RNA–Protein interactions for RNA: ENST00000628566.2

NR1I3-235, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 5 BASIC

Gene NR1I3, Length 1,201 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-235ENST00000628566 CCDC192P0DO97 292 aa8.39□□□□□ -1.07
NR1I3-235ENST00000628566 PCSK1P29120 753 aa8.39□□□□□ -1.07
NR1I3-235ENST00000628566 PIK3CAP42336 1068 aa8.39□□□□□ -1.07
NR1I3-235ENST00000628566 LHX1P48742 406 aa8.39□□□□□ -1.07
NR1I3-235ENST00000628566 ARPP19P56211 112 aa8.39□□□□□ -1.07
NR1I3-235ENST00000628566 CLDN10P78369 228 aa8.39□□□□□ -1.07
NR1I3-235ENST00000628566 TSPY1Q01534 308 aa8.39□□□□□ -1.07
NR1I3-235ENST00000628566 TFF2Q03403 129 aa8.39□□□□□ -1.07
NR1I3-235ENST00000628566 PLD1Q13393 1074 aa8.39□□□□□ -1.07
NR1I3-235ENST00000628566 SGSM1Q2NKQ1 1148 aa8.39□□□□□ -1.07
NR1I3-235ENST00000628566 UVSSAQ2YD98 709 aa8.39□□□□□ -1.07
NR1I3-235ENST00000628566 ZNF699Q32M78 642 aa8.39□□□□□ -1.07
NR1I3-235ENST00000628566 CCDC40Q4G0X9 1142 aa8.39□□□□□ -1.07
NR1I3-235ENST00000628566 ZCWPW2Q504Y3 356 aa8.39□□□□□ -1.07
NR1I3-235ENST00000628566 CT47A1Q5JQC4 288 aaPredicted RBP8.39□□□□□ -1.07
NR1I3-235ENST00000628566 PPM1LQ5SGD2 360 aa8.39□□□□□ -1.07
NR1I3-235ENST00000628566 TCERG1LQ5VWI1 586 aa8.39□□□□□ -1.07
NR1I3-235ENST00000628566 LMBRD2Q68DH5 695 aaPredicted RBP8.39□□□□□ -1.07
NR1I3-235ENST00000628566 ANKRD40Q6AI12 368 aa8.39□□□□□ -1.07
NR1I3-235ENST00000628566 SLC8B1Q6J4K2 584 aa8.39□□□□□ -1.07
NR1I3-235ENST00000628566 SASS6Q6UVJ0 657 aa8.39□□□□□ -1.07
NR1I3-235ENST00000628566 DCP1BQ8IZD4 617 aaKnown RBP8.39□□□□□ -1.07
NR1I3-235ENST00000628566 TOP6BLQ8N6T0 577 aa8.39□□□□□ -1.07
NR1I3-235ENST00000628566 SMRP1Q8NCR6 262 aa8.39□□□□□ -1.07
NR1I3-235ENST00000628566 KREMEN2Q8NCW0 462 aa8.39□□□□□ -1.07
NR1I3-235ENST00000628566 CMASQ8NFW8 434 aaPredicted RBP8.39□□□□□ -1.07
NR1I3-235ENST00000628566 ZNF461Q8TAF7 563 aa8.39□□□□□ -1.07
NR1I3-235ENST00000628566 SLC22A17Q8WUG5 538 aa8.39□□□□□ -1.07
NR1I3-235ENST00000628566 NELFBQ8WX92 580 aa8.39□□□□□ -1.07
NR1I3-235ENST00000628566 TAF4BQ92750 862 aa8.39□□□□□ -1.07
NR1I3-235ENST00000628566 MSLNLQ96KJ4 702 aa8.39□□□□□ -1.07
NR1I3-235ENST00000628566 MMS19Q96T76 1030 aa8.39□□□□□ -1.07
NR1I3-235ENST00000628566 CLSTN3Q9BQT9 956 aa8.39□□□□□ -1.07
NR1I3-235ENST00000628566 ADAM7Q9H2U9 754 aa8.39□□□□□ -1.07
NR1I3-235ENST00000628566 PRDM6Q9NQX0 595 aa8.39□□□□□ -1.07
NR1I3-235ENST00000628566 GDAP2Q9NXN4 497 aa8.39□□□□□ -1.07
NR1I3-235ENST00000628566 PRKAG3Q9UGI9 489 aa8.39□□□□□ -1.07
NR1I3-235ENST00000628566 ARMCX3Q9UH62 379 aaPredicted RBP8.39□□□□□ -1.07
NR1I3-235ENST00000628566 RWDD2AQ9UIY3 292 aa8.39□□□□□ -1.07
NR1I3-235ENST00000628566 FBXL5Q9UKA1 691 aa8.39□□□□□ -1.07
NR1I3-235ENST00000628566 CTNND2Q9UQB3 1225 aa8.39□□□□□ -1.07
NR1I3-235ENST00000628566 SNX9Q9Y5X1 595 aa8.39□□□□□ -1.07
NR1I3-235ENST00000628566 CCDC195A0A1B0GUA6 201 aa8.38□□□□□ -1.07
NR1I3-235ENST00000628566 GRXCR2A6NFK2 248 aa8.38□□□□□ -1.07
NR1I3-235ENST00000628566 LRRIQ3A6PVS8 624 aaPredicted RBP8.38□□□□□ -1.07
NR1I3-235ENST00000628566 MBTPS2O43462 519 aa8.38□□□□□ -1.07
NR1I3-235ENST00000628566 N4BP1O75113 896 aaKnown RBP8.38□□□□□ -1.07
NR1I3-235ENST00000628566 ZMYND10O75800 440 aa8.38□□□□□ -1.07
NR1I3-235ENST00000628566 AKAP3O75969 853 aa8.38□□□□□ -1.07
NR1I3-235ENST00000628566 STAU1O95793 577 aaKnown RBP8.38□□□□□ -1.07
NR1I3-235ENST00000628566 GLP2RO95838 553 aa8.38□□□□□ -1.07
NR1I3-235ENST00000628566 LRG1P02750 347 aa8.38□□□□□ -1.07
NR1I3-235ENST00000628566 C8AP07357 584 aa8.38□□□□□ -1.07
NR1I3-235ENST00000628566 PRKCSHP14314 528 aaPredicted RBP8.38□□□□□ -1.07
NR1I3-235ENST00000628566 ATF2P15336 505 aa8.38□□□□□ -1.07
NR1I3-235ENST00000628566 EPCAMP16422 314 aa8.38□□□□□ -1.07
NR1I3-235ENST00000628566 RPL17P18621 184 aaKnown RBP8.38□□□□□ -1.07
NR1I3-235ENST00000628566 HOXA9P31269 272 aa8.38□□□□□ -1.07
NR1I3-235ENST00000628566 LTBRP36941 435 aa8.38□□□□□ -1.07
NR1I3-235ENST00000628566 CASP4P49662 377 aa8.38□□□□□ -1.07
NR1I3-235ENST00000628566 NCOA4Q13772 614 aa8.38□□□□□ -1.07
NR1I3-235ENST00000628566 KCNC3Q14003 757 aa8.38□□□□□ -1.07
NR1I3-235ENST00000628566 MRPL58Q14197 206 aaKnown RBP8.38□□□□□ -1.07
NR1I3-235ENST00000628566 MAPRE1Q15691 268 aaKnown RBP8.38□□□□□ -1.07
NR1I3-235ENST00000628566 CLUL1Q15846 466 aa8.38□□□□□ -1.07
NR1I3-235ENST00000628566 NFE2Q16621 373 aaPredicted RBP8.38□□□□□ -1.07
NR1I3-235ENST00000628566 WDR72Q3MJ13 1102 aa8.38□□□□□ -1.07
NR1I3-235ENST00000628566 DCAF17Q5H9S7 520 aaPredicted RBP8.38□□□□□ -1.07
NR1I3-235ENST00000628566 ZNF667Q5HYK9 610 aa8.38□□□□□ -1.07
NR1I3-235ENST00000628566 WDR44Q5JSH3 913 aa8.38□□□□□ -1.07
NR1I3-235ENST00000628566 RARS2Q5T160 578 aaKnown RBP8.38□□□□□ -1.07
NR1I3-235ENST00000628566 CCDC183Q5T5S1 534 aa8.38□□□□□ -1.07
NR1I3-235ENST00000628566 KRT39Q6A163 491 aa8.38□□□□□ -1.07
NR1I3-235ENST00000628566 CD300LGQ6UXG3 332 aa8.38□□□□□ -1.07
NR1I3-235ENST00000628566 FILIP1Q7Z7B0 1213 aa8.38□□□□□ -1.07
NR1I3-235ENST00000628566 FAM114A1Q8IWE2 563 aa8.38□□□□□ -1.07
NR1I3-235ENST00000628566 ADGRF2Q8IZF7 708 aa8.38□□□□□ -1.07
NR1I3-235ENST00000628566 ZSWIM2Q8NEG5 633 aa8.38□□□□□ -1.07
NR1I3-235ENST00000628566 OR5B17Q8NGF7 314 aa8.38□□□□□ -1.07
NR1I3-235ENST00000628566 C2orf15Q8WU43 125 aaKnown RBP8.38□□□□□ -1.07
NR1I3-235ENST00000628566 RHOBTB2Q9BYZ6 727 aa8.38□□□□□ -1.07
NR1I3-235ENST00000628566 SNX25Q9H3E2 840 aa8.38□□□□□ -1.07
NR1I3-235ENST00000628566 TMEM8AQ9HCN3 771 aa8.38□□□□□ -1.07
NR1I3-235ENST00000628566 CLEC1BQ9P126 229 aa8.38□□□□□ -1.07
NR1I3-235ENST00000628566 MAGEC2Q9UBF1 373 aaPredicted RBP8.38□□□□□ -1.07
NR1I3-235ENST00000628566 AFF4Q9UHB7 1163 aaKnown RBP8.38□□□□□ -1.07
NR1I3-235ENST00000628566 FBXW11Q9UKB1 542 aa8.38□□□□□ -1.07
NR1I3-235ENST00000628566 NR2E1Q9Y466 385 aa8.38□□□□□ -1.07
NR1I3-235ENST00000628566 ANK1P16157 1881 aa8.38□□□□□ -1.07
NR1I3-235ENST00000628566 ATG2AQ2TAZ0 1938 aa8.37□□□□□ -1.07
NR1I3-235ENST00000628566 PPEF2O14830 753 aa8.37□□□□□ -1.07
NR1I3-235ENST00000628566 LETM1O95202 739 aaPredicted RBP8.37□□□□□ -1.07
NR1I3-235ENST00000628566 ATXN8OSP0DMR3 200 aa8.37□□□□□ -1.07
NR1I3-235ENST00000628566 ERCC5P28715 1186 aaPredicted RBP8.37□□□□□ -1.07
NR1I3-235ENST00000628566 ALDH1A3P47895 512 aa8.37□□□□□ -1.07
NR1I3-235ENST00000628566 TUFMP49411 452 aaKnown RBP8.37□□□□□ -1.07
NR1I3-235ENST00000628566 MXI1P50539 228 aa8.37□□□□□ -1.07
NR1I3-235ENST00000628566 WNT7BP56706 349 aa8.37□□□□□ -1.07
NR1I3-235ENST00000628566 NLRP12P59046 1061 aa8.37□□□□□ -1.07
NR1I3-235ENST00000628566 ROR1Q01973 937 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms