RNA–Protein interactions for RNA: ENST00000631020.2

PNKP-224, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5 BASIC

Gene PNKP, Length 1,545 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-224ENST00000631020 MTHFRP42898 656 aa20.1■□□□□ 0.81
PNKP-224ENST00000631020 CLCNKBP51801 687 aa20.1■□□□□ 0.81
PNKP-224ENST00000631020 UPP1Q16831 310 aa20.1■□□□□ 0.81
PNKP-224ENST00000631020 DUOXA2Q1HG44 320 aa20.1■□□□□ 0.81
PNKP-224ENST00000631020 LUZP1Q86V48 1076 aa20.1■□□□□ 0.81
PNKP-224ENST00000631020 CREBRFQ8IUR6 639 aa20.1■□□□□ 0.81
PNKP-224ENST00000631020 C1orf127Q8N9H9 656 aa20.1■□□□□ 0.81
PNKP-224ENST00000631020 BEST2Q8NFU1 509 aa20.1■□□□□ 0.81
PNKP-224ENST00000631020 CACTINQ8WUQ7 758 aaKnown RBP20.1■□□□□ 0.81
PNKP-224ENST00000631020 SLC35C1Q96A29 364 aa20.1■□□□□ 0.81
PNKP-224ENST00000631020 RIPOR3Q96MK2 946 aa20.1■□□□□ 0.81
PNKP-224ENST00000631020 RXFP1Q9HBX9 757 aa20.1■□□□□ 0.81
PNKP-224ENST00000631020 CHST7Q9NS84 486 aa20.1■□□□□ 0.81
PNKP-224ENST00000631020 PPEF2O14830 753 aa20.09■□□□□ 0.81
PNKP-224ENST00000631020 C4BPAP04003 597 aaKnown RBP20.09■□□□□ 0.81
PNKP-224ENST00000631020 EPCAMP16422 314 aa20.09■□□□□ 0.81
PNKP-224ENST00000631020 ZNF18P17022 549 aa20.09■□□□□ 0.81
PNKP-224ENST00000631020 LRPAP1P30533 357 aa20.09■□□□□ 0.81
PNKP-224ENST00000631020 GLUD2P49448 558 aa20.09■□□□□ 0.81
PNKP-224ENST00000631020 CLCN4P51793 760 aa20.09■□□□□ 0.81
PNKP-224ENST00000631020 DSG1Q02413 1049 aa20.09■□□□□ 0.81
PNKP-224ENST00000631020 DCAF17Q5H9S7 520 aaPredicted RBP20.09■□□□□ 0.81
PNKP-224ENST00000631020 KIAA0319Q5VV43 1072 aa20.09■□□□□ 0.81
PNKP-224ENST00000631020 CD300LGQ6UXG3 332 aa20.09■□□□□ 0.81
PNKP-224ENST00000631020 C15orf39Q6ZRI6 1047 aa20.09■□□□□ 0.81
PNKP-224ENST00000631020 TRAPPC11Q7Z392 1133 aa20.09■□□□□ 0.81
PNKP-224ENST00000631020 MUTYHQ9UIF7 546 aa20.09■□□□□ 0.81
PNKP-224ENST00000631020 SIX4Q9UIU6 781 aa20.09■□□□□ 0.81
PNKP-224ENST00000631020 ADAM28Q9UKQ2 775 aa20.09■□□□□ 0.81
PNKP-224ENST00000631020 NR2E1Q9Y466 385 aa20.09■□□□□ 0.81
PNKP-224ENST00000631020 ANO9A1A5B4 782 aa20.08■□□□□ 0.81
PNKP-224ENST00000631020 SMTNL1A8MU46 457 aa20.08■□□□□ 0.81
PNKP-224ENST00000631020 KCNJ18B7U540 433 aa20.08■□□□□ 0.81
PNKP-224ENST00000631020 XPOTO43592 962 aaKnown RBP20.08■□□□□ 0.81
PNKP-224ENST00000631020 ADH1AP07327 375 aa20.08■□□□□ 0.81
PNKP-224ENST00000631020 TMEM191BP0C7N4 346 aa20.08■□□□□ 0.81
PNKP-224ENST00000631020 KLRC2P26717 231 aa20.08■□□□□ 0.81
PNKP-224ENST00000631020 GCLMP48507 274 aa20.08■□□□□ 0.81
PNKP-224ENST00000631020 KCNJ12Q14500 433 aa20.08■□□□□ 0.81
PNKP-224ENST00000631020 TCERG1LQ5VWI1 586 aa20.08■□□□□ 0.81
PNKP-224ENST00000631020 TDRD10Q5VZ19 366 aaKnown RBP20.08■□□□□ 0.81
PNKP-224ENST00000631020 KIAA1841Q6NSI8 718 aa20.08■□□□□ 0.81
PNKP-224ENST00000631020 FUT10Q6P4F1 479 aa20.08■□□□□ 0.81
PNKP-224ENST00000631020 SV2AQ7L0J3 742 aa20.08■□□□□ 0.81
PNKP-224ENST00000631020 C3orf58Q8NDZ4 430 aa20.08■□□□□ 0.81
PNKP-224ENST00000631020 FAM200AQ8TCP9 573 aa20.08■□□□□ 0.81
PNKP-224ENST00000631020 ANKRD36BP1Q96IX9 119 aa20.08■□□□□ 0.81
PNKP-224ENST00000631020 RPGRIP1Q96KN7 1286 aa20.08■□□□□ 0.81
PNKP-224ENST00000631020 SFXN1Q9H9B4 322 aa20.08■□□□□ 0.81
PNKP-224ENST00000631020 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP20.08■□□□□ 0.81
PNKP-224ENST00000631020 DPP7Q9UHL4 492 aa20.08■□□□□ 0.81
PNKP-224ENST00000631020 DENND4AQ7Z401 1863 aa20.07■□□□□ 0.8
PNKP-224ENST00000631020 FAM86C2PA6NEL3 165 aa20.07■□□□□ 0.8
PNKP-224ENST00000631020 PODXLO00592 558 aa20.07■□□□□ 0.8
PNKP-224ENST00000631020 PIRO00625 290 aa20.07■□□□□ 0.8
PNKP-224ENST00000631020 CST3P01034 146 aaPredicted RBP20.07■□□□□ 0.8
PNKP-224ENST00000631020 TNNC2P02585 160 aa20.07■□□□□ 0.8
PNKP-224ENST00000631020 RPL9P32969 192 aaKnown RBP20.07■□□□□ 0.8
PNKP-224ENST00000631020 USP41Q3LFD5 358 aa20.07■□□□□ 0.8
PNKP-224ENST00000631020 ZACNQ401N2 412 aa20.07■□□□□ 0.8
PNKP-224ENST00000631020 TCP11X2Q5H9J9 407 aa20.07■□□□□ 0.8
PNKP-224ENST00000631020 C9orf57Q5W0N0 161 aa20.07■□□□□ 0.8
PNKP-224ENST00000631020 USP37Q86T82 979 aa20.07■□□□□ 0.8
PNKP-224ENST00000631020 FAM114A1Q8IWE2 563 aa20.07■□□□□ 0.8
PNKP-224ENST00000631020 DDX27Q96GQ7 796 aaKnown RBP20.07■□□□□ 0.8
PNKP-224ENST00000631020 UROC1Q96N76 676 aa20.07■□□□□ 0.8
PNKP-224ENST00000631020 MMRN2Q9H8L6 949 aa20.07■□□□□ 0.8
PNKP-224ENST00000631020 HCN4Q9Y3Q4 1203 aa20.07■□□□□ 0.8
PNKP-224ENST00000631020 MTCL1Q9Y4B5 1905 aaKnown RBP20.07■□□□□ 0.8
PNKP-224ENST00000631020 VNN1O95497 513 aa20.07■□□□□ 0.8
PNKP-224ENST00000631020 ITGB3P05106 788 aa20.07■□□□□ 0.8
PNKP-224ENST00000631020 AP3M2P53677 418 aa20.07■□□□□ 0.8
PNKP-224ENST00000631020 CREMQ03060 361 aa20.07■□□□□ 0.8
PNKP-224ENST00000631020 CBWD6Q4V339 395 aa20.07■□□□□ 0.8
PNKP-224ENST00000631020 CBWD3Q5JTY5 395 aa20.07■□□□□ 0.8
PNKP-224ENST00000631020 CBWD5Q5RIA9 395 aa20.07■□□□□ 0.8
PNKP-224ENST00000631020 ATAT1Q5SQI0 421 aa20.07■□□□□ 0.8
PNKP-224ENST00000631020 ELMSAN1Q6PJG2 1045 aa20.07■□□□□ 0.8
PNKP-224ENST00000631020 DCLRE1AQ6PJP8 1040 aa20.07■□□□□ 0.8
PNKP-224ENST00000631020 TAS1R1Q7RTX1 841 aa20.07■□□□□ 0.8
PNKP-224ENST00000631020 GAS2L3Q86XJ1 694 aa20.07■□□□□ 0.8
PNKP-224ENST00000631020 EDAQ92838 391 aa20.07■□□□□ 0.8
PNKP-224ENST00000631020 APOL5Q9BWW9 433 aa20.07■□□□□ 0.8
PNKP-224ENST00000631020 RHOBTB2Q9BYZ6 727 aa20.07■□□□□ 0.8
PNKP-224ENST00000631020 FNIP2Q9P278 1114 aa20.07■□□□□ 0.8
PNKP-224ENST00000631020 MAGEC2Q9UBF1 373 aaPredicted RBP20.07■□□□□ 0.8
PNKP-224ENST00000631020 ITGA11Q9UKX5 1188 aa20.07■□□□□ 0.8
PNKP-224ENST00000631020 SF3B1O75533 1304 aaKnown RBP eCLIP20.06■□□□□ 0.87e-7■■■■■ 86
PNKP-224ENST00000631020 PLXNA3P51805 1871 aa20.06■□□□□ 0.8
PNKP-224ENST00000631020 BECN2A8MW95 431 aa20.06■□□□□ 0.8
PNKP-224ENST00000631020 TEX28O15482 410 aa20.06■□□□□ 0.8
PNKP-224ENST00000631020 B3GAT3O94766 335 aa20.06■□□□□ 0.8
PNKP-224ENST00000631020 KIF4AO95239 1232 aa20.06■□□□□ 0.8
PNKP-224ENST00000631020 ATP1A3P13637 1013 aa20.06■□□□□ 0.8
PNKP-224ENST00000631020 EEF1GP26641 437 aaKnown RBP20.06■□□□□ 0.8
PNKP-224ENST00000631020 POLR2BP30876 1174 aaKnown RBP20.06■□□□□ 0.8
PNKP-224ENST00000631020 GTF2H1P32780 548 aa20.06■□□□□ 0.8
PNKP-224ENST00000631020 MTIF2P46199 727 aaKnown RBP20.06■□□□□ 0.8
PNKP-224ENST00000631020 RARS2Q5T160 578 aaKnown RBP20.06■□□□□ 0.8
PNKP-224ENST00000631020 CMASQ8NFW8 434 aaPredicted RBP20.06■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms