RNA–Protein interactions for RNA: ENST00000636840.1

PNKP-226, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 117 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-226ENST00000636840 TNNC1P63316 161 aa8.84□□□□□ -0.99
PNKP-226ENST00000636840 MYL7Q01449 175 aa8.84□□□□□ -0.99
PNKP-226ENST00000636840 TSPY1Q01534 308 aa8.84□□□□□ -0.99
PNKP-226ENST00000636840 TFF2Q03403 129 aa8.84□□□□□ -0.99
PNKP-226ENST00000636840 CETN1Q12798 172 aa8.84□□□□□ -0.99
PNKP-226ENST00000636840 SMAD4Q13485 552 aaKnown RBP8.84□□□□□ -0.99
PNKP-226ENST00000636840 CLUL1Q15846 466 aa8.84□□□□□ -0.99
PNKP-226ENST00000636840 CCDC40Q4G0X9 1142 aa8.84□□□□□ -0.99
PNKP-226ENST00000636840 PPM1LQ5SGD2 360 aa8.84□□□□□ -0.99
PNKP-226ENST00000636840 TCERG1LQ5VWI1 586 aa8.84□□□□□ -0.99
PNKP-226ENST00000636840 LILRA6Q6PI73 481 aa8.84□□□□□ -0.99
PNKP-226ENST00000636840 SASS6Q6UVJ0 657 aa8.84□□□□□ -0.99
PNKP-226ENST00000636840 FRMD5Q7Z6J6 570 aa8.84□□□□□ -0.99
PNKP-226ENST00000636840 DCP1BQ8IZD4 617 aaKnown RBP8.84□□□□□ -0.99
PNKP-226ENST00000636840 OR5B17Q8NGF7 314 aa8.84□□□□□ -0.99
PNKP-226ENST00000636840 SPATA18Q8TC71 538 aa8.84□□□□□ -0.99
PNKP-226ENST00000636840 TAF4BQ92750 862 aa8.84□□□□□ -0.99
PNKP-226ENST00000636840 NECTIN4Q96NY8 510 aa8.84□□□□□ -0.99
PNKP-226ENST00000636840 POP1Q99575 1024 aaKnown RBP8.84□□□□□ -0.99
PNKP-226ENST00000636840 ADAM7Q9H2U9 754 aa8.84□□□□□ -0.99
PNKP-226ENST00000636840 SFXN1Q9H9B4 322 aa8.84□□□□□ -0.99
PNKP-226ENST00000636840 MAN1C1Q9NR34 630 aa8.84□□□□□ -0.99
PNKP-226ENST00000636840 GDAP2Q9NXN4 497 aa8.84□□□□□ -0.99
PNKP-226ENST00000636840 ARMCX3Q9UH62 379 aaPredicted RBP8.84□□□□□ -0.99
PNKP-226ENST00000636840 FBXL5Q9UKA1 691 aa8.84□□□□□ -0.99
PNKP-226ENST00000636840 BARX2Q9UMQ3 279 aaPredicted RBP8.84□□□□□ -0.99
PNKP-226ENST00000636840 TIMM13Q9Y5L4 95 aaPredicted RBP8.84□□□□□ -0.99
PNKP-226ENST00000636840 SNX9Q9Y5X1 595 aa8.84□□□□□ -0.99
PNKP-226ENST00000636840 CDY1Q9Y6F8 540 aa8.84□□□□□ -0.99
PNKP-226ENST00000636840 CCDC195A0A1B0GUA6 201 aa8.83□□□□□ -1
PNKP-226ENST00000636840 LRRIQ3A6PVS8 624 aaPredicted RBP8.83□□□□□ -1
PNKP-226ENST00000636840 PRRG1O14668 218 aa8.83□□□□□ -1
PNKP-226ENST00000636840 PPEF2O14830 753 aa8.83□□□□□ -1
PNKP-226ENST00000636840 MBTPS2O43462 519 aa8.83□□□□□ -1
PNKP-226ENST00000636840 ZMYND10O75800 440 aa8.83□□□□□ -1
PNKP-226ENST00000636840 AKAP3O75969 853 aa8.83□□□□□ -1
PNKP-226ENST00000636840 LETM1O95202 739 aaPredicted RBP8.83□□□□□ -1
PNKP-226ENST00000636840 STAU1O95793 577 aaKnown RBP8.83□□□□□ -1
PNKP-226ENST00000636840 LRG1P02750 347 aa8.83□□□□□ -1
PNKP-226ENST00000636840 C4BPAP04003 597 aaKnown RBP8.83□□□□□ -1
PNKP-226ENST00000636840 HNRNPA1P09651 372 aaKnown RBP eCLIP8.83□□□□□ -1
PNKP-226ENST00000636840 SPATA31D3P0C874 917 aa8.83□□□□□ -1
PNKP-226ENST00000636840 CCDC192P0DO97 292 aa8.83□□□□□ -1
PNKP-226ENST00000636840 ATF2P15336 505 aa8.83□□□□□ -1
PNKP-226ENST00000636840 PCSK1P29120 753 aa8.83□□□□□ -1
PNKP-226ENST00000636840 NLRP12P59046 1061 aa8.83□□□□□ -1
PNKP-226ENST00000636840 CLDN10P78369 228 aa8.83□□□□□ -1
PNKP-226ENST00000636840 DLX2Q07687 328 aaPredicted RBP8.83□□□□□ -1
PNKP-226ENST00000636840 NCOA4Q13772 614 aa8.83□□□□□ -1
PNKP-226ENST00000636840 KCNC3Q14003 757 aa8.83□□□□□ -1
PNKP-226ENST00000636840 WDR72Q3MJ13 1102 aa8.83□□□□□ -1
PNKP-226ENST00000636840 ZCWPW2Q504Y3 356 aa8.83□□□□□ -1
PNKP-226ENST00000636840 ZNF667Q5HYK9 610 aa8.83□□□□□ -1
PNKP-226ENST00000636840 WDR44Q5JSH3 913 aa8.83□□□□□ -1
PNKP-226ENST00000636840 RARS2Q5T160 578 aaKnown RBP8.83□□□□□ -1
PNKP-226ENST00000636840 KRT39Q6A163 491 aa8.83□□□□□ -1
PNKP-226ENST00000636840 SLC8B1Q6J4K2 584 aa8.83□□□□□ -1
PNKP-226ENST00000636840 C15orf39Q6ZRI6 1047 aa8.83□□□□□ -1
PNKP-226ENST00000636840 SPATA31D4Q6ZUB0 917 aa8.83□□□□□ -1
PNKP-226ENST00000636840 SV2AQ7L0J3 742 aa8.83□□□□□ -1
PNKP-226ENST00000636840 CREBRFQ8IUR6 639 aa8.83□□□□□ -1
PNKP-226ENST00000636840 ELMOD1Q8N336 334 aa8.83□□□□□ -1
PNKP-226ENST00000636840 TOP6BLQ8N6T0 577 aa8.83□□□□□ -1
PNKP-226ENST00000636840 SMRP1Q8NCR6 262 aa8.83□□□□□ -1
PNKP-226ENST00000636840 VN1R2Q8NFZ6 395 aa8.83□□□□□ -1
PNKP-226ENST00000636840 GADD45GIP1Q8TAE8 222 aaPredicted RBP8.83□□□□□ -1
PNKP-226ENST00000636840 MSLNLQ96KJ4 702 aa8.83□□□□□ -1
PNKP-226ENST00000636840 SRRTQ9BXP5 876 aaKnown RBP8.83□□□□□ -1
PNKP-226ENST00000636840 SNX25Q9H3E2 840 aa8.83□□□□□ -1
PNKP-226ENST00000636840 ZDHHC7Q9NXF8 308 aa8.83□□□□□ -1
PNKP-226ENST00000636840 CLEC1BQ9P126 229 aa8.83□□□□□ -1
PNKP-226ENST00000636840 PRKAG3Q9UGI9 489 aa8.83□□□□□ -1
PNKP-226ENST00000636840 AFF4Q9UHB7 1163 aaKnown RBP8.83□□□□□ -1
PNKP-226ENST00000636840 RWDD2AQ9UIY3 292 aa8.83□□□□□ -1
PNKP-226ENST00000636840 CTNND2Q9UQB3 1225 aa8.83□□□□□ -1
PNKP-226ENST00000636840 COL4A4P53420 1690 aaPredicted RBP8.83□□□□□ -1
PNKP-226ENST00000636840 SPTLC1O15269 473 aa8.82□□□□□ -1
PNKP-226ENST00000636840 TBC1D4O60343 1298 aa8.82□□□□□ -1
PNKP-226ENST00000636840 TBX10O75333 385 aa8.82□□□□□ -1
PNKP-226ENST00000636840 ABLIM3O94929 683 aa8.82□□□□□ -1
PNKP-226ENST00000636840 GLP2RO95838 553 aa8.82□□□□□ -1
PNKP-226ENST00000636840 BMP1P13497 986 aa8.82□□□□□ -1
PNKP-226ENST00000636840 PRKCSHP14314 528 aaPredicted RBP8.82□□□□□ -1
PNKP-226ENST00000636840 CD44P16070 742 aaKnown RBP8.82□□□□□ -1
PNKP-226ENST00000636840 IGFBP6P24592 240 aaPredicted RBP8.82□□□□□ -1
PNKP-226ENST00000636840 ERCC5P28715 1186 aaPredicted RBP8.82□□□□□ -1
PNKP-226ENST00000636840 HOXA9P31269 272 aa8.82□□□□□ -1
PNKP-226ENST00000636840 GNL1P36915 607 aaPredicted RBP8.82□□□□□ -1
PNKP-226ENST00000636840 ALDH1A3P47895 512 aa8.82□□□□□ -1
PNKP-226ENST00000636840 TUFMP49411 452 aaKnown RBP8.82□□□□□ -1
PNKP-226ENST00000636840 WNT7BP56706 349 aa8.82□□□□□ -1
PNKP-226ENST00000636840 STX17P56962 302 aa8.82□□□□□ -1
PNKP-226ENST00000636840 ROR1Q01973 937 aa8.82□□□□□ -1
PNKP-226ENST00000636840 GPR17Q13304 367 aa8.82□□□□□ -1
PNKP-226ENST00000636840 MAPRE1Q15691 268 aaKnown RBP8.82□□□□□ -1
PNKP-226ENST00000636840 NFE2Q16621 373 aaPredicted RBP8.82□□□□□ -1
PNKP-226ENST00000636840 SKOR2Q2VWA4 1001 aaPredicted RBP8.82□□□□□ -1
PNKP-226ENST00000636840 ZNF699Q32M78 642 aa8.82□□□□□ -1
PNKP-226ENST00000636840 ZACNQ401N2 412 aa8.82□□□□□ -1
PNKP-226ENST00000636840 CCDC183Q5T5S1 534 aa8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms