RNA–Protein interactions for RNA: ENST00000627738.1

SOX2-OT-244, SOX2 overlapping transcript, humanhuman

TSL 5 BASIC

Gene SOX2-OT, Length 692 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-244ENST00000627738 SLC6A16Q9GZN6 736 aa10.65□□□□□ -0.7
SOX2-OT-244ENST00000627738 XYLT2Q9H1B5 865 aa10.65□□□□□ -0.7
SOX2-OT-244ENST00000627738 FAM105AQ9NUU6 356 aa10.65□□□□□ -0.7
SOX2-OT-244ENST00000627738 RNF19AQ9NV58 838 aa10.65□□□□□ -0.7
SOX2-OT-244ENST00000627738 DPP3Q9NY33 737 aa10.65□□□□□ -0.7
SOX2-OT-244ENST00000627738 KLK14Q9P0G3 267 aa10.65□□□□□ -0.7
SOX2-OT-244ENST00000627738 CNTN3Q9P232 1028 aa10.65□□□□□ -0.7
SOX2-OT-244ENST00000627738 MAP10Q9P2G4 905 aa10.65□□□□□ -0.7
SOX2-OT-244ENST00000627738 DERAQ9Y315 318 aa10.65□□□□□ -0.7
SOX2-OT-244ENST00000627738 PCDHB2Q9Y5E7 798 aa10.65□□□□□ -0.7
SOX2-OT-244ENST00000627738 RALGAPA2Q2PPJ7 1873 aa10.64□□□□□ -0.71
SOX2-OT-244ENST00000627738 CITO14578 2027 aa10.64□□□□□ -0.71
SOX2-OT-244ENST00000627738 KIF2AO00139 706 aaPredicted RBP10.64□□□□□ -0.71
SOX2-OT-244ENST00000627738 DDX3XO00571 662 aaKnown RBP eCLIP10.64□□□□□ -0.71
SOX2-OT-244ENST00000627738 SGPL1O95470 568 aa10.64□□□□□ -0.71
SOX2-OT-244ENST00000627738 CCNYL3P0C7X3 344 aa10.64□□□□□ -0.71
SOX2-OT-244ENST00000627738 ACO1P21399 889 aaKnown RBP10.64□□□□□ -0.71
SOX2-OT-244ENST00000627738 TNFAIP3P21580 790 aa10.64□□□□□ -0.71
SOX2-OT-244ENST00000627738 POLR2BP30876 1174 aaKnown RBP10.64□□□□□ -0.71
SOX2-OT-244ENST00000627738 RBP5P82980 135 aa10.64□□□□□ -0.71
SOX2-OT-244ENST00000627738 BMS1Q14692 1282 aaKnown RBP10.64□□□□□ -0.71
SOX2-OT-244ENST00000627738 CCDC122Q5T0U0 273 aa10.64□□□□□ -0.71
SOX2-OT-244ENST00000627738 FBXO46Q6PJ61 603 aaPredicted RBP10.64□□□□□ -0.71
SOX2-OT-244ENST00000627738 SYT10Q6XYQ8 523 aa10.64□□□□□ -0.71
SOX2-OT-244ENST00000627738 ZNF662Q6ZS27 426 aa10.64□□□□□ -0.71
SOX2-OT-244ENST00000627738 SLC47A2Q86VL8 602 aa10.64□□□□□ -0.71
SOX2-OT-244ENST00000627738 UBR7Q8N806 425 aa10.64□□□□□ -0.71
SOX2-OT-244ENST00000627738 OLIG1Q8TAK6 271 aa10.64□□□□□ -0.71
SOX2-OT-244ENST00000627738 U2AF1L4Q8WU68 220 aaKnown RBP10.64□□□□□ -0.71
SOX2-OT-244ENST00000627738 SLC20A1Q8WUM9 679 aa10.64□□□□□ -0.71
SOX2-OT-244ENST00000627738 ZNF592Q92610 1267 aa10.64□□□□□ -0.71
SOX2-OT-244ENST00000627738 TAF4BQ92750 862 aa10.64□□□□□ -0.71
SOX2-OT-244ENST00000627738 ZNF333Q96JL9 665 aa10.64□□□□□ -0.71
SOX2-OT-244ENST00000627738 NIF3L1Q9GZT8 377 aa10.64□□□□□ -0.71
SOX2-OT-244ENST00000627738 LACRTQ9GZZ8 138 aa10.64□□□□□ -0.71
SOX2-OT-244ENST00000627738 ACP6Q9NPH0 428 aa10.64□□□□□ -0.71
SOX2-OT-244ENST00000627738 SEPT11Q9NVA2 429 aaKnown RBP10.64□□□□□ -0.71
SOX2-OT-244ENST00000627738 TRIM10Q9UDY6 481 aa10.64□□□□□ -0.71
SOX2-OT-244ENST00000627738 TUBGCP4Q9UGJ1 667 aa10.64□□□□□ -0.71
SOX2-OT-244ENST00000627738 ITGA11Q9UKX5 1188 aa10.64□□□□□ -0.71
SOX2-OT-244ENST00000627738 NENFQ9UMX5 172 aa10.64□□□□□ -0.71
SOX2-OT-244ENST00000627738 POLIQ9UNA4 740 aa10.64□□□□□ -0.71
SOX2-OT-244ENST00000627738 AGAP1Q9UPQ3 857 aa10.64□□□□□ -0.71
SOX2-OT-244ENST00000627738 R3HCC1Q9Y3T6 440 aaKnown RBP10.64□□□□□ -0.71
SOX2-OT-244ENST00000627738 PCDHB4Q9Y5E5 795 aa10.64□□□□□ -0.71
SOX2-OT-244ENST00000627738 SQORQ9Y6N5 450 aa10.64□□□□□ -0.71
SOX2-OT-244ENST00000627738 SMIM28A0A1B0GU29 152 aa10.63□□□□□ -0.71
SOX2-OT-244ENST00000627738 PJA2O43164 708 aa10.63□□□□□ -0.71
SOX2-OT-244ENST00000627738 KRT86O43790 486 aa10.63□□□□□ -0.71
SOX2-OT-244ENST00000627738 KIF5CO60282 957 aa10.63□□□□□ -0.71
SOX2-OT-244ENST00000627738 MGEA5O60502 916 aa10.63□□□□□ -0.71
SOX2-OT-244ENST00000627738 TFRCP02786 760 aaKnown RBP10.63□□□□□ -0.71
SOX2-OT-244ENST00000627738 TUBB4AP04350 444 aa10.63□□□□□ -0.71
SOX2-OT-244ENST00000627738 ITGA4P13612 1032 aa10.63□□□□□ -0.71
SOX2-OT-244ENST00000627738 KCNE1P15382 129 aa10.63□□□□□ -0.71
SOX2-OT-244ENST00000627738 CYP11B1P15538 503 aa10.63□□□□□ -0.71
SOX2-OT-244ENST00000627738 CHRNB2P17787 502 aa10.63□□□□□ -0.71
SOX2-OT-244ENST00000627738 ATICP31939 592 aa10.63□□□□□ -0.71
SOX2-OT-244ENST00000627738 ASPAP45381 313 aa10.63□□□□□ -0.71
SOX2-OT-244ENST00000627738 PDE6CP51160 858 aa10.63□□□□□ -0.71
SOX2-OT-244ENST00000627738 LBX1P52954 281 aa10.63□□□□□ -0.71
SOX2-OT-244ENST00000627738 GNG11P61952 73 aa10.63□□□□□ -0.71
SOX2-OT-244ENST00000627738 ETF1P62495 437 aaKnown RBP10.63□□□□□ -0.71
SOX2-OT-244ENST00000627738 KIF5AQ12840 1032 aa10.63□□□□□ -0.71
SOX2-OT-244ENST00000627738 DSC3Q14574 896 aa10.63□□□□□ -0.71
SOX2-OT-244ENST00000627738 MBTPS1Q14703 1052 aa10.63□□□□□ -0.71
SOX2-OT-244ENST00000627738 NAB2Q15742 525 aa10.63□□□□□ -0.71
SOX2-OT-244ENST00000627738 ZBTB6Q15916 424 aa10.63□□□□□ -0.71
SOX2-OT-244ENST00000627738 XKR4Q5GH76 650 aa10.63□□□□□ -0.71
SOX2-OT-244ENST00000627738 ZNF667Q5HYK9 610 aa10.63□□□□□ -0.71
SOX2-OT-244ENST00000627738 C10orf76Q5T2E6 689 aa10.63□□□□□ -0.71
SOX2-OT-244ENST00000627738 TAF3Q5VWG9 929 aa10.63□□□□□ -0.71
SOX2-OT-244ENST00000627738 ZNF787Q6DD87 383 aa10.63□□□□□ -0.71
SOX2-OT-244ENST00000627738 ALKBH5Q6P6C2 394 aaKnown RBP10.63□□□□□ -0.71
SOX2-OT-244ENST00000627738 TMEM270Q6UE05 265 aa10.63□□□□□ -0.71
SOX2-OT-244ENST00000627738 SCARA5Q6ZMJ2 495 aa10.63□□□□□ -0.71
SOX2-OT-244ENST00000627738 PDZRN4Q6ZMN7 1036 aaPredicted RBP10.63□□□□□ -0.71
SOX2-OT-244ENST00000627738 NOP9Q86U38 636 aaKnown RBP10.63□□□□□ -0.71
SOX2-OT-244ENST00000627738 GLYCTKQ8IVS8 523 aa10.63□□□□□ -0.71
SOX2-OT-244ENST00000627738 FAM126BQ8IXS8 530 aa10.63□□□□□ -0.71
SOX2-OT-244ENST00000627738 HACE1Q8IYU2 909 aa10.63□□□□□ -0.71
SOX2-OT-244ENST00000627738 RPUSD2Q8IZ73 545 aaKnown RBP10.63□□□□□ -0.71
SOX2-OT-244ENST00000627738 TXLNBQ8N3L3 684 aa10.63□□□□□ -0.71
SOX2-OT-244ENST00000627738 USP38Q8NB14 1042 aa10.63□□□□□ -0.71
SOX2-OT-244ENST00000627738 BEST2Q8NFU1 509 aa10.63□□□□□ -0.71
SOX2-OT-244ENST00000627738 SLC30A5Q8TAD4 765 aa10.63□□□□□ -0.71
SOX2-OT-244ENST00000627738 CAGE1Q8TC20 777 aa10.63□□□□□ -0.71
SOX2-OT-244ENST00000627738 C18orf25Q96B23 403 aaPredicted RBP10.63□□□□□ -0.71
SOX2-OT-244ENST00000627738 HPDLQ96IR7 371 aa10.63□□□□□ -0.71
SOX2-OT-244ENST00000627738 TSGA10Q9BZW7 698 aa10.63□□□□□ -0.71
SOX2-OT-244ENST00000627738 LUC7LQ9NQ29 371 aaKnown RBP10.63□□□□□ -0.71
SOX2-OT-244ENST00000627738 NXF1Q9UBU9 619 aaKnown RBP10.63□□□□□ -0.71
SOX2-OT-244ENST00000627738 DNAI1Q9UI46 699 aa10.63□□□□□ -0.71
SOX2-OT-244ENST00000627738 NAGPAQ9UK23 515 aa10.63□□□□□ -0.71
SOX2-OT-244ENST00000627738 NOCTQ9UK39 431 aaKnown RBP10.63□□□□□ -0.71
SOX2-OT-244ENST00000627738 UBQLN1Q9UMX0 589 aaKnown RBP10.63□□□□□ -0.71
SOX2-OT-244ENST00000627738 GUCA1BQ9UMX6 200 aa10.63□□□□□ -0.71
SOX2-OT-244ENST00000627738 MEIS3P2A8K0S8 358 aa10.62□□□□□ -0.71
SOX2-OT-244ENST00000627738 RNF223E7ERA6 249 aa10.62□□□□□ -0.71
SOX2-OT-244ENST00000627738 PPEF2O14830 753 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms