14.9□□□□□ -0.02
PNKP-228ENST00000637325 SURF1Q15526 300 aa14.9□□□□□ -0.02
PNKP-228ENST00000637325 IQCEQ6IPM2 695 aa14.9□□□□□ -0.02
PNKP-228ENST00000637325 EPM2AIP1Q7L775 607 aaPredicted RBP14.9□□□□□ -0.02
PNKP-228ENST00000637325 HS2ST1Q7LGA3 356 aa14.9□□□□□ -0.02
PNKP-228ENST00000637325 CSGALNACT2Q8N6G5 542 aa14.9□□□□□ -0.02
PNKP-228ENST00000637325 FGF13Q92913 245 aa14.9□□□□□ -0.02
PNKP-228ENST00000637325 PAGE5Q96GU1 130 aa14.9□□□□□ -0.02
PNKP-228ENST00000637325 ANKRD36BP1Q96IX9 119 aa14.9□□□□□ -0.02
PNKP-228ENST00000637325 ZNF512Q96ME7 567 aaPredicted RBP14.9□□□□□ -0.02
PNKP-228ENST00000637325 CORO1BQ9BR76 489 aa14.9□□□□□ -0.02
PNKP-228ENST00000637325 KIAA1586Q9HCI6 787 aa14.9□□□□□ -0.02
PNKP-228ENST00000637325 PDE11AQ9HCR9 933 aa14.9□□□□□ -0.02
PNKP-228ENST00000637325 EXOC1Q9NV70 894 aa14.9□□□□□ -0.02
PNKP-228ENST00000637325 HSPBP1Q9NZL4 362 aa14.9□□□□□ -0.02
PNKP-228ENST00000637325 DUSP12Q9UNI6 340 aa14.9□□□□□ -0.02
PNKP-228ENST00000637325 AGAP1Q9UPQ3 857 aa14.9□□□□□ -0.02
PNKP-228ENST00000637325 ARIH1Q9Y4X5 557 aaPredicted RBP14.9□□□□□ -0.02
PNKP-228ENST00000637325 KPNA7A9QM74 516 aa14.89□□□□□ -0.03
PNKP-228ENST00000637325 ZNF197O14709 1029 aa14.89□□□□□ -0.03
PNKP-228ENST00000637325 CLIC2O15247 247 aa14.89□□□□□ -0.03
PNKP-228ENST00000637325 ACTN4O43707 911 aaKnown RBP14.89□□□□□ -0.03
PNKP-228ENST00000637325 TNNC2P02585 160 aa14.89□□□□□ -0.03
PNKP-228ENST00000637325 ITGB3P05106 788 aa14.89□□□□□ -0.03
PNKP-228ENST00000637325 CYP11A1P05108 521 aa14.89□□□□□ -0.03
PNKP-228ENST00000637325 HOXD13P35453 343 aa14.89□□□□□ -0.03
PNKP-228ENST00000637325 SYKP43405 635 aa14.89□□□□□ -0.03
PNKP-228ENST00000637325 CYP2J2P51589 502 aa14.89□□□□□ -0.03
PNKP-228ENST00000637325 WNT7BP56706 349 aa14.89□□□□□ -0.03
PNKP-228ENST00000637325 SNRPFP62306 86 aaKnown RBP14.89□□□□□ -0.03
PNKP-228ENST00000637325 RBP5P82980 135 aa14.89□□□□□ -0.03
PNKP-228ENST00000637325 GPR17Q13304 367 aa14.89□□□□□ -0.03
PNKP-228ENST00000637325 PLD1Q13393 1074 aa14.89□□□□□ -0.03
PNKP-228ENST00000637325 CYP4A22Q5TCH4 519 aa14.89□□□□□ -0.03
PNKP-228ENST00000637325 MTSS1LQ765P7 747 aa14.89□□□□□ -0.03
PNKP-228ENST00000637325 SLC44A3Q8N4M1 653 aa14.89□□□□□ -0.03
PNKP-228ENST00000637325 RDH13Q8NBN7 331 aa14.89□□□□□ -0.03
PNKP-228ENST00000637325 ST13P5Q8NFI4 369 aaPredicted RBP14.89□□□□□ -0.03
PNKP-228ENST00000637325 SCFD1Q8WVM8 642 aa14.89□□□□□ -0.03
PNKP-228ENST00000637325 ING5Q8WYH8 240 aa14.89□□□□□ -0.03
PNKP-228ENST00000637325 ITGA11Q9UKX5 1188 aa14.89□□□□□ -0.03
PNKP-228ENST00000637325 ANHXE9PGG2 379 aa14.88□□□□□ -0.03
PNKP-228ENST00000637325 NARSO43776 548 aaKnown RBP14.88□□□□□ -0.03
PNKP-228ENST00000637325 PDGFBP01127 241 aaPredicted RBP14.88□□□□□ -0.03
PNKP-228ENST00000637325 ALDH1A3P47895 512 aa14.88□□□□□ -0.03
PNKP-228ENST00000637325 EHHADHQ08426 723 aa14.88□□□□□ -0.03
PNKP-228ENST00000637325 BFSP1Q12934 665 aa14.88□□□□□ -0.03
PNKP-228ENST00000637325 DUSP4Q13115 394 aa14.88□□□□□ -0.03
PNKP-228ENST00000637325 HTR4Q13639 388 aa14.88□□□□□ -0.03
PNKP-228ENST00000637325 WSCD1Q658N2 575 aa14.88□□□□□ -0.03
PNKP-228ENST00000637325 PDZD4Q76G19 769 aaPredicted RBP14.88□□□□□ -0.03
PNKP-228ENST00000637325 CBWD2Q8IUF1 395 aa14.88□□□□□ -0.03
PNKP-228ENST00000637325 C1orf127Q8N9H9 656 aa14.88□□□□□ -0.03
PNKP-228ENST00000637325 FSIP1Q8NA03 581 aa14.88□□□□□ -0.03
PNKP-228ENST00000637325 CCDC47Q96A33 483 aaKnown RBP14.88□□□□□ -0.03
PNKP-228ENST00000637325 MCRS1Q96EZ8 462 aa14.88□□□□□ -0.03
PNKP-228ENST00000637325 MTMR12Q9C0I1 747 aa14.88□□□□□ -0.03
PNKP-228ENST00000637325 KCNH6Q9H252 994 aa14.88□□□□□ -0.03
PNKP-228ENST00000637325 AGPAT3Q9NRZ7 376 aa14.88□□□□□ -0.03
PNKP-228ENST00000637325 CGNQ9P2M7 1197 aaKnown RBP14.88□□□□□ -0.03
PNKP-228ENST00000637325 HPSEQ9Y251 543 aa14.88□□□□□ -0.03
PNKP-228ENST00000637325 NUMBLQ9Y6R0 609 aa14.88□□□□□ -0.03
PNKP-228ENST00000637325 STK25O00506 426 aa14.87□□□□□ -0.03
PNKP-228ENST00000637325 TGFB1I1O43294 461 aa14.87□□□□□ -0.03
PNKP-228ENST00000637325 HUS1O60921 280 aa14.87□□□□□ -0.03
PNKP-228ENST00000637325 MYL1P05976 194 aa14.87□□□□□ -0.03
PNKP-228ENST00000637325 CFHP08603 1231 aa14.87□□□□□ -0.03
PNKP-228ENST00000637325 SRFP11831 508 aa14.87□□□□□ -0.03
PNKP-228ENST00000637325 RFX1P22670 979 aa14.87□□□□□ -0.03
PNKP-228ENST00000637325 NDUFA8P51970 172 aa14.87□□□□□ -0.03
PNKP-228ENST00000637325 EPHB3P54753 998 aa14.87□□□□□ -0.03
PNKP-228ENST00000637325 NUCB2P80303 420 aa14.87□□□□□ -0.03
PNKP-228ENST00000637325 PSMD2Q13200 908 aa14.87□□□□□ -0.03
PNKP-228ENST00000637325 SNRNP35Q16560 246 aaKnown RBP14.87□□□□□ -0.03
PNKP-228ENST00000637325 KNOP1Q1ED39 458 aaKnown RBP14.87□□□□□ -0.03
PNKP-228ENST00000637325 DUOXA2Q1HG44 320 aa14.87□□□□□ -0.03
PNKP-228ENST00000637325 KMT5BQ4FZB7 885 aa14.87□□□□□ -0.03
PNKP-228ENST00000637325 SLC39A12Q504Y0 691 aa14.87□□□□□ -0.03
PNKP-228ENST00000637325 LMBRD2Q68DH5 695 aaPredicted RBP14.87□□□□□ -0.03
PNKP-228ENST00000637325 CENPPQ6IPU0 288 aa14.87□□□□□ -0.03
PNKP-228ENST00000637325 PARM1Q6UWI2 310 aa14.87□□□□□ -0.03
PNKP-228ENST00000637325 NPAS3Q8IXF0 933 aa14.87□□□□□ -0.03
PNKP-228ENST00000637325 LRRC52Q8N7C0 313 aa14.87□□□□□ -0.03
PNKP-228ENST00000637325 XXYLT1Q8NBI6 393 aa14.87□□□□□ -0.03
PNKP-228ENST00000637325 FLCNQ8NFG4 579 aa14.87□□□□□ -0.03
PNKP-228ENST00000637325 FNBP1Q96RU3 617 aa14.87□□□□□ -0.03
PNKP-228ENST00000637325 TMEM209Q96SK2 561 aa14.87□□□□□ -0.03
PNKP-228ENST00000637325 AVENQ9NQS1 362 aaPredicted RBP14.87□□□□□ -0.03
PNKP-228ENST00000637325 ASAH2Q9NR71 780 aa14.87□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms