RNA–Protein interactions for RNA: ENST00000636674.1

CLN6-215, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 2,005 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-215ENST00000636674 YARSP54577 528 aaKnown RBP15.4■□□□□ 0.06
CLN6-215ENST00000636674 CUL2Q13617 745 aa15.4■□□□□ 0.06
CLN6-215ENST00000636674 P3H1Q32P28 736 aa15.4■□□□□ 0.06
CLN6-215ENST00000636674 TDRD10Q5VZ19 366 aaKnown RBP15.4■□□□□ 0.06
CLN6-215ENST00000636674 MIS18BP1Q6P0N0 1132 aa15.4■□□□□ 0.06
CLN6-215ENST00000636674 C11orf70Q9BRQ4 267 aa15.4■□□□□ 0.06
CLN6-215ENST00000636674 PITPNM3Q9BZ71 974 aa15.4■□□□□ 0.06
CLN6-215ENST00000636674 KIAA1683Q9H0B3 1180 aa15.4■□□□□ 0.06
CLN6-215ENST00000636674 RAVER2Q9HCJ3 691 aaKnown RBP15.4■□□□□ 0.06
CLN6-215ENST00000636674 XPNPEP1Q9NQW7 623 aa15.4■□□□□ 0.06
CLN6-215ENST00000636674 KCNG1Q9UIX4 513 aa15.4■□□□□ 0.06
CLN6-215ENST00000636674 SMG5Q9UPR3 1016 aaKnown RBP15.4■□□□□ 0.06
CLN6-215ENST00000636674 EXOC1LA0A1B0GW35 172 aa15.39■□□□□ 0.05
CLN6-215ENST00000636674 ANP32DO95626 131 aa15.39■□□□□ 0.05
CLN6-215ENST00000636674 MYCLP12524 364 aaPredicted RBP15.39■□□□□ 0.05
CLN6-215ENST00000636674 PIK3CAP42336 1068 aa15.39■□□□□ 0.05
CLN6-215ENST00000636674 POLGP54098 1239 aaPredicted RBP15.39■□□□□ 0.05
CLN6-215ENST00000636674 LACTBP83111 547 aaPredicted RBP15.39■□□□□ 0.05
CLN6-215ENST00000636674 MYO1EQ12965 1108 aa15.39■□□□□ 0.05
CLN6-215ENST00000636674 NFX1Q12986 1120 aaKnown RBP15.39■□□□□ 0.05
CLN6-215ENST00000636674 TMED2Q15363 201 aa15.39■□□□□ 0.05
CLN6-215ENST00000636674 PARP6Q2NL67 630 aa15.39■□□□□ 0.05
CLN6-215ENST00000636674 EAPPQ56P03 285 aaPredicted RBP15.39■□□□□ 0.05
CLN6-215ENST00000636674 SPDYAQ5MJ70 313 aa15.39■□□□□ 0.05
CLN6-215ENST00000636674 LRRC38Q5VT99 294 aa15.39■□□□□ 0.05
CLN6-215ENST00000636674 RCOR2Q8IZ40 523 aa15.39■□□□□ 0.05
CLN6-215ENST00000636674 CPXCR1Q8N123 301 aa15.39■□□□□ 0.05
CLN6-215ENST00000636674 NSMCE1Q8WV22 266 aa15.39■□□□□ 0.05
CLN6-215ENST00000636674 MIEF2Q96C03 454 aa15.39■□□□□ 0.05
CLN6-215ENST00000636674 PHACTR1Q9C0D0 580 aa15.39■□□□□ 0.05
CLN6-215ENST00000636674 IP6K2Q9UHH9 426 aa15.39■□□□□ 0.05
CLN6-215ENST00000636674 GSTTP1A0A1W2PQM5 241 aa15.39■□□□□ 0.05
CLN6-215ENST00000636674 TLR3O15455 904 aaKnown RBP15.39■□□□□ 0.05
CLN6-215ENST00000636674 VNN1O95497 513 aa15.39■□□□□ 0.05
CLN6-215ENST00000636674 PIGRP01833 764 aa15.39■□□□□ 0.05
CLN6-215ENST00000636674 TBXAS1P24557 533 aaPredicted RBP15.39■□□□□ 0.05
CLN6-215ENST00000636674 GNA15P30679 374 aa15.39■□□□□ 0.05
CLN6-215ENST00000636674 GBP2P32456 591 aaPredicted RBP15.39■□□□□ 0.05
CLN6-215ENST00000636674 CCNG1P51959 295 aa15.39■□□□□ 0.05
CLN6-215ENST00000636674 MOGSQ13724 837 aa15.39■□□□□ 0.05
CLN6-215ENST00000636674 SPARCL1Q14515 664 aa15.39■□□□□ 0.05
CLN6-215ENST00000636674 MORF4L2Q15014 288 aa15.39■□□□□ 0.05
CLN6-215ENST00000636674 DAB2IPQ5VWQ8 1189 aa15.39■□□□□ 0.05
CLN6-215ENST00000636674 NLRX1Q86UT6 975 aa15.39■□□□□ 0.05
CLN6-215ENST00000636674 ALLCQ8N6M5 410 aa15.39■□□□□ 0.05
CLN6-215ENST00000636674 FEZF2Q8TBJ5 459 aa15.39■□□□□ 0.05
CLN6-215ENST00000636674 BICD1Q96G01 975 aa15.39■□□□□ 0.05
CLN6-215ENST00000636674 SLITRK1Q96PX8 696 aa15.39■□□□□ 0.05
CLN6-215ENST00000636674 RAB3IPQ96QF0 476 aaPredicted RBP15.39■□□□□ 0.05
CLN6-215ENST00000636674 FNBP1Q96RU3 617 aa15.39■□□□□ 0.05
CLN6-215ENST00000636674 LRMDAQ9H2I8 198 aa15.39■□□□□ 0.05
CLN6-215ENST00000636674 BATF3Q9NR55 127 aa15.39■□□□□ 0.05
CLN6-215ENST00000636674 PARVAQ9NVD7 372 aa15.39■□□□□ 0.05
CLN6-215ENST00000636674 GABBR1Q9UBS5 961 aa15.39■□□□□ 0.05
CLN6-215ENST00000636674 DRG1Q9Y295 367 aaKnown RBP15.39■□□□□ 0.05
CLN6-215ENST00000636674 L3MBTL1Q9Y468 752 aa15.39■□□□□ 0.05
CLN6-215ENST00000636674 TESPA1A2RU30 521 aaPredicted RBP15.38■□□□□ 0.05
CLN6-215ENST00000636674 ZBED4O75132 1171 aa15.38■□□□□ 0.05
CLN6-215ENST00000636674 CD58P19256 250 aa15.38■□□□□ 0.05
CLN6-215ENST00000636674 CLNS1AP54105 237 aaKnown RBP15.38■□□□□ 0.05
CLN6-215ENST00000636674 C2CD6Q53TS8 623 aa15.38■□□□□ 0.05
CLN6-215ENST00000636674 SEPT14Q6ZU15 432 aa15.38■□□□□ 0.05
CLN6-215ENST00000636674 KIF2BQ8N4N8 673 aa15.38■□□□□ 0.05
CLN6-215ENST00000636674 ANKRD27Q96NW4 1050 aa15.38■□□□□ 0.05
CLN6-215ENST00000636674 SSU72Q9NP77 194 aaKnown RBP15.38■□□□□ 0.05
CLN6-215ENST00000636674 SAYSD1Q9NPB0 183 aa15.38■□□□□ 0.05
CLN6-215ENST00000636674 GINM1Q9NU53 330 aa15.38■□□□□ 0.05
CLN6-215ENST00000636674 FETUBQ9UGM5 382 aa15.38■□□□□ 0.05
CLN6-215ENST00000636674 SHOC2Q9UQ13 582 aa15.38■□□□□ 0.05
CLN6-215ENST00000636674 USH1CQ9Y6N9 552 aa15.38■□□□□ 0.05
CLN6-215ENST00000636674 TJP3O95049 919 aa15.38■□□□□ 0.05
CLN6-215ENST00000636674 CCND2P30279 289 aa15.38■□□□□ 0.05
CLN6-215ENST00000636674 LIG4P49917 911 aa15.38■□□□□ 0.05
CLN6-215ENST00000636674 SOX10P56693 466 aa15.38■□□□□ 0.05
CLN6-215ENST00000636674 PDK4Q16654 411 aa15.38■□□□□ 0.05
CLN6-215ENST00000636674 ARHGEF16Q5VV41 709 aa15.38■□□□□ 0.05
CLN6-215ENST00000636674 CYP4F22Q6NT55 531 aa15.38■□□□□ 0.05
CLN6-215ENST00000636674 GSTA5Q7RTV2 222 aa15.38■□□□□ 0.05
CLN6-215ENST00000636674 PHLDB2Q86SQ0 1253 aa15.38■□□□□ 0.05
CLN6-215ENST00000636674 VSIG10LQ86VR7 867 aa15.38■□□□□ 0.05
CLN6-215ENST00000636674 ZBED3Q96IU2 234 aaPredicted RBP15.38■□□□□ 0.05
CLN6-215ENST00000636674 APOBEC3GQ9HC16 384 aaKnown RBP15.38■□□□□ 0.05
CLN6-215ENST00000636674 HOMER2Q9NSB8 354 aa15.38■□□□□ 0.05
CLN6-215ENST00000636674 SLC24A2Q9UI40 661 aa15.38■□□□□ 0.05
CLN6-215ENST00000636674 PTPRJQ12913 1337 aa15.37■□□□□ 0.05
CLN6-215ENST00000636674 PSAPP07602 524 aa15.37■□□□□ 0.05
CLN6-215ENST00000636674 CFHP08603 1231 aa15.37■□□□□ 0.05
CLN6-215ENST00000636674 KCNA2P16389 499 aa15.37■□□□□ 0.05
CLN6-215ENST00000636674 TNNI1P19237 187 aa15.37■□□□□ 0.05
CLN6-215ENST00000636674 MMP8P22894 467 aa15.37■□□□□ 0.05
CLN6-215ENST00000636674 ZNF132P52740 706 aa15.37■□□□□ 0.05
CLN6-215ENST00000636674 WNT7BP56706 349 aa15.37■□□□□ 0.05
CLN6-215ENST00000636674 ATP11AP98196 1134 aa15.37■□□□□ 0.05
CLN6-215ENST00000636674 SMYD5Q6GMV2 418 aa15.37■□□□□ 0.05
CLN6-215ENST00000636674 TRMT1LQ7Z2T5 733 aaKnown RBP15.37■□□□□ 0.05
CLN6-215ENST00000636674 RBBP8NLQ8NC74 664 aaPredicted RBP15.37■□□□□ 0.05
CLN6-215ENST00000636674 INPP5DQ92835 1189 aa15.37■□□□□ 0.05
CLN6-215ENST00000636674 NKD2Q969F2 451 aaPredicted RBP15.37■□□□□ 0.05
CLN6-215ENST00000636674 FAM84AQ96KN4 292 aa15.37■□□□□ 0.05
CLN6-215ENST00000636674 TMEM237Q96Q45 408 aa15.37■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms